Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E09
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 84 6e-17
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 84 6e-17
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical ... 28 5.8
Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 116 bits (278), Expect = 2e-26
Identities = 55/123 (44%), Positives = 69/123 (56%)
Frame = +3
Query: 195 PAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWI 374
PA A G++ G+ +WRI F V D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 375 GSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGF 554
G S DE G AAI TV +DD GG QHRE +ES FL YF ++Y+ GG SG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 555 NHV 563
HV
Sbjct: 124 RHV 126
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 84.2 bits (199), Expect = 6e-17
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +3
Query: 207 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 386
+ G G+ +W I+NF P + G+FY D+Y++LKTT + L I YW+G
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 387 SQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNP-SGF 554
S D+ +A+ VGL + RE M E+ FL F + Y++GG SGF
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF 619
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 84.2 bits (199), Expect = 6e-17
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +3
Query: 207 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 386
+ G G+ +W I+NF P + G+FY D+Y++LKTT + L I YW+G
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 387 SQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNP-SGF 554
S D+ +A+ VGL + RE M E+ FL F + Y++GG SGF
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF 619
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 237 WRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIH 365
W + NFE + K YK + + I+K KRN L+ +IH
Sbjct: 332 WDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIH 374
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
F21H12.6 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 360 IHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAM 476
+H +G++ S D A +A+ T+G + KF G A+ + M
Sbjct: 966 VHVKLGNKISVDLAASASDATLGKECKFAGKALLPNQEM 1004
>AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical
protein C17F4.5 protein.
Length = 348
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 318 ELYRNLLCRTSQSLSIGLRLVQNSESAKFRHQL 220
+L LL + LSIGL L+ NSE KF L
Sbjct: 95 DLISRLLSGYQEPLSIGLLLIPNSEVLKFPESL 127
>Z48045-5|CAD56564.1| 374|Caenorhabditis elegans Hypothetical
protein C41C4.7b protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 LLVTLGACAYARTAIRQQSVNTQITSLS-DKDARTKARVHP-AFANAGRQAGVEIWRIQN 251
+L++ G C+ A T +R+ + + +TSLS K A T + P A+ N R++ V W I N
Sbjct: 245 VLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVG-WSIGN 303
>Z48045-4|CAA88102.2| 404|Caenorhabditis elegans Hypothetical
protein C41C4.7a protein.
Length = 404
Score = 27.5 bits (58), Expect = 7.6
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 78 LLVTLGACAYARTAIRQQSVNTQITSLS-DKDARTKARVHP-AFANAGRQAGVEIWRIQN 251
+L++ G C+ A T +R+ + + +TSLS K A T + P A+ N R++ V W I N
Sbjct: 245 VLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVG-WSIGN 303
>Z46791-6|CAA86759.1| 395|Caenorhabditis elegans Hypothetical
protein C09G5.7 protein.
Length = 395
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 126 QQSVNTQITSLSDKDARTKARVHPAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYK 299
+ S N+ +S S K RT+ + P N ++ G +W + + +P + + G+ K
Sbjct: 160 ESSHNSGQSSKSRKSQRTRGKSTPLDRNIFKENGEPVWVVPDRKPGELVMNEHGEMVK 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,957,953
Number of Sequences: 27780
Number of extensions: 323235
Number of successful extensions: 877
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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