Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E09
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.8  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 275 RLDCDWFKILNPPNFDTSLTTSVGECWMNSSLGS 174
           +L+C+W    N     ++ T  +  CW +  +GS
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW-SEDMGS 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 330  SDKRNNLSWDIHYWI 374
            +D   N ++ IHYWI
Sbjct: 2038 ADATFNTNFTIHYWI 2052


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 588 VSRHPDSSRRG*NRTGYPHPSIVV 517
           VS HPDS     + T  P P + V
Sbjct: 214 VSEHPDSPNSKKSATPSPPPQLEV 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,955
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)