Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E09
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 145 3e-35
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 144 6e-35
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 131 5e-31
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 88 6e-18
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 87 1e-17
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 29 2.8
11_06_0588 + 25272067-25274850 29 3.7
10_05_0031 + 8356046-8356361,8356439-8356648,8356735-8357043,835... 28 4.9
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170... 28 6.5
12_01_0056 + 482987-483019,483153-483362,483503-483604,484601-48... 27 8.5
05_05_0160 + 22829401-22830658,22831671-22831703,22832586-22832728 27 8.5
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 145 bits (351), Expect = 3e-35
Identities = 66/113 (58%), Positives = 82/113 (72%)
Frame = +3
Query: 225 GVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAG 404
G+EIWRI+NF+PV + + +GKF+ GDSYIILKTT+ K +L DIHYWIG +TSQDE+G
Sbjct: 51 GLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESG 110
Query: 405 AAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHV 563
AAILTV LD GG AVQ+RE G+E++ FL YF + GG SGF HV
Sbjct: 111 TAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHV 163
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = +3
Query: 228 VEIWRIQNFEPVAVQSKDFGKFYKGDSYII--LKTTSDKRNNLSWDIHYWIGSETSQDEA 401
+++WRI + + + + S D KFY GD YI + DK L I W G ++ +++
Sbjct: 405 LQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL---IGSWFGKKSIEEDR 461
Query: 402 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGA 581
A L + + AVQ R G E F F S Q GG SG+ + G
Sbjct: 462 VTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKGGLSSGYKKFIAENGI 520
Query: 582 E 584
+
Sbjct: 521 D 521
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 144 bits (348), Expect = 6e-35
Identities = 66/117 (56%), Positives = 80/117 (68%)
Frame = +3
Query: 222 AGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEA 401
+G+E+WRI+NF+PV V + GKFY GDSYIILKTT+ K + D+HYW+G +TSQDEA
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 402 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTN 572
G AAILTV LD GG AVQ+RE G E+ L YF + GG SGFNHV N
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVN 153
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = +3
Query: 228 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT-TSDKRNNLSWDIHYWIGSETSQDEAG 404
+++WR+ + S D K Y GD YI T T D + I W G ++ +++
Sbjct: 409 LQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEEDRT 466
Query: 405 AAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFT--SALQYLDGGNPSGFNHVVTNPG 578
+A L F A Q +A +E +Q+F +LQ GG SG+ + + G
Sbjct: 467 SAISLA---SKMFQAAKFQAAQARLYEGKEPIQFFVIFQSLQVFKGGLSSGYKNFIAVNG 523
Query: 579 AE 584
+
Sbjct: 524 TD 525
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 131 bits (316), Expect = 5e-31
Identities = 60/117 (51%), Positives = 77/117 (65%)
Frame = +3
Query: 222 AGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEA 401
+G+EIWRI+ + V V + G+F+ GDSY+ILKTT+ K + DIHYW+G +TSQDEA
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 402 GAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTN 572
G AAI TV LD GG AVQ+RE G+E+ FL YF + +GG SGF H N
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEIN 192
Score = 44.0 bits (99), Expect = 9e-05
Identities = 31/119 (26%), Positives = 48/119 (40%)
Frame = +3
Query: 228 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGA 407
+++WR+ E + + KFY GD YI + + I W G ++ QDE
Sbjct: 453 LQVWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGE-ECLIGTWFGKKSVQDEKTT 511
Query: 408 AAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPGAE 584
A + + + AV R G E F F + L GG +G+ V+ G E
Sbjct: 512 AISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTGYKKFVSENGIE 569
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 87.8 bits (208), Expect = 6e-18
Identities = 41/116 (35%), Positives = 61/116 (52%)
Frame = +3
Query: 189 VHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHY 368
V AF G + G++IW I +A++ GKFY G++YIIL T K ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 369 WIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDG 536
W+G E +++ A+ + LD G VQ+RE G ES+ FL YF + + G
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/114 (23%), Positives = 49/114 (42%)
Frame = +3
Query: 228 VEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGA 407
+++W + N + +++ + Y GD YII + + + W G + ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 408 AAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGFNHVVT 569
AA L G+ D G AV + G E F F S + + GG + + V+
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKSLIIF-KGGRSMAYKNFVS 513
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +3
Query: 354 WDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLD 533
+DIH+WIG ++SQDEAG AAI TV LD GG AVQHRE G+ES+ FL YF + L+
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLE 126
Query: 534 GGNPSGF 554
GG SGF
Sbjct: 127 GGFASGF 133
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 2/155 (1%)
Frame = +3
Query: 120 IRQQSVNTQITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 299
++QQ V+ I S A V P G+ +E++ + A+ ++ GKFY
Sbjct: 369 LKQQGVD--IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYS 423
Query: 300 GDSYIILKT--TSDKRNNLSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREA 473
GD YI+L T + DKR + + YWIG ++ ++ A + + G + R
Sbjct: 424 GDCYIVLYTYHSGDKRE--EFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIY 481
Query: 474 MGHESNHFLQYFTSALQYLDGGNPSGFNHVVTNPG 578
G E F+ F + L GG SG+ V G
Sbjct: 482 QGKEPPQFIALF-QPMVILKGGISSGYQKFVEEKG 515
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 216 RQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETS 389
++ V +WR+ EP+ V SK FG +IL+ + RN L +W TS
Sbjct: 569 QRVAVCVWRLATGEPLRVVSKRFGLGISTCHKLILEVCAAIRNLLMPRFLHWPDHPTS 626
>11_06_0588 + 25272067-25274850
Length = 927
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +3
Query: 312 IILKTTSDKRNNLSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESN 491
I L D R+ L WD H + AG+A I+T DDK ++ S
Sbjct: 294 IFLVILHDVRDKLIWD-HIKLAFP-DDCPAGSAIIVTTDNDDKVAQTFSPYKTFNPDSSG 351
Query: 492 HFLQYFTS 515
H L +F S
Sbjct: 352 HVLNFFLS 359
>10_05_0031 +
8356046-8356361,8356439-8356648,8356735-8357043,
8357225-8357347,8357428-8357502,8357597-8357687,
8357775-8357866,8357890-8358020
Length = 448
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 432 RGRQSRWQPLPLHPD*SRFRSSNVYPMIDCSFYPMSSLELYRNLLCRTSQSLSI 271
RG QP PLHP +R R +V ++D + S L L + Q+LSI
Sbjct: 340 RGAPVGEQPAPLHPKSTRKRKVSVKVLLDKTSKKKSDLSLQGLWIDVLDQNLSI 393
>11_01_0218 -
1704459-1704629,1704895-1705119,1705120-1705277,
1705378-1705463,1705574-1705823,1706220-1707246
Length = 638
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 357 DIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHES 488
D+H ++ S ++ + AA G FGG H +A G ++
Sbjct: 303 DLHMFVWSSSASPVSERAAAAAAGAVHVFGGGGADHGDAKGAQA 346
>12_01_0056 +
482987-483019,483153-483362,483503-483604,484601-484700,
484775-484866,484962-485738
Length = 437
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 547 DGLPPSKYCSADVKYCRKWLLSWPIASRCCTAAPPNL 437
D LPP+ S ++ CRKW L W ++ T P +
Sbjct: 364 DALPPAVQKSV-LEECRKWNLVWVGKNKVATLEPDEM 399
>05_05_0160 + 22829401-22830658,22831671-22831703,22832586-22832728
Length = 477
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 589 RFSAPGFVTTWLKPDGLPPSKYCSADVK 506
RF PGF+T + DG PP +Y A+++
Sbjct: 175 RFVKPGFLTQADRGDG-PPDRYAVAEIR 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,143,405
Number of Sequences: 37544
Number of extensions: 400685
Number of successful extensions: 1128
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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