Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E12
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 390 AAGKVNLFHNDYHDITAKAFATRNMPDI 473
           AA K+N FH    D  +  F   ++PD+
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDL 262


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 390 AAGKVNLFHNDYHDITAKAFATRNMPDIA 476
           AA K+N+FH    D  +    ++ +P +A
Sbjct: 265 AANKLNVFHWHLTDSQSFPLVSQRVPQLA 293


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 167 ARSSHAQLRWYLWCWS*STLCW 232
           AR  HA+     WC+     CW
Sbjct: 572 ARGIHAEALVPRWCYQNEGECW 593


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 19   TCSGRSSFYCLSLCASAFKADT*LSANLFTIFNTMRSLNY 138
            TC G S+   + +  +A  A +  S +  T +N   + NY
Sbjct: 1327 TCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTTNY 1366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 518  IVYSATDSVEVGYXSDIWHISGGESLRCDVVVIVVE 411
            IV SA   +EV   S   H+S      C ++  V+E
Sbjct: 1492 IVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIE 1527



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 223  GTLTPAPEVPSELSVRAPCASL 158
            GT+ PA E+P E + +   A+L
Sbjct: 1587 GTIAPAREIPKEDTFQIILANL 1608


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 389 SCRQSESLPQRLPRHHSEG 445
           SC  S  L Q +P HH  G
Sbjct: 49  SCDPSVGLRQGIPPHHYGG 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,346
Number of Sequences: 336
Number of extensions: 2944
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)