Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E07
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   5.9  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   5.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 316  HSTWDPR 296
            HSTWDPR
Sbjct: 1679 HSTWDPR 1685


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 328 RVPPHSTWDP 299
           R+PPH  W P
Sbjct: 99  RIPPHRLWKP 108


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 5/24 (20%), Positives = 14/24 (58%)
 Frame = -2

Query: 537 NYSIRSFTQNSRFVHFQVEYXRRV 466
           NY+  ++  N + +H+ + Y  ++
Sbjct: 321 NYNYNNYNNNYKPLHYNINYIEQI 344


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 310 WSAAVHGWEFVNPFLYIVGEEKVTIIYLSEEAYK 411
           +S  +  W+ +   L   G    TIIYLS + ++
Sbjct: 238 YSLGIVAWQMLFRKLPFAGLHSHTIIYLSAKGHR 271


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 306 QVECGGTRLGVC*PFLVHSRR 368
           +VE   T   V  PFL+ SRR
Sbjct: 393 EVEAAATARNVVAPFLIGSRR 413


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 207 YRFRWRLFFSCSGDRRFVHSER 142
           + + W L +   GD R V+ +R
Sbjct: 208 HHWHWHLVYPFEGDIRIVNKDR 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,107
Number of Sequences: 438
Number of extensions: 3872
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)