Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E06
(564 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit... 253 2e-66
UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4; Euk... 162 6e-39
UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, wh... 161 1e-38
UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit co... 160 2e-38
UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1; ... 157 2e-37
UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamo... 146 4e-34
UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2; ... 121 1e-26
UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytic... 107 1e-22
UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lambl... 104 2e-21
UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa... 100 5e-20
UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=... 96 6e-19
UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit, p... 93 3e-18
UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=... 80 3e-14
UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1; ... 77 2e-13
UniRef50_A3C0K6 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n... 73 5e-12
UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n... 73 6e-12
UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=... 71 2e-11
UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=... 69 1e-10
UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136, w... 66 5e-10
UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=... 65 9e-10
UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7; Sac... 64 2e-09
UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=... 60 4e-08
UniRef50_A3GFV9 Cluster: Protein involved in co-translational pa... 59 6e-08
UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n... 59 6e-08
UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=... 59 8e-08
UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=... 58 1e-07
UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=... 57 3e-07
UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=... 57 3e-07
UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n... 56 8e-07
UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit co... 54 2e-06
UniRef50_UPI00015BB126 Cluster: protein translocase subunit secY... 50 4e-05
UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=... 50 5e-05
UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=... 48 1e-04
UniRef50_A7QN16 Cluster: Chromosome undetermined scaffold_129, w... 48 2e-04
UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:... 41 0.023
UniRef50_Q839E4 Cluster: Preprotein translocase, SecY subunit; n... 36 0.49
UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3; ... 36 0.86
UniRef50_A5CPX6 Cluster: Putative trehalose-phosphatase; n=1; Cl... 35 1.5
UniRef50_Q75CK0 Cluster: ACL081Cp; n=1; Eremothecium gossypii|Re... 34 2.0
UniRef50_UPI000155C10D Cluster: PREDICTED: similar to HUMEEP, pa... 34 2.6
UniRef50_UPI00006CF25E Cluster: hypothetical protein TTHERM_0005... 33 3.5
UniRef50_Q6YR02 Cluster: Preprotein translocase subunit SecY; n=... 33 3.5
UniRef50_Q846R9 Cluster: Adventurous gliding motility protein V;... 33 3.5
UniRef50_A4X141 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q6CGQ5 Cluster: Similarity; n=2; Yarrowia lipolytica|Re... 33 3.5
UniRef50_UPI0000DD7A4F Cluster: PREDICTED: hypothetical protein;... 33 4.6
UniRef50_Q7T400 Cluster: Immediate early protein ICP0; n=6; Simp... 33 4.6
UniRef50_Q64VM1 Cluster: Major facilitator family transporter; n... 33 4.6
UniRef50_A6MVL9 Cluster: NADH dehydrogenase subunit 5; n=1; Myzo... 33 4.6
UniRef50_Q2B648 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
UniRef50_Q5VP21 Cluster: Putative uncharacterized protein OJ1159... 33 6.1
UniRef50_A1YKE3 Cluster: CCR4 associated factor-like protein; n=... 33 6.1
UniRef50_A4XUQ1 Cluster: 17 kDa surface antigen precursor; n=7; ... 32 8.1
UniRef50_Q7SG62 Cluster: Predicted protein; n=1; Neurospora cras... 32 8.1
UniRef50_Q55JA2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
>UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit
alpha isoform 2; n=176; Eukaryota|Rep: Protein transport
protein Sec61 subunit alpha isoform 2 - Homo sapiens
(Human)
Length = 476
Score = 253 bits (619), Expect = 2e-66
Identities = 118/129 (91%), Positives = 124/129 (96%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
KVR LREAFYRQNLPNLMNLIAT+FVFA+VIYFQGFRVDLPIKSARYRGQYSSYPIKLFY
Sbjct: 226 KVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 285
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSNIPIILQSALVSNLYVISQML+V+FSGNFLVNLLG WADV GGGPAR+YPVGGLCYYL
Sbjct: 286 TSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYL 345
Query: 362 SPPESLSHI 388
SPPES+ I
Sbjct: 346 SPPESMGAI 354
Score = 99.1 bits (236), Expect = 6e-20
Identities = 53/82 (64%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 321 PRAPIPSGGSAT-TCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAK 497
P P GG PP S F DP+ YI FMLGSCAFFSKTWI+VSGSSAK
Sbjct: 332 PARSYPVGGLCYYLSPPESMGAIF--EDPVHV-VVYIIFMLGSCAFFSKTWIEVSGSSAK 388
Query: 498 DVAKQLKEQQMVMRGHRDNSMI 563
DVAKQLKEQQMVMRGHRD SM+
Sbjct: 389 DVAKQLKEQQMVMRGHRDTSMV 410
>UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4;
Eukaryota|Rep: Protein transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 478
Score = 162 bits (393), Expect = 6e-39
Identities = 74/127 (58%), Positives = 97/127 (76%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K R L+EAFYR LPN+MNL+AT+ VFA VIY QGFR+++PIKS++ RGQ +YP+KLFY
Sbjct: 227 KTRALKEAFYRDRLPNIMNLLATVAVFAAVIYLQGFRIEIPIKSSKMRGQRGTYPVKLFY 286
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSN+PI+LQSAL SN++++SQMLA +F N LV LLGVW + P + V G+ YY+
Sbjct: 287 TSNMPIMLQSALTSNVFLVSQMLAGRFPDNLLVRLLGVWEPM-ENNPTQLGAVSGIAYYM 345
Query: 362 SPPESLS 382
S P SL+
Sbjct: 346 SAPHSLT 352
Score = 69.7 bits (163), Expect = 4e-11
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +3
Query: 378 SRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNS 557
S T DP T YI F++ +CA FSKTWI+VSGS +DVAKQLK+Q M + GHRD S
Sbjct: 350 SLTSALKDPFHT-VIYIAFIVTACALFSKTWIEVSGSGPRDVAKQLKDQNMTLAGHRDAS 408
Query: 558 M 560
+
Sbjct: 409 I 409
>UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=11; Eukaryota|Rep: Chromosome
undetermined scaffold_28, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 474
Score = 161 bits (391), Expect = 1e-38
Identities = 76/127 (59%), Positives = 97/127 (76%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K+ L+ A R +LPNL NL+AT+ VF IVIYFQGF+VD+PIK+ + RG +SYPIKLFY
Sbjct: 230 KISALQSAILRDSLPNLTNLLATVLVFLIVIYFQGFKVDIPIKNNKVRGGLTSYPIKLFY 289
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSNIPIILQ+ALVSNLY +SQ+L F GNFL+ LLG + ++ G + P+GGL YY+
Sbjct: 290 TSNIPIILQTALVSNLYFLSQILYRNFKGNFLIRLLGYYQELENG---QTVPIGGLVYYV 346
Query: 362 SPPESLS 382
SPP S+S
Sbjct: 347 SPPRSIS 353
Score = 82.2 bits (194), Expect = 8e-15
Identities = 46/77 (59%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 333 IPSGGSAT-TCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAK 509
+P GG PPRS S DPI T Y F+LG+CA FSKTWIDVSGSS KDVAK
Sbjct: 337 VPIGGLVYYVSPPRSISEAI--FDPIHT-ILYTAFILGTCAVFSKTWIDVSGSSPKDVAK 393
Query: 510 QLKEQQMVMRGHRDNSM 560
QLKEQ M + G+RD+SM
Sbjct: 394 QLKEQDMQIVGYRDSSM 410
>UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Preprotein translocase, SecY subunit
containing protein - Tetrahymena thermophila SB210
Length = 551
Score = 160 bits (388), Expect = 2e-38
Identities = 76/136 (55%), Positives = 97/136 (71%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K L+ AFYR +LPNL +LI+T +F +V+YFQGF+VD+ +K+ R RG SYPIKLFY
Sbjct: 306 KFVALQNAFYRSHLPNLASLISTALIFIVVVYFQGFKVDIALKNDRVRGAIQSYPIKLFY 365
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSN+PIILQSAL+SNLY SQ+L F+GNF+V LLG W+ GG + PVGGL YYL
Sbjct: 366 TSNMPIILQSALISNLYFFSQILYRNFNGNFIVGLLGKWSIPEAGG-SHMVPVGGLVYYL 424
Query: 362 SPPESLSHIRSXGPHS 409
SPP + + S H+
Sbjct: 425 SPPHGMIEVISDPLHT 440
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +3
Query: 399 DPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSM 560
DP+ T Y+ F+L +CA FSKTWI VSGSS KDVAKQLKEQ M + G RD+ +
Sbjct: 436 DPLHT-ILYVVFILTTCALFSKTWIQVSGSSVKDVAKQLKEQGMGLVGSRDSGL 488
>UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 377
Score = 157 bits (380), Expect = 2e-37
Identities = 75/127 (59%), Positives = 95/127 (74%)
Frame = +2
Query: 29 YRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQ 208
Y NLPN++NL+AT+ VF IVIYFQGFRV LP++S RGQ SYPIKLFYTSN+PIIL
Sbjct: 140 YGSNLPNVVNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILH 199
Query: 209 SALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLSHI 388
SAL++NLY ISQ+L ++SGNFLVNLLG W + G + PVGGL YY++ P SL+ +
Sbjct: 200 SALITNLYFISQLLYRRYSGNFLVNLLGKWKESEYSG--HSVPVGGLAYYVTAPSSLADV 257
Query: 389 RSXGPHS 409
+ H+
Sbjct: 258 LANPFHA 264
Score = 81.0 bits (191), Expect = 2e-14
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = +3
Query: 423 YIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSM 560
Y+ FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++
Sbjct: 267 YVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNL 312
>UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: Sec61 alpha subunit -
Entamoeba histolytica HM-1:IMSS
Length = 447
Score = 146 bits (353), Expect = 4e-34
Identities = 68/126 (53%), Positives = 91/126 (72%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K+ L +AF+R NL NLIAT+ VF V+YFQGF+VD+P+ S + R + +Y I+LFY
Sbjct: 199 KLGALYDAFFRTEAGNLSNLIATVVVFLTVMYFQGFKVDIPLSSKQGRVESQNYSIRLFY 258
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSN+PIIL SAL SN+++ISQ+L +F NFL+NL G W+ + G + YPVGGLCYYL
Sbjct: 259 TSNMPIILHSALTSNIFIISQLLFKRFPTNFLINLFGSWSAISSRG--QMYPVGGLCYYL 316
Query: 362 SPPESL 379
+ P SL
Sbjct: 317 TAPNSL 322
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +3
Query: 447 CAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRD 551
C FS+ WI VSGSS+ DV KQL +Q++ +RG RD
Sbjct: 343 CTIFSREWIKVSGSSSADVKKQLADQRVSIRGFRD 377
>UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2;
Apansporoblastina|Rep: ER PROTEIN-TRANSLOCATION COMPLEX
- Encephalitozoon cuniculi
Length = 410
Score = 121 bits (292), Expect = 1e-26
Identities = 59/126 (46%), Positives = 82/126 (65%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K + EAF+RQNLPNL +L++TI +F VIY QG RV+LP +S++ RG +PIKL Y
Sbjct: 163 KFAAIYEAFFRQNLPNLFSLLSTILLFVFVIYLQGMRVELPTESSQVRGHVGKFPIKLLY 222
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TS +PII QS +V ++ IS L ++ +V +LGVW GG R PV G+ YY+
Sbjct: 223 TSTMPIIAQSYIVGHISSISSFLYKRWPQYLVVRILGVWNTSKGG---RYMPVSGVSYYI 279
Query: 362 SPPESL 379
+ PES+
Sbjct: 280 TSPESI 285
Score = 33.1 bits (72), Expect = 4.6
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 372 SPSRTF-GQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHR 548
SP F G DP+ Y+ M + A S +W++++ S + A++LKE +M ++G R
Sbjct: 281 SPESIFEGFRDPLRF-VIYLAIMFLTSAILSTSWLELNELSPEKAAQKLKESRMRLKGVR 339
Query: 549 D 551
+
Sbjct: 340 E 340
>UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 485
Score = 107 bits (258), Expect = 1e-22
Identities = 51/118 (43%), Positives = 74/118 (62%)
Frame = +2
Query: 14 LREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNI 193
+ +F+RQNLPNL+ L ++ VF + IY FRVD+PIKS+R R +++P+KL YT ++
Sbjct: 249 IENSFFRQNLPNLLQLYMSVAVFMLTIYLNTFRVDIPIKSSRVRSLATAFPVKLLYTGSM 308
Query: 194 PIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSP 367
+ L SA N+ + SQ L V+F N +V +LG W G PVGG+ YY+SP
Sbjct: 309 CLFLLSAFSQNVLIYSQSLYVQFPDNLMVQVLGSWGADGS-------PVGGIAYYISP 359
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 423 YIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNS 557
Y + + C FSK W ++SGS+ KDVAKQ + Q +V+ G R S
Sbjct: 372 YSVYTIVGCTLFSKYWAEISGSAPKDVAKQFQAQSIVIVGQRAQS 416
>UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_10951_12423 - Giardia lamblia
ATCC 50803
Length = 490
Score = 104 bits (249), Expect = 2e-21
Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSS-YPIKLF 178
K++ ++ AF+R L N+MN+IAT+ VF + IY QG + +L I+ A+ YPI+L
Sbjct: 245 KLKAIKLAFFRDGLTNVMNIIATLVVFLVAIYLQGIKRNLRIQHAKAGPSVQQQYPIRLL 304
Query: 179 YTSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYY 358
Y S+ P+++ S L SN+++ISQ + +F + LLG WA+V P +A+P GGL +
Sbjct: 305 YASSTPMMIISTLTSNVFMISQAIWRRFGNSIFTALLGTWAEV-ESRPGQAFPTGGLAWI 363
Query: 359 LSPPESL 379
L+ P SL
Sbjct: 364 LASPYSL 370
>UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0512000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 466
Score = 99.5 bits (237), Expect = 5e-20
Identities = 54/136 (39%), Positives = 80/136 (58%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K+ + +AFYRQNLPN++N +AT + I+FQGF + LP+++ R Y IKL +
Sbjct: 223 KLSAMSKAFYRQNLPNIINFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCH--IKLSH 280
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
P++L L+ YV S++L K+SGN LVNLLG W + G ++ PVGG+ YYL
Sbjct: 281 FLYGPVVLHRLLLPLPYVASKVLYKKYSGNTLVNLLGKWDGLNHFG--QSIPVGGIVYYL 338
Query: 362 SPPESLSHIRSXGPHS 409
P L+ + H+
Sbjct: 339 RTPPILADLHRDPFHA 354
>UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=2;
Thermoprotei|Rep: Preprotein translocase secY subunit -
Cenarchaeum symbiosum
Length = 478
Score = 95.9 bits (228), Expect = 6e-19
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +2
Query: 20 EAFYRQN-LPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIP 196
+ F+R N LP++ L+ T V I++Y QG ++++PI S +YRG ++YPIKL Y SNIP
Sbjct: 229 DIFFRYNQLPSIFGLLLTGGVLLILVYTQGMKIEIPIVSTKYRGFSATYPIKLMYVSNIP 288
Query: 197 IILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPES 376
+IL SAL +N I QM F+ L V A P+ P+GG+ YY++PP
Sbjct: 289 VILASALTANAIFIGQMFWSNFNPRNDNIFLNVLAQFDLTNPST--PIGGIVYYITPPRG 346
Query: 377 L 379
L
Sbjct: 347 L 347
Score = 38.3 bits (85), Expect = 0.12
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 363 PPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRG 542
PPR DP+ Y+ FM+G F K W+++ G S K AK L + + + G
Sbjct: 343 PPRGLD--IAALDPMRA-VGYVLFMIGIVVVFGKLWVELGGLSPKSAAKNLLDADVQIPG 399
Query: 543 HR 548
R
Sbjct: 400 FR 401
>UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit,
putative; n=5; Trichomonas vaginalis G3|Rep: Preprotein
translocase, SecY subunit, putative - Trichomonas
vaginalis G3
Length = 484
Score = 93.5 bits (222), Expect = 3e-18
Identities = 44/126 (34%), Positives = 71/126 (56%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K+R LR+ +R LPNL L +T+ VF IYF ++++ +++ R + + IKLFY
Sbjct: 227 KLRALRDIVFRPQLPNLCQLFSTVIVFGACIYFDQIKINVGLETTVNRARPEPFEIKLFY 286
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
SN P+I+QS ++S L S+ + + + + GVW G + PV GL YYL
Sbjct: 287 CSNTPLIIQSTILSQLAGFSRTIYFHWPESLATQIFGVWRSHNGMSYDYSTPVSGLIYYL 346
Query: 362 SPPESL 379
+ P+S+
Sbjct: 347 TAPQSI 352
Score = 41.9 bits (94), Expect = 0.010
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 366 PRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGH 545
P+S +T DP+ T Y+ F L S F S ++ S + DVA+ LK+Q + ++GH
Sbjct: 349 PQSIQQTI--HDPLHT-IIYLIFSLSSAGFISYYYLRFSNQAPADVAEALKKQHLTLKGH 405
Query: 546 RDN 554
R++
Sbjct: 406 RED 408
>UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=5;
Thermoplasmatales|Rep: Preprotein translocase secY
subunit - Picrophilus torridus
Length = 587
Score = 80.2 bits (189), Expect = 3e-14
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Frame = +2
Query: 11 GLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSN 190
G+ + + Q P ++ L+ T+ +F IV YFQ +++LPI R RG YP++L Y SN
Sbjct: 306 GMEQILFAQPNP-MIALLGTVLIFFIVAYFQSSKIELPIAHERVRGARGRYPLQLLYASN 364
Query: 191 IPIILQSALVSN------LYVISQMLA-VKFSGNFLVNLLGVW---ADVGGGGPARAYPV 340
IP+IL +AL++N L+ S +L+ + G+ LLGV+ A G + P+
Sbjct: 365 IPVILATALLANISMWTLLFWKSPVLSRIPILGH--DKLLGVYPTAAQASALGISSTTPI 422
Query: 341 GGLCYYLSPPESLS 382
GGL YYL P LS
Sbjct: 423 GGLAYYLYTPNGLS 436
>UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C19G7.17 - Schizosaccharomyces pombe (Fission yeast)
Length = 475
Score = 77.4 bits (182), Expect = 2e-13
Identities = 42/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K LR +R + + + I VFA +Y R+D+PI+S+R RG ++P+KL Y
Sbjct: 230 KFSSLRSILFRSEGLSFVQFLVCIAVFATFMYTLNIRIDVPIRSSRVRGVRQNFPLKLLY 289
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TS IP+I +++S+L V + L + + LL ++ + + VGGL Y+L
Sbjct: 290 TSVIPLIYFYSILSHLLVFAYALYSLCPNSLITRLLVQYSPIDTFAEHKLQLVGGLVYFL 349
Query: 362 SPPESLS 382
PP LS
Sbjct: 350 YPPLGLS 356
Score = 33.1 bits (72), Expect = 4.6
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 423 YIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMI 563
Y ++ +FS W++ + +DV KE Q+V+ G+R+ +M+
Sbjct: 368 YTITLICITIYFSLLWMNATAGGPRDVLLFFKENQLVIAGYREATML 414
>UniRef50_A3C0K6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 215
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 53 MNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLY 232
M L+AT V ++ +GFRV LP++S RG+ + PIKL YTS +P++L SA VS+LY
Sbjct: 1 MGLLATCVVLLATVFLEGFRVMLPLRSRDARGRQLALPIKLLYTSTMPVVLHSAAVSSLY 60
Query: 233 VISQMLAV-KFSGNFLVNL 286
+SQ+L +F+G+ L +L
Sbjct: 61 TVSQLLHYSRFAGSLLGHL 79
>UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n=2;
Methanococcus|Rep: Preprotein translocase, SecY subunit
- Methanococcus aeolicus Nankai-3
Length = 443
Score = 72.9 bits (171), Expect = 5e-12
Identities = 41/113 (36%), Positives = 61/113 (53%)
Frame = +2
Query: 50 LMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNL 229
L+ ++ TI VF IV+Y + RV++P+ R RG YPIK Y SN+P+IL AL +N+
Sbjct: 216 LLPILGTIIVFLIVVYAESMRVEIPLAHGRVRGAVGKYPIKFIYVSNLPVILAMALFANV 275
Query: 230 YVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLSHI 388
++ M+ K LLG + D RA V G+ YY + P L+ +
Sbjct: 276 QLVGLMVQSKLG----YPLLGSFVD------GRA--VSGIAYYFATPYGLTSV 316
>UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n=1;
Staphylothermus marinus F1|Rep: Preprotein translocase,
SecY subunit - Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1)
Length = 476
Score = 72.5 bits (170), Expect = 6e-12
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +2
Query: 47 NLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 226
+L+ LI T + +++Y +G +V++P+ S R R + P+K Y +NIP++L L S+
Sbjct: 240 DLVGLIVTFVIIFLLVYLEGMKVEIPVTSPRLRSIKTKVPLKFLYVTNIPVLLVGILYSD 299
Query: 227 LYVISQMLAVKFSGNFLVNLLGVW-ADVGGGGPARAYPVGGLCYYLSPPESLS 382
+ V + + + +L N++ W A++ A GGL YYLSPP SL+
Sbjct: 300 ILVFASLTRL-----YLQNIVPDWVANMLATYDANGRLTGGLAYYLSPPGSLA 347
>UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=10;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Methanococcus vannielii
Length = 438
Score = 70.5 bits (165), Expect = 2e-11
Identities = 40/120 (33%), Positives = 66/120 (55%)
Frame = +2
Query: 50 LMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNL 229
++ +++T+FVF +V+Y + RV++P+ R +G YPIK Y SN+P+IL +AL +N+
Sbjct: 211 ILPILSTLFVFLVVVYVESIRVEIPLAHGRVKGAVGKYPIKFIYVSNLPVILAAALFANI 270
Query: 230 YVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLSHIRSXGPHS 409
L F +LG +++ G A V G+ YY S P +S+I S H+
Sbjct: 271 -----QLWGMFLDRMGYPILGQYSN----GTA----VSGIAYYFSTPYGISNIISDPLHA 317
>UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=4;
Thermococcaceae|Rep: Preprotein translocase subunit secY
- Pyrococcus furiosus
Length = 468
Score = 68.5 bits (160), Expect = 1e-10
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Frame = +2
Query: 23 AFYRQ-NLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRG--QYSSYPIKLFYTSNI 193
A YR + P++++++ATI VF IV+YF+ RV++P+ YRG SYPI+ Y SNI
Sbjct: 231 AIYRGGSAPDMLSVVATIVVFFIVVYFESMRVEIPL---GYRGVTVRGSYPIRFLYVSNI 287
Query: 194 PIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPE 373
PIIL AL +N+ + +++L L W +G P P+ G Y+ PP
Sbjct: 288 PIILTFALYANIQLWARVLD---------RLGHPW--LGRFDPTTGSPISGFVLYVIPPR 336
Query: 374 SL 379
++
Sbjct: 337 NI 338
>UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_136,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 66.1 bits (154), Expect = 5e-10
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = +3
Query: 399 DPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSM 560
DPI + Y F+ G CA SKTWIDVSGSS +VAKQLKEQ M + G+RD+SM
Sbjct: 263 DPI-NKVLYTAFIHGICAVLSKTWIDVSGSSPNEVAKQLKEQDMKIVGYRDSSM 315
>UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=1;
Aeropyrum pernix|Rep: Preprotein translocase subunit
secY - Aeropyrum pernix
Length = 457
Score = 65.3 bits (152), Expect = 9e-10
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 44 PNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVS 223
P+L T+ +++Y Q RV++PI S R++G S P++ Y +NIPI+L LVS
Sbjct: 229 PDLTGFFTTLAAIILLVYLQAMRVEIPITSERFKGIRSRVPLQFIYVTNIPILLVGILVS 288
Query: 224 NLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPV-GGLCYYLSPPESL 379
+L ++ ++LA + LGV +RAY + + YYLSPP +
Sbjct: 289 DLLLVQRLLA---------DYLGV--------ESRAYQIYSSIVYYLSPPRGV 324
>UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7;
Saccharomycetales|Rep: Sec sixty-one protein homolog -
Saccharomyces cerevisiae (Baker's yeast)
Length = 490
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +2
Query: 5 VRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYT 184
+ G+ AF R LPNL I + + IV Y Q RV+LPI+S R RG + YPIKL YT
Sbjct: 232 IGGIISAFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYT 291
Query: 185 SNIPIILQSALVSNL----YVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLC 352
+ ++ ++ + +V+ Q++A + + ++G + + +P+
Sbjct: 292 GCLSVLFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHYENANNLLAVPTFPLS--- 348
Query: 353 YYLSPPES 376
L+PP S
Sbjct: 349 -LLAPPTS 355
Score = 41.5 bits (93), Expect = 0.013
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +3
Query: 333 IPSGGSATTCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQ 512
+P+ + PP S + Q P+ T +Y F+L + +F+ W +SGSSA+DVA +
Sbjct: 342 VPTFPLSLLAPPTSFFKGVTQ-QPL-TFITYSAFILVTGIWFADKWQAISGSSARDVALE 399
Query: 513 LKEQQMVMRGHRDNSM 560
K+Q + + G R+ ++
Sbjct: 400 FKDQGITLMGRREQNV 415
>UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=2;
environmental samples|Rep: Preprotein translocase
subunit SecY - uncultured marine group II euryarchaeote
HF70_59C08
Length = 604
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +2
Query: 44 PN-LMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALV 220
PN ++ L +++ VF +V Y + +++LP+ + RG YPI+L Y SNIP+IL +AL+
Sbjct: 338 PNAVVALFSSVVVFLVVAYAESSKLELPLTHGKVRGHRGQYPIRLVYASNIPVILMAALL 397
Query: 221 SNL 229
+NL
Sbjct: 398 ANL 400
Score = 37.9 bits (84), Expect = 0.16
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 420 SYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSMI 563
+Y+ M F+K WI+ + AKDVAKQ++ M + G R N +
Sbjct: 483 TYVTVMTLGSMMFAKFWIETTNMGAKDVAKQIENTGMQIPGFRKNPKV 530
>UniRef50_A3GFV9 Cluster: Protein involved in co-translational
pathway of protein transport; n=6;
Saccharomycetales|Rep: Protein involved in
co-translational pathway of protein transport - Pichia
stipitis (Yeast)
Length = 501
Score = 59.3 bits (137), Expect = 6e-08
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +2
Query: 23 AFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPII 202
+F R LPN T+ V+Y Q R++LPI+S R RG + +PI+L YT +P++
Sbjct: 248 SFTRLQLPNFTLFYITVATTLAVVYLQNLRIELPIRSTRARGMNNVFPIRLLYTGALPVL 307
Query: 203 LQSALVSNL----YVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPP 370
+++N+ Y+ +L +F ++++ + ++ G L ++ S P
Sbjct: 308 FAYTVIANIQYFGYLAYVVLQKANVSSFALSIIASF-NLDSYSNRLNLTSGALYFFSSSP 366
Query: 371 ESLSHIRS 394
LS I S
Sbjct: 367 SLLSTILS 374
Score = 38.7 bits (86), Expect = 0.093
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +3
Query: 372 SPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRD 551
SPS PI T Y ++ +F++ W +SGS+ KD++KQ K+Q + + G RD
Sbjct: 365 SPSLLSTILSPIRT-VVYSATVIVLATWFAEKWSYISGSAPKDISKQFKDQGISISGKRD 423
Query: 552 NSM 560
S+
Sbjct: 424 ISI 426
>UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n=1;
Thermofilum pendens Hrk 5|Rep: Preprotein translocase,
SecY subunit - Thermofilum pendens (strain Hrk 5)
Length = 476
Score = 59.3 bits (137), Expect = 6e-08
Identities = 30/113 (26%), Positives = 55/113 (48%)
Frame = +2
Query: 44 PNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVS 223
P+L+ + + + ++ Y + ++ +P+ S R+ G + P+K Y S +P+IL AL +
Sbjct: 235 PDLVGFVGMVVMLLLLTYMESMKITIPVSSVRFGGAKTRIPLKFLYVSVMPVILVGALYA 294
Query: 224 NLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLS 382
N+ + +Q L + + L V A G YY+SPP SL+
Sbjct: 295 NVVMFTQALWPRVNPGNQNPWLNVIAKYNYTEYGPVPLPGSFVYYISPPRSLA 347
>UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=4;
Methanomicrobiales|Rep: Preprotein translocase secY
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 479
Score = 58.8 bits (136), Expect = 8e-08
Identities = 33/107 (30%), Positives = 58/107 (54%)
Frame = +2
Query: 47 NLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 226
+L+ I TI +F +++Y + RV++P+ + RG + +P+KL Y S +P+IL L +N
Sbjct: 236 DLIAFITTIAIFILIVYVESTRVEIPLAHTQVRGARARFPVKLIYASVLPMILVRVLQAN 295
Query: 227 LYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSP 367
+ QM+ + F N + + G + P GGL +YL+P
Sbjct: 296 V----QMIGL-FLNNIGITIFGTFEG--------QTPTGGLMWYLAP 329
>UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=1;
Hyperthermus butylicus DSM 5456|Rep: Preprotein
translocase subunit secY - Hyperthermus butylicus
(strain DSM 5456 / JCM 9403)
Length = 464
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/74 (33%), Positives = 45/74 (60%)
Frame = +2
Query: 32 RQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQS 211
R+ +P+++ +ATI + ++IYFQ RV +P+ S RY + P+ Y +NIPI+ +
Sbjct: 235 RRGMPDMVGFLATIAIIMVLIYFQLMRVYIPVTSPRYGSIKTRIPLNFIYVTNIPILFVA 294
Query: 212 ALVSNLYVISQMLA 253
VS++ V ++A
Sbjct: 295 IAVSDIKVFEIVIA 308
>UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=1;
Caldivirga maquilingensis IC-167|Rep: Preprotein
translocase secY subunit - Caldivirga maquilingensis
IC-167
Length = 482
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +2
Query: 29 YRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQ 208
YR NLP L+ LIATI + + Y + V +P+ +Y G SYP K+ Y S +PII
Sbjct: 234 YRFNLPGLIGLIATIVLGGFIAYVELMEVRIPLSFVQYGGYKMSYPFKVMYVSVLPIIFT 293
Query: 209 SALVSNLY 232
+ V+ +Y
Sbjct: 294 AYTVALIY 301
>UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=44;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Archaeoglobus fulgidus
Length = 493
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 50 LMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNL 229
++ LI T + +V++F+G RV++P+ A RG +PIKL Y S +P+I AL +N+
Sbjct: 246 ILALITTAAIILLVVFFEGTRVEIPLAHAVARGARGRFPIKLIYASVLPMIFVRALQANV 305
Query: 230 YVISQML 250
+ Q+L
Sbjct: 306 VALGQVL 312
>UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n=6;
Euryarchaeota|Rep: Preprotein translocase, SecY subunit
- Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 537
Score = 55.6 bits (128), Expect = 8e-07
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 23/129 (17%)
Frame = +2
Query: 50 LMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNL 229
L+ LI+T+ + +V+ + R+++P+ +R RG +P+KL Y S +P+IL AL +N+
Sbjct: 249 LLALISTVGIILLVVLVESTRIEIPLAHSRVRGARGRFPVKLVYASVLPMILVRALQANI 308
Query: 230 YVISQMLAVKFS----------GNFLV-----NLLGVWA-----DVGGGGPARA---YPV 340
++ +L K G +V + LG + D G P A PV
Sbjct: 309 EMLGALLTAKLGTVTTAETTAEGVRIVYTGYQSWLGTFLSSAKFDAATGAPISATSPQPV 368
Query: 341 GGLCYYLSP 367
GL YYLSP
Sbjct: 369 SGLMYYLSP 377
>UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit
containing protein; n=3; Oryza sativa|Rep: Preprotein
translocase, SecY subunit containing protein - Oryza
sativa subsp. japonica (Rice)
Length = 461
Score = 54.4 bits (125), Expect = 2e-06
Identities = 42/126 (33%), Positives = 55/126 (43%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K L R +LPNL N + T +F + + + +S RG PIKL Y
Sbjct: 243 KAGALLFTLLRLDLPNLSNYMTTCVMFVLAVRLDETHLRRLYRSRPRRGTDEFVPIKLLY 302
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TS +PI+L ++ VS V D GGG AYPVGGL YY+
Sbjct: 303 TSAMPIMLHASAVSAFCV----------------------DAGGGA---AYPVGGLVYYV 337
Query: 362 SPPESL 379
+PP L
Sbjct: 338 TPPSKL 343
>UniRef50_UPI00015BB126 Cluster: protein translocase subunit
secY/sec61 alpha; n=1; Ignicoccus hospitalis KIN4/I|Rep:
protein translocase subunit secY/sec61 alpha -
Ignicoccus hospitalis KIN4/I
Length = 479
Score = 50.0 bits (114), Expect = 4e-05
Identities = 17/67 (25%), Positives = 38/67 (56%)
Frame = +2
Query: 41 LPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALV 220
+P+L+ +AT+ + A + Y ++ +P+ RG P+ L Y +NIP++L + +
Sbjct: 262 MPDLIGFLATVVMIAAIAYLSSVKIQVPLVVKEMRGMRIKIPLNLLYVTNIPVLLAAIIF 321
Query: 221 SNLYVIS 241
+N+ ++
Sbjct: 322 ANIQTVA 328
>UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=4;
Sulfolobaceae|Rep: Preprotein translocase subunit secY -
Sulfolobus solfataricus
Length = 469
Score = 49.6 bits (113), Expect = 5e-05
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +2
Query: 44 PNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVS 223
P+L+ L+ TI + I IY +++P+ S + RG + P+ Y S+IP+I + L S
Sbjct: 240 PDLVGLVTTIALIIITIYLTTMTIEIPVTSQKLRGIRRTIPLNFLYVSSIPVIFVAVLGS 299
Query: 224 NLYVISQMLAV--KFSGNFLVNLLGVW 298
++ + + + + + N L + GV+
Sbjct: 300 DIQLFASLASYVSPSASNILNTVSGVF 326
>UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=4;
Pyrobaculum|Rep: Preprotein translocase secY subunit -
Pyrobaculum aerophilum
Length = 459
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/71 (29%), Positives = 45/71 (63%)
Frame = +2
Query: 41 LPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALV 220
LP+ + LI+T+ + I++Y + +V++P+ + +YRG + P++ Y S +PII +
Sbjct: 245 LPDFIGLISTLLLAYIILYLEMMKVNIPVTAGQYRGIKFTIPLRFVYVSVLPIIFTT--- 301
Query: 221 SNLYVISQMLA 253
+L ++ Q+L+
Sbjct: 302 YSLLLVGQLLS 312
>UniRef50_A7QN16 Cluster: Chromosome undetermined scaffold_129,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_129, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 116
Score = 48.0 bits (109), Expect = 2e-04
Identities = 40/120 (33%), Positives = 51/120 (42%)
Frame = +3
Query: 159 HIRSSCSTLQIYQSFCSQRLFPTSTSYLRCWQ*SSAVTSW*TCWVCGRTWGAAAPRAPIP 338
HI SCST SF + LFPT T Y C + S +CG+ + I
Sbjct: 8 HILLSCSTPPTCPSFYNLLLFPTFTLYPSCCIGGTVEISL-NLNICGQYISGGGLASYI- 65
Query: 339 SGGSATTCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLK 518
+A +C + F YI FM +C F KTWI+V S A +V KQLK
Sbjct: 66 ---TALSCLVDMAANPFHAF-------FYILFMFAACTLFEKTWIEVCRSYATNVVKQLK 115
>UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:
NEQ168 - Nanoarchaeum equitans
Length = 476
Score = 40.7 bits (91), Expect = 0.023
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +2
Query: 14 LREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNI 193
+ + Y + + + L+ + V + +YF ++ +P + + Y ++L YT NI
Sbjct: 233 ISQGLYTEAIVVGLQLLVIVLVILLSVYFYMVKIPIPTSFGKIPEKSLRYEVRLIYTGNI 292
Query: 194 PIILQSALVSNLYVISQML 250
P+I A + + +I+ +L
Sbjct: 293 PVIFAFAFLHQILLIAWVL 311
>UniRef50_Q839E4 Cluster: Preprotein translocase, SecY subunit;
n=13; Lactobacillales|Rep: Preprotein translocase, SecY
subunit - Enterococcus faecalis (Streptococcus faecalis)
Length = 432
Score = 36.3 bits (80), Expect = 0.49
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 59 LIATIFVFAIVIYFQGFRVDLPIK-SARYRGQ-YSSY-PIKLFYTSNIPIILQSALVSNL 229
+IA + + +V +FQ +PI+ + R G SSY P+K+ IP+I S+L++
Sbjct: 222 VIAILVIVTVVTFFQQAERKIPIQYTKRVSGAPTSSYLPLKVNAAGVIPVIFASSLIATP 281
Query: 230 YVISQMLAVKFSG 268
I Q + KF+G
Sbjct: 282 NAILQAFSSKFAG 294
>UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 384
Score = 35.5 bits (78), Expect = 0.86
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2
Query: 158 SYPIKLFYTSNIPIILQSALVSNLYV-ISQMLAVKFSG-NFLVNLLGVWADVGGGGPARA 331
+YP + + +L ++ N ++ + ML++K+ N +VN+LG+W ++ P
Sbjct: 212 AYPWMMMLATLAFFLLVLIILGNHHITLPPMLSIKYGETNKVVNMLGIWKEM-RQYPGHY 270
Query: 332 YPVGGLCYYLSPP 370
+PV G+ Y++ P
Sbjct: 271 WPVSGIASYITTP 283
>UniRef50_A5CPX6 Cluster: Putative trehalose-phosphatase; n=1;
Clavibacter michiganensis subsp. michiganensis NCPPB
382|Rep: Putative trehalose-phosphatase - Clavibacter
michiganensis subsp. michiganensis (strain NCPPB 382)
Length = 275
Score = 34.7 bits (76), Expect = 1.5
Identities = 25/94 (26%), Positives = 42/94 (44%)
Frame = -3
Query: 562 IIELSRCPRITICCSFNCFATSLAEDPETSIQVLEKNAQEPSMKKM*EQRVGMGSX*PNV 383
+ EL+R PR+ + F+ +DPE + V E A ++ + E RV + S
Sbjct: 24 LTELARTPRLLVALDFDGTLAPEVDDPEKARAVPEARAAVLALLALPETRVALVSG---- 79
Query: 382 REGLRGGQVVAEPPDGIGARGAAAPHVRPHTQQV 281
LR + VA+ PD + G+ +R T +
Sbjct: 80 -RALRSLEAVADLPDDVLLVGSHGVEIRLDTDDI 112
>UniRef50_Q75CK0 Cluster: ACL081Cp; n=1; Eremothecium gossypii|Rep:
ACL081Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 593
Score = 34.3 bits (75), Expect = 2.0
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 92 IYFQGFRVDL-PIKSARYRGQYSSYPIKLFYTSNIPIILQSAL---VSNLYVISQMLAVK 259
++ GF L P S Y S + FY SN P + L +SN Y I M +
Sbjct: 274 VFVSGFNTWLIPGMSLWYNTLKDSRGVDFFYVSNSPFQIYPTLRQYISNEYPIGPMFLKQ 333
Query: 260 FSGNFLVNLLGVWADV 307
+SGN L +L+ A +
Sbjct: 334 YSGNLLSSLMSSTAAI 349
>UniRef50_UPI000155C10D Cluster: PREDICTED: similar to HUMEEP,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to HUMEEP, partial - Ornithorhynchus anatinus
Length = 410
Score = 33.9 bits (74), Expect = 2.6
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 297 GRTWGAAAPRAPIPSGGSATTCPPRSPSRTFGQXDPIP 410
G T + PR P+PSGG PPR P R Q P+P
Sbjct: 12 GSTRRRSGPR-PLPSGGRGPRRPPRRPPRRPPQRPPVP 48
>UniRef50_UPI00006CF25E Cluster: hypothetical protein
TTHERM_00056150; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00056150 - Tetrahymena
thermophila SB210
Length = 884
Score = 33.5 bits (73), Expect = 3.5
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 14 LREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSN 190
L FY +P+L+ I TI F ++ ++ F+ D K +Y+ + Y ++L Y SN
Sbjct: 538 LNNYFYNTQIPSLLFTIFTILHFICIVTYK-FKFDQKHKVEQYKLKQLQYIVQLNYLSN 595
>UniRef50_Q6YR02 Cluster: Preprotein translocase subunit SecY; n=18;
Candidatus Phytoplasma asteris|Rep: Preprotein
translocase subunit SecY - Onion yellows phytoplasma
Length = 413
Score = 33.5 bits (73), Expect = 3.5
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 38 NLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSY-PIKLFYTSNIPIILQSA 214
N ++ L+ +F +V+ ++ PI AR + Q SY P+K+ +P+IL SA
Sbjct: 201 NFACIVLLLLLFLIFTVVVQITSLKI--PINYARNQVQGKSYIPLKINSAGVMPVILASA 258
Query: 215 LVSNLYVISQMLA-VKFS 265
L+ +++ ++ KF+
Sbjct: 259 LLQPFQMLAGVIGNTKFT 276
>UniRef50_Q846R9 Cluster: Adventurous gliding motility protein V; n=1;
Myxococcus xanthus|Rep: Adventurous gliding motility
protein V - Myxococcus xanthus
Length = 1151
Score = 33.5 bits (73), Expect = 3.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 382 REGLRGGQVVAEPPDGIGARGAAAPHVRPHTQQVHQEVTAELYCQ-HLRY 236
R G +GG+V G+ +A PH R H +Q V A+++ HLR+
Sbjct: 1037 RAGDQGGEVTRHRAAGVAHVLSARPHARAHEEQADGHVLAQVHAHLHLRH 1086
>UniRef50_A4X141 Cluster: Putative uncharacterized protein; n=1;
Salinispora tropica CNB-440|Rep: Putative
uncharacterized protein - Salinispora tropica CNB-440
Length = 933
Score = 33.5 bits (73), Expect = 3.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 306 WGAAAPRAPIPSGGSATTCPPRSPSRTFGQXDPIP 410
WG A P P P+ SA PPRS + Q P P
Sbjct: 241 WGTAQPPEPSPAPASAGWAPPRSTEPAWTQQQPPP 275
>UniRef50_Q6CGQ5 Cluster: Similarity; n=2; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 344
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -2
Query: 563 DHRVVAMSAHHHLLLFQLLRNILSGGSGDIDPGLREERAGAEHEE 429
DHR+ A+ A + + + Q+ R GG DI P L EE A A EE
Sbjct: 169 DHRIKAVGAVNCVNIGQMFREGWEGGRKDIAPHLLEEGAEARTEE 213
>UniRef50_UPI0000DD7A4F Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 275
Score = 33.1 bits (72), Expect = 4.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 291 VCGRTWGAAAPRAPIPSGGSATTCPPRSPSRTFGQXDPI-PTRC 419
+C W A P P P G +A PP P R Q DP+ P RC
Sbjct: 187 LCRSRWVLAPPPPPAPPGPNAAAHPPLRPPRARLQ-DPVDPERC 229
>UniRef50_Q7T400 Cluster: Immediate early protein ICP0; n=6;
Simplexvirus|Rep: Immediate early protein ICP0 -
Cercopithecine herpesvirus 1 (CeHV-1) (Simian herpes B
virus)
Length = 700
Score = 33.1 bits (72), Expect = 4.6
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 297 GRTWGAAAPRAPIPSGGSAT----TCPPRSPSRTFGQXDP 404
G GAAAPRAP P+G A PP SP R G P
Sbjct: 267 GGARGAAAPRAPAPAGNPAPIVIGDSPPASPRRPSGAAAP 306
>UniRef50_Q64VM1 Cluster: Major facilitator family transporter;
n=14; Bacteroidetes|Rep: Major facilitator family
transporter - Bacteroides fragilis
Length = 412
Score = 33.1 bits (72), Expect = 4.6
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 LFYTSNIPIILQ---SALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGG 319
+F +N+PI+ Q S + Y I M V F+G F+ +LLG W D G G
Sbjct: 333 IFDANNMPILCQFVSSKYRATAYGIMNMTGV-FAGAFITDLLGKWTDGGNLG 383
>UniRef50_A6MVL9 Cluster: NADH dehydrogenase subunit 5; n=1;
Myzostoma seymourcollegiorum|Rep: NADH dehydrogenase
subunit 5 - Myzostoma seymourcollegiorum
Length = 557
Score = 33.1 bits (72), Expect = 4.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 26 FYRQNLPNLMNLIATIFVFAIVIYF 100
FY N+ N MN++ ++F+F +V+YF
Sbjct: 530 FYSNNMNNFMNMMNSMFIFFVVMYF 554
>UniRef50_Q2B648 Cluster: Putative uncharacterized protein; n=2;
Bacillus|Rep: Putative uncharacterized protein -
Bacillus sp. NRRL B-14911
Length = 208
Score = 32.7 bits (71), Expect = 6.1
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 11 GLREAFYRQNLPNLMNLIATIFVFAIVIYFQGF---RVDLPIKSARYRGQYSSYPIKLFY 181
GL E +R P + +IA I F + F+G L + S + + Y F
Sbjct: 88 GLNERIFRNRNPLHIAVIAAIVAFCEELLFRGVIQTHFGLLVSSIIFAAVHYRYLFNWFL 147
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVN-LLGV 295
NI I+ S L+ +Y+ + LAV +FL++ LLG+
Sbjct: 148 FVNI--IVLSFLIGIIYLKTGNLAVTIVMHFLIDFLLGI 184
>UniRef50_Q5VP21 Cluster: Putative uncharacterized protein
OJ1159_D09.10-1; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1159_D09.10-1 - Oryza sativa subsp. japonica (Rice)
Length = 146
Score = 32.7 bits (71), Expect = 6.1
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 258 SSAVTSW*TCWVCGRTWGAAAPRAPIPSGGSATTCPPRSPSR 383
+S +T W C CGRT GA PR P+G ++ PR +R
Sbjct: 88 TSLLTRW-GCHSCGRT-GAGGPRGTSPTGPTSRWAAPRRSAR 127
>UniRef50_A1YKE3 Cluster: CCR4 associated factor-like protein; n=1;
Brachypodium sylvaticum|Rep: CCR4 associated factor-like
protein - Brachypodium sylvaticum (False brome)
Length = 291
Score = 32.7 bits (71), Expect = 6.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 258 SSAVTSW*TCWVCGRTWGAAAPRA-PIPSGGSATTCPPRSPSRTFGQXDPIP 410
SSA T + C W + AP A P PS GS+T+ P+ T + P P
Sbjct: 149 SSAATPTSSATCCSWAWHSWAPGAGPTPSSGSSTSAASTRPAATRTRRPPSP 200
>UniRef50_A4XUQ1 Cluster: 17 kDa surface antigen precursor; n=7;
Pseudomonas|Rep: 17 kDa surface antigen precursor -
Pseudomonas mendocina ymp
Length = 298
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 251 AVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLSHIRS 394
++ F+G F + LLG A VGGG ++ YY + E +SH+R+
Sbjct: 12 SLMFAGAFSILLLGGCASVGGGVSSKVAKTTQANYYPACYEPVSHLRA 59
>UniRef50_Q7SG62 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 273
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -2
Query: 500 ILSGGSGDIDPGLREERAGAEHEEDVGAARGNGVXLTECAR 378
+LS GSG D G E G RG G LT CAR
Sbjct: 223 VLSNGSGHADGGGTGNGGADEKRNGNGGNRGTGTGLTPCAR 263
>UniRef50_Q55JA2 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 439
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 300 RTWGAAAPRAPIPSGGSATTCPPRSPSRTFGQ 395
R W A +P AP+ S S T P +PSRTF Q
Sbjct: 54 RDWSAPSPSAPLISSSSTTASVP-APSRTFLQ 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,922,981
Number of Sequences: 1657284
Number of extensions: 11010566
Number of successful extensions: 43803
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 41404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43744
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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