Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E07
         (658 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.12 
SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)               34   0.12 
SB_25378| Best HMM Match : CNH (HMM E-Value=0.037)                     31   1.1  
SB_7016| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.4  

>SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 776

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +1

Query: 232 EIFICYAECGVFVDENGKRTRNEDPKWSAAVHGWEFVNPFLYIVGEEKVTI 384
           E  +C++  GVFVD+ G ++R  +  W +  H   + +P +    E  + +
Sbjct: 327 EYLLCFSLLGVFVDQTGFKSRRYELMWPSPPHHVAYSHPHVISFSERAIDV 377


>SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)
          Length = 952

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 232 EIFICYAECGVFVDENGKRTRNEDPKWSAAVHGWEFVNPFLYI 360
           E  +C+ E GVFV+  G++TR +   W+       +  PFL++
Sbjct: 775 EFLLCFNEFGVFVNGAGRQTREKTLMWTRLPLAVAYNAPFLFV 817


>SB_25378| Best HMM Match : CNH (HMM E-Value=0.037)
          Length = 346

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 235 IFICYAECGVFVDENGKRTRNEDPKWSAAVHGWEFVNPFLYIVG 366
           + +C  +  +  D  GK T+ +   WS      E+V P  Y++G
Sbjct: 144 LILCRDDMSIITDSEGKHTQKQSLTWSDTPMALEYVEP--YVIG 185


>SB_7016| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 472

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 19  FKISRSLTIDRPPTSLLLTSRYLFITGEKPLKINLP 126
           F++ RS T ++PP  L+ T  ++   G +   IN+P
Sbjct: 273 FRLVRSATAEQPPVRLVSTEVFVMGAGVQERSINVP 308


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,218,814
Number of Sequences: 59808
Number of extensions: 357061
Number of successful extensions: 942
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)