SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E11
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094949-1|AAM11302.1|  264|Drosophila melanogaster RH67967p pro...    28   6.3  
AE014134-2270|AAF53235.1|  264|Drosophila melanogaster CG12404-P...    28   6.3  
X59275-1|CAA41965.1| 1603|Drosophila melanogaster posterior sex ...    28   8.3  
AF217797-1|AAF36924.2|  284|Drosophila melanogaster almondex pro...    28   8.3  
AF181623-1|AAD55409.1|  284|Drosophila melanogaster BcDNA.GH0297...    28   8.3  
AE014298-1313|AAF46474.2|  284|Drosophila melanogaster CG12127-P...    28   8.3  

>AY094949-1|AAM11302.1|  264|Drosophila melanogaster RH67967p
           protein.
          Length = 264

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +3

Query: 240 PSIIDDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQSTGP 362
           P +++++ +NPN  + ++L+  N   G    I + +   GP
Sbjct: 96  PPLLEELGINPNHIFQKTLAVLNPLRGTDQQILQDTDMAGP 136


>AE014134-2270|AAF53235.1|  264|Drosophila melanogaster CG12404-PA
           protein.
          Length = 264

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +3

Query: 240 PSIIDDIKLNPNTRYARSLSTPNKYHGGSHTISKSSQSTGP 362
           P +++++ +NPN  + ++L+  N   G    I + +   GP
Sbjct: 96  PPLLEELGINPNHIFQKTLAVLNPLRGTDQQILQDTDMAGP 136


>X59275-1|CAA41965.1| 1603|Drosophila melanogaster posterior sex
           combs protein.
          Length = 1603

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 21  KVIFTLTVVAVLFVAETTCWRRDLPV--IYPTYR-PRPTVGPVTMR 149
           K I  L    ++ +A T  W+RD P+   Y  Y  P+P V P   R
Sbjct: 437 KTIVLLDYYTLMDIAYTYTWKRDAPMRFYYRVYESPQPLVKPAPRR 482


>AF217797-1|AAF36924.2|  284|Drosophila melanogaster almondex
           protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
 Frame = -1

Query: 465 RCSCYH*TSKGF------HHDAYCYANRNYVHDVCCN 373
           R SC   T K F      HHD  C  NR++  ++ CN
Sbjct: 180 RSSCNSATDKLFRTNCTVHHDVLCLGNRSFTRNLRCN 216


>AF181623-1|AAD55409.1|  284|Drosophila melanogaster BcDNA.GH02974
           protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
 Frame = -1

Query: 465 RCSCYH*TSKGF------HHDAYCYANRNYVHDVCCN 373
           R SC   T K F      HHD  C  NR++  ++ CN
Sbjct: 180 RSSCNSATDKLFRTNCTVHHDVLCLGNRSFTRNLRCN 216


>AE014298-1313|AAF46474.2|  284|Drosophila melanogaster CG12127-PA
           protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
 Frame = -1

Query: 465 RCSCYH*TSKGF------HHDAYCYANRNYVHDVCCN 373
           R SC   T K F      HHD  C  NR++  ++ CN
Sbjct: 180 RSSCNSATDKLFRTNCTVHHDVLCLGNRSFTRNLRCN 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,907,502
Number of Sequences: 53049
Number of extensions: 498733
Number of successful extensions: 1439
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -