Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E09
         (594 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)             119   2e-27
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)        118   3e-27
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)              56   2e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)                55   5e-08
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   2e-07
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)                48   8e-06
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)                   46   2e-05
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)                 39   0.003
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)               38   0.005
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)              38   0.005
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.93 
SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11)                      30   1.2  
SB_56058| Best HMM Match : Phasin (HMM E-Value=2.7)                    30   1.2  
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_50341| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_43353| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-07)                 27   8.6  
SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)                27   8.6  

>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
          Length = 1078

 Score =  119 bits (287), Expect = 2e-27
 Identities = 60/131 (45%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +3

Query: 174 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDK-RNNL 350
           R  A    A+ NAG + G++IWRI+ F+      +D+G FY GDSYIIL T  +   + L
Sbjct: 460 REAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKESGEDEL 519

Query: 351 SWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYL 530
            +D+H+WIG +++QDE G AA  TV LD       +QHRE  G ES  F  YF S L  L
Sbjct: 520 KYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS-LTIL 578

Query: 531 DGGNPSGFNHV 563
            GG  SGF HV
Sbjct: 579 KGGVDSGFRHV 589



 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 264  AVQSKDFGKFYKGDSYIILKTTSD-KRNNLSWDIHYWIGSETSQDEAGAAAILTVGLD 434
            +V   D+GKFY GDSYIIL T  D + + L +D+H+WIG +++QDE G AA  TV LD
Sbjct: 879  SVLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELD 936


>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
          Length = 1531

 Score =  118 bits (285), Expect = 3e-27
 Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
 Frame = +3

Query: 147 ITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT 326
           ++ ++ +  ++ A    A+ NAG + G++IWRI  F+      + +G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555

Query: 327 TSDKRNN--LSWDIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFL 500
             +K +   L +D+H+WIG  ++QDE G AA  TV LD       VQHRE M HES+ F 
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615

Query: 501 QYFTSALQYLDGGNPSGFNHV 563
            YF S + YL GG  +GFN V
Sbjct: 616 TYFKS-ITYLKGGAETGFNQV 635


>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
          Length = 546

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +3

Query: 213 GRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQ 392
           GR   V  +R+ +   V   +   G F+ GDSY+++ T   +R      I++W G+++  
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214

Query: 393 DEAGAAAILTVGLD-DKFGGAAVQ 461
            E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238


>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
          Length = 675

 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +3

Query: 174 RTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKT 326
           +  A   PA+  AG++ GV++WRI  F+      +D+G FY GDSYI+L T
Sbjct: 352 KESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402


>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 313

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
 Frame = +3

Query: 189 VHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWD--- 359
           V  AF  AG++ G+EIWRI+  + VA   K +G FY GDSYI L      ++    D   
Sbjct: 3   VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62

Query: 360 ------IHYWIGSETSQDEAGAAAILTVGL-DDKFGGAAVQH 464
                 I+ W GS+ S+ E      +   + D++ GG A  H
Sbjct: 63  LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVH 104


>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
          Length = 341

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 23/53 (43%), Positives = 32/53 (60%)
 Frame = +3

Query: 357 DIHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTS 515
           ++H+W+GSE S +E   AA   V L  K  G  VQ+REA G+E+  F + F S
Sbjct: 22  NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74


>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
          Length = 754

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +3

Query: 249 NFEPVAVQSKDFGK-FYKGDSYIILKTTSDKRNNLSWDIHYWIGSETSQDEAGAAAILTV 425
           N + V +++K   + FY GDSY+IL    DK N     +H   G   S DE   AA   +
Sbjct: 662 NMKLVKMENKVIKEGFYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAI 721

Query: 426 GLDDK-FGGAAVQHREAMGHESNHF 497
            +DD+ FGG A Q  +    E   F
Sbjct: 722 AIDDEYFGGKAKQTVQVCCREKVQF 746


>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
          Length = 446

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 318 LKTTSDKRNNLSWDIHYWIGSETSQDEAG 404
           LKT  D+ + L W I+YWIG E S++E G
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEASREEQG 288


>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
          Length = 693

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
 Frame = +3

Query: 207 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIIL--------KTTSDKRNNLSWDI 362
           N     GV +W I  +    + +++ G F+ G+ Y+I         +  +D+++     +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273

Query: 363 --------HYWIGSETSQDEAGAAAILTVGLDDKFG 446
                    +W G++ + +E GAAA++ V LD++ G
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 309


>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
          Length = 1866

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
 Frame = +3

Query: 207  NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIIL--------KTTSDKRNNLSWDI 362
            N     GV +W I  +    + +++ G F+ G+ Y+I         +  +D+++     +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828

Query: 363  --------HYWIGSETSQDEAGAAAILTVGLDDKFG 446
                     +W G++ + +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864


>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 770

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 366 YWIGSETSQDEAGAAAILTVGLDDKFG-GAAVQHREAMGHESNHFLQY-FTSALQYLDG 536
           +W G +++ +E GAAA++TV +D + G     +H   +  + + F  Y   S   Y DG
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDG 255


>SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11)
          Length = 862

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 562 TWLKPDGLPPSKYCSADVKYCRK--WLLSWPIASRCCTAAP 446
           TW KPDG+P        V +C +  W ++ PI +    + P
Sbjct: 388 TWQKPDGIPDKYIPGVSVSWCYQCDWEVTPPIVTETSVSVP 428


>SB_56058| Best HMM Match : Phasin (HMM E-Value=2.7)
          Length = 314

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +1

Query: 385 LVRMKRERLPS*LSASMTSSVERRYNTARLWATRVTTSYSTSHLHYNT 528
           L+R+ +E L   LS  + + ++  +N   LW+   ++S  ++H H  T
Sbjct: 122 LIRLGKEELRR-LSIQLVNKLDTTWNNCLLWSIPTSSSLDSAHAHLKT 168


>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 65

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +3

Query: 366 YWIGSETSQDEAGAAAILTVGLDDKFG 446
           +W G +++ +E GAAA++TV +D + G
Sbjct: 37  FWQGHDSTVNEKGAAALMTVEIDSEKG 63


>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3486

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 324  TTSDKRNNLSWDIHYWIGSETSQDEAGAAAILT 422
            ++S+  N   WD  YW   ET + +   AA +T
Sbjct: 2031 SSSESLNRSKWDARYWAKFETERKKHQRAASMT 2063


>SB_50341| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 324 TTSDKRNNLSWDIHYWIGSETSQDEAGAAAILT 422
           ++S+  N   WD  YW   ET + +   AA +T
Sbjct: 42  SSSESLNRSKWDARYWAKFETERKKHQRAASMT 74


>SB_43353| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-07)
          Length = 244

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 429 LDDKFGGAAVQHREAMGHESNHFLQYFTSALQYL 530
           +DDKF G     ++     S   L YFT  L YL
Sbjct: 74  VDDKFRGILAYCKQNQSEYSFQALDYFTGVLHYL 107


>SB_10433| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
          Length = 212

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +1

Query: 349 YHGIYITGSEARLVRMKRERLPS*LSASMTSSVERRYNTARLWATRVTTSYSTSHLH-YN 525
           Y+  +  G+     +    R+   L    T+ V+ +    R   T  TTS +T H+H YN
Sbjct: 17  YNTTHYLGTRYCPAQQNSRRIRYSLLTLPTALVQHQATPTRHVHTNNTTSQATRHVHTYN 76

Query: 526 TWMGVTRPVSTTS*RIRVPRNV 591
           T    +R V T +   +  R+V
Sbjct: 77  TTSQASRYVHTYNTTSQATRHV 98


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,778,432
Number of Sequences: 59808
Number of extensions: 445672
Number of successful extensions: 1318
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)