Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E18
         (218 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99102-1|CAB11776.1|  523|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical pr...    25   5.5  
Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical...    25   7.3  
AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical...    25   7.3  

>Z99102-1|CAB11776.1|  523|Caenorhabditis elegans Hypothetical
           protein B0331.2 protein.
          Length = 523

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 184 WSPLVGAGEMSLP-LYNLSG 128
           W P VGAG ++LP  Y LSG
Sbjct: 43  WGPAVGAGTVTLPQAYFLSG 62


>Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC376.7c protein.
          Length = 474

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 211 SSMIEGSIGWSPLVGAGEMSLPLYNLSGSSPASRNLRI 98
           SS   G   + P++       P +NLS SS AS  LR+
Sbjct: 257 SSPDSGISLYDPMIPPPSSHFPSFNLSSSSSASNLLRL 294


>Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical
           protein ZC376.7b protein.
          Length = 472

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 211 SSMIEGSIGWSPLVGAGEMSLPLYNLSGSSPASRNLRI 98
           SS   G   + P++       P +NLS SS AS  LR+
Sbjct: 255 SSPDSGISLYDPMIPPPSSHFPSFNLSSSSSASNLLRL 292


>Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical
           protein ZC376.7a protein.
          Length = 488

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 211 SSMIEGSIGWSPLVGAGEMSLPLYNLSGSSPASRNLRI 98
           SS   G   + P++       P +NLS SS AS  LR+
Sbjct: 271 SSPDSGISLYDPMIPPPSSHFPSFNLSSSSSASNLLRL 308


>AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical
           protein Y37E3.17a protein.
          Length = 830

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 2   RITDCVNDALGREFLSALHTTNIQTSSDEAHQYSKITGSWR*TTEVVQG 148
           ++ +   D    + L ALHTTN  T S  A   + + G+     +V+ G
Sbjct: 152 QVRELAPDVDHSKILGALHTTNDGTISARALTQALVVGAKNGGAQVIDG 200


>AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical
           protein Y37E3.17b protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 2   RITDCVNDALGREFLSALHTTNIQTSSDEAHQYSKITGSWR*TTEVVQG 148
           ++ +   D    + L ALHTTN  T S  A   + + G+     +V+ G
Sbjct: 159 QVRELAPDVDHSKILGALHTTNDGTISARALTQALVVGAKNGGAQVIDG 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,679,134
Number of Sequences: 27780
Number of extensions: 73571
Number of successful extensions: 211
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)