Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E17
(523 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.035
SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4) 31 0.44
SB_51622| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_43823| Best HMM Match : MAM (HMM E-Value=0) 31 0.44
SB_46428| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_52706| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_45048| Best HMM Match : Pap_E4 (HMM E-Value=3.3) 30 1.3
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_40684| Best HMM Match : NIF (HMM E-Value=0) 29 1.8
SB_41085| Best HMM Match : Auxin_repressed (HMM E-Value=9) 29 2.3
SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8) 29 2.3
SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24) 29 2.3
SB_49193| Best HMM Match : Exo_endo_phos (HMM E-Value=0.025) 29 3.1
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3911| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7) 29 3.1
SB_9417| Best HMM Match : FragX_IP (HMM E-Value=0) 28 4.1
SB_47624| Best HMM Match : Caudal_act (HMM E-Value=0.66) 28 5.4
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 28 5.4
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 5.4
SB_12790| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 28 5.4
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_19262| Best HMM Match : Laminin_EGF (HMM E-Value=0.36) 28 5.4
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 27 7.1
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024) 27 7.1
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_5196| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_52514| Best HMM Match : DUF1086 (HMM E-Value=1.3) 27 7.1
SB_42226| Best HMM Match : efhand (HMM E-Value=0.25) 27 7.1
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_36173| Best HMM Match : RVT_1 (HMM E-Value=1.2) 27 7.1
SB_25792| Best HMM Match : Extensin_2 (HMM E-Value=1) 27 7.1
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 27 7.1
SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8) 27 9.4
SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8) 27 9.4
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 27 9.4
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019) 27 9.4
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 35.1 bits (77), Expect = 0.035
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = +2
Query: 122 TRTLQKRCLSTAASAYC*SLVTVTWRSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPS 301
T T ST +++ + T T R+G S+P TST R S+T T + S +P +
Sbjct: 47 TTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTSAPSTSTPR-TGSTTTTSAPSTSTPRT 105
Query: 302 AGTITLSPPSRAKAATSQQR 361
T T S PS + + S R
Sbjct: 106 GSTTTTSAPSTSTTSNSTTR 125
Score = 27.1 bits (57), Expect = 9.4
Identities = 30/103 (29%), Positives = 44/103 (42%)
Frame = +2
Query: 185 TVTWRSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRG 364
T T R+G S+P TST RT S + S PS T T + +RA + ++ + G
Sbjct: 23 TSTPRAGSTTNTSAPSTST-------PRTGSTTTTSAPSTST-TSNSTTRAPSTSTPRAG 74
Query: 365 HGKW*KTLTLSQYTETGRLQAGRRSASTYRVCPLLWSTLRTRA 493
T T + T T R + +++ P ST T A
Sbjct: 75 S----TTTTSAPSTSTPRTGSTTTTSAPSTSTPRTGSTTTTSA 113
>SB_58388| Best HMM Match : Lipocalin (HMM E-Value=7.4)
Length = 246
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 209 ALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGH 367
A PSS P+S+ PSS+ S P PPS + +L PP + + H
Sbjct: 145 AYAPSSTPSSSLLPPPSSSPPLSSPPPPPPSTPSSSLLPPPSSSPLQDSLKRH 197
>SB_51622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = -3
Query: 269 SLLTMGVPAM*TLA---DSKVGAHLHCAR*PSLEINSMRLLRLINTFSAVFSSILTYASS 99
S++T+ P+M T A ++ G S +NS + R N S + S T S
Sbjct: 122 SIVTLATPSMITTASTSNASSGEFTTAQSAQSFGLNSTTMHRASNASSTIVSETSTTTLS 181
Query: 98 PSGAISCSVN 69
PSG S ++N
Sbjct: 182 PSGITSAAIN 191
>SB_43823| Best HMM Match : MAM (HMM E-Value=0)
Length = 1724
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 402 YCDSVRVFYHFPWPRCCEVAAFALEGGDSVMVPALGGDNGDQ 277
YC S+ FYH C + + GGD V V GD+GD+
Sbjct: 842 YC-SITFFYHMFGGDCGSLLVYVYSGGDIVQVFNETGDHGDR 882
>SB_46428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 197 RSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATS 352
R D ++PP+ + R P+ST T SW L PS + + PS A +TS
Sbjct: 140 RERDRDPENAPPSKSPRHSPASTPTSSWHDLPGPS---LPDNSPSVASTSTS 188
>SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRA-KAATSQQRGHGK 373
P SP TST E + E +PL PPS SP ++ K TS + H K
Sbjct: 157 PQSPLTSTICEETTEYHPEQHTPLPPPSKSPKKSSPKRKSGKRKTSLKFSHKK 209
>SB_52706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 30.7 bits (66), Expect = 0.76
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 221 SSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATS 352
++PP+ + R P+ST T SW L PS + + PS A +TS
Sbjct: 35 NAPPSKSPRHSPASTPTSSWHDLPGPS---LPDNSPSVASTSTS 75
>SB_45048| Best HMM Match : Pap_E4 (HMM E-Value=3.3)
Length = 146
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +2
Query: 134 QKRCLSTAASAYC*SLVTVTWRS---GDALRPSSPPTSTWRELPSSTRTESWSPLSPPSA 304
Q+ C S + A C ++ + + D R PT +++L S+ PL+PP
Sbjct: 5 QRNCHSFCSMAECLQMLLLAVKELCPADLRRKLPLPTDFFKKLTSAPEP----PLAPPPR 60
Query: 305 GTITLSPPSRAKAATSQQRGHGKW*KTLTLSQYTETG 415
+PP+R K + Q + + W T + ETG
Sbjct: 61 --CKSAPPTRRKQDSEQSQKNVTWMTTTNQIKAPETG 95
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 221 SSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPP 328
S PT T+ + P+ TR S +P + PS+ T T PP
Sbjct: 536 SETPTKTFNKTPA-TRPSSETPTTRPSSETPTTKPP 570
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 215 RP-SSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGHGKW*KTLT 391
RP S PTST E P T+T + +P + PS+ T T P S + G+ +++
Sbjct: 525 RPFSETPTSTSSETP--TKTFNKTPATRPSSETPTTRPSSETPTTKPPEISFGRRRRSVA 582
Query: 392 LSQY 403
Y
Sbjct: 583 TPTY 586
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 197 RSGDALRPSSPPTSTWRE-LPSSTRTESWSPL-SPPSAGTITLSPPSRAKAAT 349
R D+ PS PP + PS R SP SPP + L PP R +A+T
Sbjct: 908 RRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRAST 960
>SB_40684| Best HMM Match : NIF (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 186 VTRDQQYALAAVDKHLFCSVLVNSHVCELTERRHQLFREHIAIVMGYFREICHLLG 19
V++ + L K ++ L+N E RH+LFREH V G + + +LG
Sbjct: 268 VSKVFEVILFTASKRVYADKLLNILDPEKKYFRHRLFREHCVCVQGNYIKDLSILG 323
>SB_41085| Best HMM Match : Auxin_repressed (HMM E-Value=9)
Length = 206
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 281 SPLSPPSAGTITLSPPSRAKAAT 349
SP +PPSAGT+ SP + A T
Sbjct: 83 SPFTPPSAGTVGASPSNPANPGT 105
>SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8)
Length = 398
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 206 DALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTI-TLSPP---SRAKAATSQQRGHGK 373
D ++ +SP +P+ T T+ WS +P S G + PP RA + + +R H K
Sbjct: 272 DHVKDTSPKQQEKVRIPAPTMTQGWSSPTPQSLGPARSPRPPPQSPRAPMSNNDERVHPK 331
>SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)
Length = 346
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 245 RELPSSTRTESWSPLS--PPSAGTITLSPPSRAKAATSQQRG 364
R+ P++T + SP + PP+A +PP+ A AAT+ G
Sbjct: 288 RKTPAATTPPTGSPAATTPPTAAPAATTPPTVAPAATTPPTG 329
>SB_49193| Best HMM Match : Exo_endo_phos (HMM E-Value=0.025)
Length = 236
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 120 NSHVCELTERRHQLFREHI 64
NSH+C L ER HQL HI
Sbjct: 23 NSHLCALKEREHQLKIMHI 41
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATS 352
PSS P+S++ +P S+ S SP S S SPPS +++S
Sbjct: 142 PSSSPSSSFPSVPPSSPPSSSSP-SSSSPSVPPSSPPSSPPSSSS 185
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTITL 319
PSSPP+S+ S + S P SPPS+ + +L
Sbjct: 155 PSSPPSSSSPSSSSPSVPPSSPPSSPPSSSSSSL 188
>SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 120 NSHVCELTERRHQLFREHI 64
NSH+C L ER HQL HI
Sbjct: 140 NSHLCALKEREHQLKIMHI 158
>SB_3911| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7)
Length = 393
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 227 PPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQR 361
PP + E PS + T +W+ + S T + S P R+ + R
Sbjct: 300 PPVKIFTETPSKSVTAAWTTPNRSSTNTTSASSPHRSATEIGKLR 344
>SB_9417| Best HMM Match : FragX_IP (HMM E-Value=0)
Length = 875
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -2
Query: 186 VTRDQQYALAAVDKHLFCSVLVNSHVCELTERRHQLFREHIAIV 55
+TR YA++ + C ++ ++ + + HQL +H+A+V
Sbjct: 654 MTRSLDYAISRFESGDLCGIVDLENLLAVNKLTHQLLSKHLALV 697
>SB_47624| Best HMM Match : Caudal_act (HMM E-Value=0.66)
Length = 424
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATS 352
P PPTST + PS+ + S + PP+ T+ S S A ++ S
Sbjct: 330 PLGPPTSTSQTQPST--SNSTATTWPPATSTLLQSASSTATSSNS 372
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 79 VP*THRNSDGLFSRNLPPSRVCS 11
VP T+ N D L SRN PPS S
Sbjct: 102 VPSTNNNQDALSSRNRPPSESSS 124
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 146 LSTAASAYC*SLVTVTWRSGDALRPSSPPTS---TWRELPSSTRTESWSPLSPPSAGTIT 316
LST++ + SL + +S SSPP+S T+ PSST + SP S P +
Sbjct: 945 LSTSSLSITSSLPQQSMQSPSPPEYSSPPSSSQSTFLSSPSSTSLQQPSPSSQPHSEPRL 1004
Query: 317 LSPPSRAKAATSQQ 358
SP + + Q
Sbjct: 1005 PSPSLESSTLQTSQ 1018
>SB_12790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 245 RELPSSTRTESWSPLS--PPSAGTITLSPPSRAKAATSQQRG 364
R+ P++T + +P + PP+A +PP+ A AAT+ G
Sbjct: 66 RKTPAATTPPTVAPAATTPPTAAPAATTPPTGAPAATTPPTG 107
>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
Length = 419
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 200 SGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQ 358
+G + + SSPP PS +++ SP +PP+ + SPP+ ++ +++Q
Sbjct: 288 TGQSDKQSSPP-------PSRGQSDKQSPSTPPTVQSDKQSPPTPSRGQSNKQ 333
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGT-ITLSPPSRAKAATSQQ 358
PSS TS +E P ST+ S + SP S T +T PPS + +Q+
Sbjct: 900 PSSQVTSVTQESP-STQVTSATQESPSSQVTSVTQEPPSTQVTSVTQE 946
>SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 185 TVTWRSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTI 313
++T + +RPSSP + + P++T S +PL PPSA I
Sbjct: 166 SITKAGKNMMRPSSPNS----QAPTTTSPTSPTPLLPPSAPPI 204
>SB_19262| Best HMM Match : Laminin_EGF (HMM E-Value=0.36)
Length = 1173
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 486 VLRVDQSRGQTLYVLADLLPACKRPVSVYCDSVRVFYH 373
V +V+ + +TL + L PAC+ + CD+V F H
Sbjct: 862 VRKVESPKNKTLDIAIGLPPACQVSQNSVCDTVVSFCH 899
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 221 SSPPTSTWRELPSSTRTESWSPLS--PPSAGTITLSPPSRAKAATSQQRG 364
++PPT P++T + +P + PP+A +PP+ A AAT+ G
Sbjct: 119 TTPPTGA----PAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTG 164
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 221 SSPPTSTWRELPSSTRTESWSPLS--PPSAGTITLSPPSRAKAATSQQRG 364
++PPT P++T + +P + PP+A +PP+ A AAT+ G
Sbjct: 186 TTPPTGA----PAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTG 231
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 221 SSPPTSTWRELPSSTRTESWSPLS--PPSAGTITLSPPSRAKAATSQQRG 364
++PPT P++T + +P + PP+A +PP+ A AAT+ G
Sbjct: 9 TTPPTGA----PAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTG 54
>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
Length = 1213
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTI 313
PSS PT+T PS T S P P+ G +
Sbjct: 842 PSSAPTTTTNPTPSVTNGNSPIPSGTPTQGVV 873
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 191 TWRSGDALRPSSPPTSTWRELPSST-RTESWSPLSPPS 301
T R +AL+P PP++T ++L + ++ + PL+PPS
Sbjct: 47 TSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPS 84
>SB_5196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 215 RPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATS 352
RP++ P +R LP P PP + +PPS +K A S
Sbjct: 322 RPATAPPPVFRGLPQLPPVFRCLPQLPPVFPGLLTAPPSISKPANS 367
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +1
Query: 271 GELVTIVTAKRGNHYAVSTFEGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREYI 450
G ++++TA +H+ + A T P +V + + +G ++E++ +
Sbjct: 42 GSTISVLTAP-SSHHDTDFVKATPSGPAPTNPVLIVRDGSINVSHGGSIEKAKEDVDKLN 100
Query: 451 QSLPPALVDSENPSTPVLH 507
+L PA+VDS V H
Sbjct: 101 VNLKPAVVDSVEKDVKVDH 119
>SB_52514| Best HMM Match : DUF1086 (HMM E-Value=1.3)
Length = 334
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 287 LSPPSAGTITLSPPSRAKAATSQQRGHGKW*KTL 388
LSP SA TI S K+ +S RG G W K +
Sbjct: 190 LSPLSATTIAAIVTSLGKSLSSVARGVGNWLKAI 223
>SB_42226| Best HMM Match : efhand (HMM E-Value=0.25)
Length = 550
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 215 RPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGHG 370
R +PP + L S R+ES + S P + + PP R + +S + G
Sbjct: 77 REGTPPKKILKPLGSPARSESTASYSTPVPNSPKVLPPIRREENSSHRPDFG 128
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 221 SSPPTSTWRELPSSTRTESWSPLS--PPSAGTITLSPPSRAKAATSQQRG 364
++PPT P++T + +P + PP+A +PP+ A AAT+ G
Sbjct: 72 TTPPTGA----PAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTG 117
>SB_36173| Best HMM Match : RVT_1 (HMM E-Value=1.2)
Length = 623
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 163 RILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDGELVTIVTAKRGNHYAVSTFEGEG 342
RI + + G A + MAGT +NK G+++ I+ + G +V+ G G
Sbjct: 54 RIEAVGASGGYDTTDNAKAYRGRGAKMAGTFTLNK-GDIIKILVGQEGGINSVAKSAGGG 112
Query: 343 G 345
G
Sbjct: 113 G 113
>SB_25792| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 440
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 260 STRTESWSPLSPPSAGTITLSPPSRAKA 343
S+R+ S SP P AGT PPSR +
Sbjct: 293 SSRSHSASPCYPIMAGTTDSKPPSRCSS 320
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 215 RPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAA-TSQQR 361
RP S T W P +S +P S +PPSR K A TS QR
Sbjct: 601 RPKSARTRAWSVSPRLYTPKSITPKFILSPRQTLSAPPSRPKTAPTSAQR 650
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 185 TVTWRSGDALRPSSPPTSTWRELPSSTRTESWSPLS-----PPSAGTITLSPP 328
T+++ +GDALR S T LP + R + +S P S IT PP
Sbjct: 154 TISFPTGDALRQSIGTTFPPTRLPGNARVNAIDQISIGTSHPTSPSQITQPPP 206
>SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 560
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 123 REHCRKGVYQPQQAHTVDL**RSPGAVEMRSDLRV 227
R+H K ++ +Q H V L S AV+ +SDL V
Sbjct: 104 RQHTEKPIFMQEQVHGVTL---SSDAVDSKSDLAV 135
>SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 688
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 123 REHCRKGVYQPQQAHTVDL**RSPGAVEMRSDLRV 227
R+H K ++ +Q H V L S AV+ +SDL V
Sbjct: 148 RQHTEKPIFMQEQVHGVTL---SSDAVDSKSDLAV 179
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESW-SPLSPPSAGTITLSPPSRAKAAT 349
PS+P T + R PS+ T S S LS PS ++ +P + + +T
Sbjct: 189 PSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPST 233
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESW-SPLSPPSAGTITLSPPSRAKAAT 349
PS+P T + R PS+ T S S LS PS ++ +P + + +T
Sbjct: 739 PSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPST 783
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 215 RPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGH 367
+ S+ S +R + + + + SPL+ P+AG T + P + S ++ H
Sbjct: 153 KDSTNVESVFRTMAAELKAKLGSPLTSPTAGNSTDACPLKLSDGVSVEQSH 203
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 206 DALRPSSPPTSTWRELPSSTR--TESWSPLSPPSAGTITLSPPSRAKAATSQQRG 364
D RP++PP +T + SST T + + S P+ T T PP T G
Sbjct: 619 DCSRPTTPPVTTTKSTTSSTTKGTTASTTTSTPTT-TPTTRPPCNLHCQTLNPDG 672
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 450 YVLADLLPACKRPVSVYCDSVRVFYHFPWPRCCEVAAFA 334
+V D K S S + YH WP CC++ + A
Sbjct: 250 FVRRDRTRKRKNSTSSTGGSKKTLYHCTWPGCCKILSTA 288
>SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019)
Length = 448
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 414 PVSVYCDSVRVFYHFPWPRCCEV 346
P + CDSV V +H P P+C V
Sbjct: 372 PSNPKCDSVEVHFHPPNPKCDSV 394
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,444,306
Number of Sequences: 59808
Number of extensions: 410436
Number of successful extensions: 1514
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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