Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E17
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 0.50
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 0.50
U88178-1|AAC24412.1| 296|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC006795-3|AAF59494.1| 369|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 29 2.7
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 2.7
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 2.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 3.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 3.5
U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 3.5
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 28 4.7
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 28 4.7
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 28 4.7
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 28 4.7
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 28 4.7
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 28 4.7
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 4.7
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 27 6.2
U67950-2|AAP13772.1| 147|Caenorhabditis elegans Hypothetical pr... 27 8.1
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 8.1
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 8.1
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 27 8.1
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 27 8.1
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 27 8.1
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 27 8.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 27 8.1
AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006629-2|AAK18928.1| 306|Caenorhabditis elegans Hypothetical ... 27 8.1
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 194 WRSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPS 331
W DA +P P T R+LPS++ S S S+ T+T S P+
Sbjct: 366 WSVSDATKPMDSP-KTHRKLPSASSLFSQEDSSSSSSSTLTPSKPT 410
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 194 WRSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPS 331
W DA +P P T R+LPS++ S S S+ T+T S P+
Sbjct: 352 WSVSDATKPMDSP-KTHRKLPSASSLFSQEDSSSSSSSTLTPSKPT 396
>U88178-1|AAC24412.1| 296|Caenorhabditis elegans Hypothetical
protein W09C3.4 protein.
Length = 296
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 340 GGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREYI 450
G Y A+ R + ENPN + + + S+ +EI ++I
Sbjct: 177 GSYAASRRKHAIDENPNNIQMQREASYIRPQEIAQFI 213
>AC006795-3|AAF59494.1| 369|Caenorhabditis elegans Hypothetical
protein Y50D4B.5 protein.
Length = 369
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 503 STGVLGFSESTKA--GGKLCMYSRISSRLVNDLSPYTATVLGFSTTFHGRV 357
+TG GFS T+ G L + + L ++PY+ T LGF+ HG V
Sbjct: 299 TTGTDGFSTGTRELDGTYLQKFRGVQQCLHMIVTPYSDTELGFADFVHGSV 349
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 212 LRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITL 319
+RP+S T+T P+ T T + + ++PP+ T T+
Sbjct: 23 IRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTI 58
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 182 VTVTWRSGDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQR 361
VT T + P + T E P+ST + + L + T+T P+ A+ +T+ Q+
Sbjct: 556 VTTTEEPANTGNPPTTENPTTTEQPTSTAESTTTALPFTTEQTVTTEEPTTAEKSTATQK 615
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 224 SPPTSTWRELPSSTRT-ESWSPLSPPSAGTITLSPPSRAKAAT 349
+PPT+ + RT ++W+P +PP+ T P ++A T
Sbjct: 380 TPPTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPPIT 422
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Frame = +1
Query: 97 GELAYVRIDE-NTAEKVFINRSKRILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDG 273
G + R++E + EK ++ S+ + ++ H RC P F + P +
Sbjct: 320 GRICRARVNECSNKEKYNVDCSENAICADTE-HSYSCRCRPGFADVSAAFNKLP-GRRCI 377
Query: 274 ELVTIVTAKRGNHYAVSTF--EGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREY 447
E V + N + + F + + GY T RP V +PN G E+I+
Sbjct: 378 EAVNECASPSLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGRICTKPVEKIKTD 437
Query: 448 IQSLPPALVDSENPSTP 498
++ + D +P P
Sbjct: 438 LKDTSFSTDDGCDPKNP 454
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Frame = +1
Query: 97 GELAYVRIDE-NTAEKVFINRSKRILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDG 273
G + R++E + EK ++ S+ + ++ H RC P F + P +
Sbjct: 904 GRICRARVNECSNKEKYNVDCSENAICADTE-HSYSCRCRPGFADVSAAFNKLP-GRRCI 961
Query: 274 ELVTIVTAKRGNHYAVSTF--EGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREY 447
E V + N + + F + + GY T RP V +PN G E+I+
Sbjct: 962 EAVNECASPSLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGRICTKPVEKIKTD 1021
Query: 448 IQSLPPALVDSENPSTP 498
++ + D +P P
Sbjct: 1022 LKDTSFSTDDGCDPKNP 1038
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Frame = +1
Query: 97 GELAYVRIDE-NTAEKVFINRSKRILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDG 273
G + R++E + EK ++ S+ + ++ H RC P F + P +
Sbjct: 320 GRICRARVNECSNKEKYNVDCSENAICADTE-HSYSCRCRPGFADVSAAFNKLP-GRRCI 377
Query: 274 ELVTIVTAKRGNHYAVSTF--EGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREY 447
E V + N + + F + + GY T RP V +PN G E+I+
Sbjct: 378 EAVNECASPSLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGRICTKPVEKIKTD 437
Query: 448 IQSLPPALVDSENPSTP 498
++ + D +P P
Sbjct: 438 LKDTSFSTDDGCDPKNP 454
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Frame = +1
Query: 97 GELAYVRIDE-NTAEKVFINRSKRILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDG 273
G + R++E + EK ++ S+ + ++ H RC P F + P +
Sbjct: 904 GRICRARVNECSNKEKYNVDCSENAICADTE-HSYSCRCRPGFADVSAAFNKLP-GRRCI 961
Query: 274 ELVTIVTAKRGNHYAVSTF--EGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREY 447
E V + N + + F + + GY T RP V +PN G E+I+
Sbjct: 962 EAVNECASPSLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGRICTKPVEKIKTD 1021
Query: 448 IQSLPPALVDSENPSTP 498
++ + D +P P
Sbjct: 1022 LKDTSFSTDDGCDPKNP 1038
>U67954-1|AAB52605.2| 826|Caenorhabditis elegans Hypothetical
protein F41D9.1 protein.
Length = 826
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 265 KDGELVTIVTAKRGNHYAVSTFEGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIRE 444
+ ++VTI++ K H V G G+F V E + +YGD + + EI E
Sbjct: 546 RKNDIVTIISEK-DEHCWVGEVNGLRGWFPAKFVEVVDERGKSYTIYGDEAVS--PEITE 602
Query: 445 YIQ 453
YI+
Sbjct: 603 YIR 605
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Frame = +1
Query: 97 GELAYVRIDE-NTAEKVFINRSKRILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDG 273
G + R++E + EK ++ S+ + ++ H RC P F + P +
Sbjct: 904 GRICRARVNECSNKEKYNVDCSENAICADTE-HSYSCRCRPGFADVSAAFNKLP-GRRCI 961
Query: 274 ELVTIVTAKRGNHYAVSTF--EGEGGYFATTRPWKVVENPNTVAVYGDRSFTSREEIREY 447
E V + N + + F + + GY T RP V +PN G E+I+
Sbjct: 962 EAVNECASPSLNDCSKNAFCEDAKEGYICTCRPGYVDNSPNAARHPGRICTKPVEKIKTD 1021
Query: 448 IQSLPPALVDSENPSTP 498
++ + D +P P
Sbjct: 1022 LKDTSFSTDDGCDPKNP 1038
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 200 SGDALRPSSPPTSTWRELPSSTRTES 277
S D RP SPP+S + + S TR +S
Sbjct: 1462 SSDDPRPGSPPSSDYSDTESRTRADS 1487
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 200 SGDALRPSSPPTSTWRELPSSTRTES 277
S D RP SPP+S + + S TR +S
Sbjct: 1462 SSDDPRPGSPPSSDYSDTESRTRADS 1487
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 27.9 bits (59), Expect = 4.7
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -2
Query: 324 GDSVMVPALG-GDNGDQLSVLVDDGSSRHVDVGGLEGRSASPL-RQVTVTRDQQYALAAV 151
G SV++ LG GD +L ++G HVD G + GR P+ + +T + + V
Sbjct: 742 GYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDPKPMPPPMKLTSEMVQVMGGV 801
Query: 150 DKHLFCSVLVNSHVCELTERRHQLFREHIAIVMGYF 43
F + HV + +++ R H +++ F
Sbjct: 802 KSKQFLEFV--QHV----DSAYRILRRHSNVLLNLF 831
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 27.9 bits (59), Expect = 4.7
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -2
Query: 324 GDSVMVPALG-GDNGDQLSVLVDDGSSRHVDVGGLEGRSASPL-RQVTVTRDQQYALAAV 151
G SV++ LG GD +L ++G HVD G + GR P+ + +T + + V
Sbjct: 495 GYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDPKPMPPPMKLTSEMVQVMGGV 554
Query: 150 DKHLFCSVLVNSHVCELTERRHQLFREHIAIVMGYF 43
F + HV + +++ R H +++ F
Sbjct: 555 KSKQFLEFV--QHV----DSAYRILRRHSNVLLNLF 584
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 27.9 bits (59), Expect = 4.7
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -2
Query: 324 GDSVMVPALG-GDNGDQLSVLVDDGSSRHVDVGGLEGRSASPL-RQVTVTRDQQYALAAV 151
G SV++ LG GD +L ++G HVD G + GR P+ + +T + + V
Sbjct: 742 GYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDPKPMPPPMKLTSEMVQVMGGV 801
Query: 150 DKHLFCSVLVNSHVCELTERRHQLFREHIAIVMGYF 43
F + HV + +++ R H +++ F
Sbjct: 802 KSKQFLEFV--QHV----DSAYRILRRHSNVLLNLF 831
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 27.9 bits (59), Expect = 4.7
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = -2
Query: 324 GDSVMVPALG-GDNGDQLSVLVDDGSSRHVDVGGLEGRSASPL-RQVTVTRDQQYALAAV 151
G SV++ LG GD +L ++G HVD G + GR P+ + +T + + V
Sbjct: 746 GYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDPKPMPPPMKLTSEMVQVMGGV 805
Query: 150 DKHLFCSVLVNSHVCELTERRHQLFREHIAIVMGYF 43
F + HV + +++ R H +++ F
Sbjct: 806 KSKQFLEFV--QHV----DSAYRILRRHSNVLLNLF 835
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 189 SPGAVE--MRSDLRVRQRLHGGNSHRQQGRRAGHHCHRQAREP 311
SPG +R+ QRLH S Q R H HRQ+ P
Sbjct: 985 SPGHTRKLIRNVSESAQRLHPSGSTPQTSRAPSRHSHRQSPNP 1027
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 215 RPSSPPTSTWRELPSSTRTESWS 283
R SPP WR+ + R E WS
Sbjct: 181 RSGSPPVRNWRDEEENRRAEMWS 203
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 209 ALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQ 358
++RPS P + + P+++ T + PLSP + TI P TS +
Sbjct: 271 SVRPSPPASPSSTSQPTTSATTTSEPLSPST--TIVTDAPELVTTETSTE 318
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 230 PTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATS 352
PTST E+P++T TE + + T T +P + +T+
Sbjct: 314 PTSTTTEIPTTTTTEEATTTTEEITTTTTKAPTTTTTQSTT 354
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 218 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGH 367
P++P TS W P++ T +P + P+ G +PP+ A + +
Sbjct: 349 PAAPSTS-WGAAPAAPPTWGGAPTAAPTWGAANDAPPAATPAPVAASNAY 397
>U67950-2|AAP13772.1| 147|Caenorhabditis elegans Hypothetical
protein T01B6.3b protein.
Length = 147
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 241 MAGTPIVNKDGELVTIVTAKRGNHYAVSTFEGEGGYFATTRPWKVVENPNTVAVYGDRSF 420
M+ P+VN ++V ++ A++ + + +G + P K++++ + VYG S+
Sbjct: 24 MSTIPVVNDFKQIVNML-ARKDIILEIMSHQGGNFHDMLKEPVKILQSLQSRLVYGRSSY 82
Query: 421 TSREEIREYIQS 456
T E + + + S
Sbjct: 83 TVFETVAKMMTS 94
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 241 MAGTPIVNKDGELVTIVTAKRGNHYAVSTFEGEGGYFATTRPWKVVENPNTVAVYGDRSF 420
M+ P+VN ++V ++ A++ + + +G + P K++++ + VYG S+
Sbjct: 342 MSTIPVVNDFKQIVNML-ARKDIILEIMSHQGGNFHDMLKEPVKILQSLQSRLVYGRSSY 400
Query: 421 TSREEIREYIQS 456
T E + + + S
Sbjct: 401 TVFETVAKMMTS 412
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 254 PSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGHGKW 376
PSS + SP+SPP+A + + + S + ++ GKW
Sbjct: 30 PSSHALRTLSPVSPPTANSSSSTSRSCSPVVRAETIVAGKW 70
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 254 PSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGHGKW 376
PSS + SP+SPP+A + + + S + ++ GKW
Sbjct: 30 PSSHALRTLSPVSPPTANSSSSTSRSCSPVVRAETIVAGKW 70
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 254 PSSTRTESWSPLSPPSAGTITLSPPSRAKAATSQQRGHGKW 376
PSS + SP+SPP+A + + + S + ++ GKW
Sbjct: 30 PSSHALRTLSPVSPPTANSSSSTSRSCSPVVRAETIVAGKW 70
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 166 ILLISSDGHLAQWRCAPTFESANVY 240
IL+ +D H AQW PT+E+ VY
Sbjct: 3506 ILMKYTDLHRAQWLKTPTWETDGVY 3530
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 222 RVRQRLHGGNSHRQQGRRAGHHCHRQARE 308
R R R H GN H+ Q R H+ R R+
Sbjct: 86 RNRHRNHDGNRHQNQDRSRHHNQDRNRRQ 114
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 222 RVRQRLHGGNSHRQQGRRAGHHCHRQARE 308
R R R H GN H+ Q R H+ R R+
Sbjct: 930 RNRHRNHDGNRHQNQDRSRHHNQDRNRRQ 958
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 203 GDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPS 331
G+ + + PP + L SS+ T S P+ T +SPPS
Sbjct: 317 GEIIPSTPPPVAPRAVLGSSSSTSRLPNRSSPATTTAMMSPPS 359
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 203 GDALRPSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPS 331
G+ + + PP + L SS+ T S P+ T +SPPS
Sbjct: 497 GEIIPSTPPPVAPRAVLGSSSSTSRLPNRSSPATTTAMMSPPS 539
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 166 ILLISSDGHLAQWRCAPTFESANVY 240
IL+ +D H AQW PT+E+ VY
Sbjct: 3518 ILMKYTDLHRAQWLKTPTWETDGVY 3542
>AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical
protein Y45F3A.4 protein.
Length = 147
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 166 ILLISSDGHLAQWRCAPTFESANVYMAGTPIVNKDGELVTIVTAKRGNHYAVST 327
+LL+++ H+A RC T ES V ++G + + G HY T
Sbjct: 13 VLLLTTVSHVAAVRCKCTKESETVTCTDGVCETENGSCLMLDHPSMGIHYTCHT 66
>AC006629-2|AAK18928.1| 306|Caenorhabditis elegans Hypothetical
protein F12E12.4 protein.
Length = 306
Score = 27.1 bits (57), Expect = 8.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -2
Query: 417 RPVSVYCDSVRVFYHFPW 364
+P + YC V+ +Y+ PW
Sbjct: 21 KPDTTYCSEVKEYYYIPW 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,048,860
Number of Sequences: 27780
Number of extensions: 279672
Number of successful extensions: 1228
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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