Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E10
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 39 0.001
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 39 0.001
AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical ... 27 6.3
AF068713-3|AAC17793.1| 286|Caenorhabditis elegans Serpentine re... 27 6.3
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 8.3
U64600-2|AAK39200.2| 519|Caenorhabditis elegans Twik family of ... 27 8.3
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 27 8.3
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF083653-1|AAC32864.1| 484|Caenorhabditis elegans putative pota... 27 8.3
AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical ... 27 8.3
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 196 PESLERYIKRCYEKCKSAFDRDQIDICLKGRITAAANKDEIWTRNWDEEPIP 351
P S +RY++R +E + DR + L+ R+ N NWD EP+P
Sbjct: 188 PPSAQRYMERAFEAANTVEDRQKTQEYLQKRLFPMLNAGNAHMVNWDNEPLP 239
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 196 PESLERYIKRCYEKCKSAFDRDQIDICLKGRITAAANKDEIWTRNWDEEPIP 351
P S +RY++R +E + DR + L+ R+ N NWD EP+P
Sbjct: 193 PPSAQRYMERAFEAANTVEDRQKTQEYLQKRLFPMLNAGNAHMVNWDNEPLP 244
>AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical
protein T25D3.3 protein.
Length = 427
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 286 RITAAANKDEIWTRNWDEEPIPSVHSERNILTVKPVH 396
RI+ A ++ W + I + SERN++ P+H
Sbjct: 32 RISDAPKDQMTESKEWTRDAIQKMWSERNLMGSTPIH 68
>AF068713-3|AAC17793.1| 286|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 66 protein.
Length = 286
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 426 IRLLI*IECVMYWLNC*NITFTMYTRYRLFIPISCPNFIFIGRSC 292
I +L I CV+ + +I Y +Y + +P++C NF + C
Sbjct: 123 IPILAVISCVITFGLSDHIVLFEYCKYTVDVPLACDNFNCVINQC 167
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical
protein C14B4.2 protein.
Length = 1776
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 223 RCYEKCKSAFDRDQIDICLKGRITAAANKDEIWTRNWDE-EPIPSVHSERNILT-VKPVH 396
+ + C+ ++ +K TA KD IW+ W E E SV+ T +H
Sbjct: 376 KIHRNCEDLAQFSAKNLKIKVGGTATVEKDSIWSSTWVELETKQSVYFHGQTKTRSMTLH 435
Query: 397 NTLNLYQKSDII 432
+ N++ S+ I
Sbjct: 436 SDANVFTTSEAI 447
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical
protein C14B4.2 protein.
Length = 1776
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 223 RCYEKCKSAFDRDQIDICLKGRITAAANKDEIWTRNWDE-EPIPSVHSERNILT-VKPVH 396
+ + C+ ++ +K TA KD IW+ W E E SV+ T +H
Sbjct: 376 KIHRNCEDLAQFSAKNLKIKVGGTATVEKDSIWSSTWVELETKQSVYFHGQTKTRSMTLH 435
Query: 397 NTLNLYQKSDII 432
+ N++ S+ I
Sbjct: 436 SDANVFTTSEAI 447
>U64600-2|AAK39200.2| 519|Caenorhabditis elegans Twik family of
potassium channelsprotein 26 protein.
Length = 519
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 365 SLCTLGIGSSSQFLVQISSLLAAAVIRPFRHISIWSRS 252
SL T+G+G + +Q S LAAA + ISI + S
Sbjct: 316 SLTTIGLGDVMPYNIQYSPFLAAAFLLGLALISIVNTS 353
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 342 LFIPISCPNFIFIGRSCNTSL*TYINLVTIKCRFAFLITSFNIP 211
+F ++C + + +G S N + +++L + C FL NIP
Sbjct: 219 IFTIVNCYSMLKVGSSQNGRMKKWVHLAFVLCSVLFLGVYGNIP 262
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -2
Query: 342 LFIPISCPNFIFIGRSCNTSL*TYINLVTIKCRFAFLITSFNIP 211
+F ++C + + +G S N + +++L + C FL NIP
Sbjct: 482 IFTIVNCYSMLKVGSSQNGRMKKWVHLAFVLCSVLFLGVYGNIP 525
>AF083653-1|AAC32864.1| 484|Caenorhabditis elegans putative
potassium channel subunitn2P26 protein.
Length = 484
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 365 SLCTLGIGSSSQFLVQISSLLAAAVIRPFRHISIWSRS 252
SL T+G+G + +Q S LAAA + ISI + S
Sbjct: 281 SLTTIGLGDVMPYNIQYSPFLAAAFLLGLALISIVNTS 318
>AC084196-2|AAK39622.1| 355|Caenorhabditis elegans Hypothetical
protein Y55D5A.3 protein.
Length = 355
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 286 RITAAANKDEIWTRNWDEEPIPSVHSERNILTVKPVHNTLNLYQKSDIISPSIKD 450
RITA E+ RN+DE+ S +L+ PV N L ++ S ++ P + D
Sbjct: 296 RITAIQKLKELGRRNFDEK------SMVEVLSTVPVRNNLTVF--STVMVPGLPD 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.130 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,271,906
Number of Sequences: 27780
Number of extensions: 192315
Number of successful extensions: 382
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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