Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E13
         (618 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g47160.1 68415.m05889 anion exchange family protein contains ...    29   3.3  
At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase fa...    29   3.3  
At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase fa...    28   4.3  
At3g62270.1 68416.m06996 anion exchange family protein contains ...    27   7.5  
At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR...    27   10.0 

>At2g47160.1 68415.m05889 anion exchange family protein contains
           some similarity to SWISS-PROT:P04919 anion transport
           protein (anion exchange protein 1) [Mouse] {Mus
           musculus}
          Length = 704

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = -2

Query: 182 RSRQGRP-SYSSNFHRSLV--F*APALIRIW*NVSHRNAKRVPKG 57
           RSR+ R   Y + + RSL+  +  P ++ +W  VS+  A  VPKG
Sbjct: 217 RSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYIPAGDVPKG 261


>At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase
           family protein simlar to inositol polyphosphate
           5-phosphatase I (GI:10444261) and II (GI:10444263)
           [Arabidopsis thaliana]; contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 585

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +2

Query: 152 MSNWVCLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCH 307
           M NW  L+EN+  R   K G V K  +     F    KY  ++    G D H
Sbjct: 451 MQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSRNSDRYSGDDLH 502


>At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase
           family protein similar to inositol polyphosphate
           5-phosphatase I (GI:10444261) and II (GI:10444263)
           [Arabidopsis thaliana]; contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 594

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +2

Query: 152 MSNWVCLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCH 307
           M NW  L+EN+  R   K G V K  +     F    KY  ++    G D H
Sbjct: 460 MQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSNNSDRYAGGDLH 511


>At3g62270.1 68416.m06996 anion exchange family protein contains
           similarity to anion exchanger 3, cardiac splice form -
           Rattus norvegicus, PIR:A42497
          Length = 703

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -2

Query: 182 RSRQGRP-SYSSNFHRSLV--F*APALIRIW*NVSHRNAKRVPKG 57
           RSR+ R   Y + + RSLV  +  P ++ +W  VS+     VPKG
Sbjct: 217 RSRKARSWRYGTGWLRSLVADYGVPLMVLVWTGVSYIPTGDVPKG 261


>At3g51570.1 68416.m05648 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1226

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 516 NKNVYKDIMHYTYV*KNENHQETVGKF 596
           +K++ +D+  YTYV    NH++ +G F
Sbjct: 349 DKSLIQDVADYTYVVPQLNHKDGLGHF 375


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,894,969
Number of Sequences: 28952
Number of extensions: 249372
Number of successful extensions: 607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)