Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E18
         (218 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   0.43 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   2.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    20   3.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    20   3.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              20   4.0  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               19   5.3  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 0.43
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 202 IEGSIGWSPLVGAGEMSLPLYNL 134
           IEG +   P+ GAG+ ++ +Y+L
Sbjct: 133 IEGKVLLLPVRGAGKSNITMYDL 155


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 2.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 32  GREFLSALHTTNIQTSSDEAHQ 97
           G+E+ +A   T+I  S   AHQ
Sbjct: 786 GKEYYAASFHTDIGNSQSLAHQ 807


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 214 ISSMIEGSIGWSPLVGAGEMSLPLYNLSGSSPASRNLRI 98
           ISS +E  IGW   +G    S+   ++SG   A  N  I
Sbjct: 115 ISSFMERMIGWE--IGCDVYSV-FGSISGMGQAMTNAAI 150


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 214 ISSMIEGSIGWSPLVGAGEMSLPLYNLSGSSPASRNLRI 98
           ISS +E  IGW   +G    S+   ++SG   A  N  I
Sbjct: 115 ISSFMERMIGWE--IGCDVYSV-FGSISGMGQAMTNAAI 150


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 210 RQ*LKAVLDGHHSLAQVKCHC-PCTTSVVHLQLPVIFE 100
           R  ++AVLD + +  Q+   C P + + VH+++  IF+
Sbjct: 85  RDIVQAVLDDNET-DQLIVECSPISDANVHIKISKIFQ 121


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 19.4 bits (38), Expect = 5.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 94  SVFEDYGKLEMNH*GCTRAMTFH 162
           S+ ED  +  +   GC  A  FH
Sbjct: 40  SLLEDESERMLRKRGCIEACLFH 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,269
Number of Sequences: 438
Number of extensions: 1042
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)