Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E06
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 176 1e-44
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 176 1e-44
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 175 2e-44
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 100 2e-21
09_04_0707 + 19645471-19646112 98 4e-21
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 89 3e-18
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 71 8e-13
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 33 0.12
01_03_0057 + 12100613-12100817,12101216-12101247 31 0.63
08_02_0329 - 15833124-15833825 29 1.9
12_01_0655 + 5546293-5546478,5546760-5546877,5550697-5550776,555... 29 2.6
03_01_0528 + 3966687-3967643 29 2.6
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 2.6
01_06_1641 - 38845676-38845693,38846309-38846505,38846800-388472... 29 2.6
11_02_0069 - 8002358-8003407,8003563-8003678,8003770-8003809,800... 29 3.4
05_03_0435 - 14000891-14001379,14001429-14001563 29 3.4
04_04_0440 - 25219961-25221529 29 3.4
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 4.5
04_01_0352 - 4619946-4619984,4620062-4620133,4621515-4621880,462... 28 4.5
01_05_0490 + 22672241-22674679 28 4.5
10_08_0427 + 17828007-17828570,17829788-17829904,17830319-178303... 28 5.9
04_04_0754 + 27803143-27803517,27805441-27806832,27806910-278071... 28 5.9
01_06_1487 - 37715421-37715942 28 5.9
06_03_0350 - 19799138-19799211,19799808-19800174 27 7.8
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626... 27 7.8
04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800 27 7.8
03_05_0941 + 29008322-29009686,29009929-29010012,29010889-290110... 27 7.8
03_02_0004 - 4869853-4871106 27 7.8
01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942 27 7.8
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 176 bits (428), Expect = 1e-44
Identities = 85/136 (62%), Positives = 104/136 (76%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
KVR LREAFYRQNLPN+ NL+AT+ VF IVIYFQGFRV LP++S RGQ SYPIKLFY
Sbjct: 239 KVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFY 298
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSN+PIIL SAL++NLY ISQ+L ++SGNFLVNLLG W + G + PVGGL YY+
Sbjct: 299 TSNMPIILHSALITNLYFISQLLYRRYSGNFLVNLLGKWKESEYSG--HSVPVGGLAYYV 356
Query: 362 SPPESLSHIRSXGPHS 409
+ P SL+ + + H+
Sbjct: 357 TAPSSLADVLANPFHA 372
Score = 81.0 bits (191), Expect = 6e-16
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = +3
Query: 423 YIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSM 560
Y+ FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++
Sbjct: 375 YVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNL 420
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 176 bits (428), Expect = 1e-44
Identities = 85/136 (62%), Positives = 104/136 (76%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
KVR LREAFYRQNLPN+ NL+AT+ VF IVIYFQGFRV LP++S RGQ SYPIKLFY
Sbjct: 239 KVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFY 298
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSN+PIIL SAL++NLY ISQ+L ++SGNFLVNLLG W + G + PVGGL YY+
Sbjct: 299 TSNMPIILHSALITNLYFISQLLYRRYSGNFLVNLLGKWKESEYSG--HSVPVGGLAYYV 356
Query: 362 SPPESLSHIRSXGPHS 409
+ P SL+ + + H+
Sbjct: 357 TAPSSLADVLANPFHA 372
Score = 81.0 bits (191), Expect = 6e-16
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = +3
Query: 423 YIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSM 560
Y+ FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++
Sbjct: 375 YVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNL 420
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 175 bits (426), Expect = 2e-44
Identities = 84/136 (61%), Positives = 104/136 (76%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
KVR LREAFYRQNLPN+ NL+AT+ VF IVIYFQGFRV LP++S RGQ SYPIKLFY
Sbjct: 229 KVRALREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFY 288
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TSN+PIIL SAL++NLY ISQ+L ++SGNFLVNL+G W + G + PVGGL YY+
Sbjct: 289 TSNMPIILHSALITNLYFISQLLYRRYSGNFLVNLIGKWKESEYSG--HSVPVGGLAYYV 346
Query: 362 SPPESLSHIRSXGPHS 409
+ P SL+ + + H+
Sbjct: 347 TAPSSLADVLANPFHA 362
Score = 81.0 bits (191), Expect = 6e-16
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = +3
Query: 423 YIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRGHRDNSM 560
Y+ FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM GHR++++
Sbjct: 365 YVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNL 410
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 99.5 bits (237), Expect = 2e-21
Identities = 54/136 (39%), Positives = 80/136 (58%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K+ + +AFYRQNLPN++N +AT + I+FQGF + LP+++ R Y IKL +
Sbjct: 223 KLSAMSKAFYRQNLPNIINFLATCLFVPLAIFFQGFYIVLPVRTRRNFQAYCH--IKLSH 280
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
P++L L+ YV S++L K+SGN LVNLLG W + G ++ PVGG+ YYL
Sbjct: 281 FLYGPVVLHRLLLPLPYVASKVLYKKYSGNTLVNLLGKWDGLNHFG--QSIPVGGIVYYL 338
Query: 362 SPPESLSHIRSXGPHS 409
P L+ + H+
Sbjct: 339 RTPPILADLHRDPFHA 354
>09_04_0707 + 19645471-19646112
Length = 213
Score = 98.3 bits (234), Expect = 4e-21
Identities = 50/111 (45%), Positives = 68/111 (61%)
Frame = +2
Query: 53 MNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLY 232
M L+AT V ++ +GFRV LP++S RG+ + PIKL YTS +P++L SA VS+LY
Sbjct: 1 MGLLATCVVLLATVFLEGFRVMLPLRSRDARGRQLALPIKLLYTSTMPVVLHSAAVSSLY 60
Query: 233 VISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYLSPPESLSH 385
+SQ+L F +LLG W G A PVGG+ YY++PP LSH
Sbjct: 61 TVSQLL---HYSRFAGSLLGTWKKTGYA--AIPVPVGGVAYYVTPPAGLSH 106
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 303 TWGAAAPRA-PIPSGGSAT-TCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWID 476
TW A P+P GG A PP S +Y +L SC FS W++
Sbjct: 78 TWKKTGYAAIPVPVGGVAYYVTPPAGLSHA----------AAYAASLLASCTLFSGAWVE 127
Query: 477 VSGSSAKDVAKQLKEQQMVMRGHRD 551
VS SSA+DVA+QL Q++ + G R+
Sbjct: 128 VSRSSAQDVARQLSVQRLALHGARE 152
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 88.6 bits (210), Expect = 3e-18
Identities = 50/126 (39%), Positives = 66/126 (52%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
K L R +LPNL N + T +F + + + +S RG PIKL Y
Sbjct: 243 KAGALLFTLLRLDLPNLSNYMTTCVMFVLAVRLDETHLRRLYRSRPRRGTDEFVPIKLLY 302
Query: 182 TSNIPIILQSALVSNLYVISQMLAVKFSGNFLVNLLGVWADVGGGGPARAYPVGGLCYYL 361
TS +PI+L ++ VS V+ + G F+VNLLG W D GGG AYPVGGL YY+
Sbjct: 303 TSAMPIMLHASAVSAFCVLHLHSSGGGGGGFVVNLLGRWKDAGGGA---AYPVGGLVYYV 359
Query: 362 SPPESL 379
+PP L
Sbjct: 360 TPPSKL 365
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +3
Query: 306 WGAAAPRAPIPSGGSATTCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSG 485
W A A P GG P PS+ I + F++ SC S W + S
Sbjct: 341 WKDAGGGAAYPVGGLVYYVTP--PSKLLVDPGLIHELLIHSVFVVASCTLLSMAWAEASR 398
Query: 486 SSAKD 500
SSA++
Sbjct: 399 SSARE 403
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 70.5 bits (165), Expect = 8e-13
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 KVRGLREAFYRQ----NLPNLMNLIATIFVFAIVIYFQGFRVDLPIK--SARYRGQYSSY 163
K+ +REAF+R +LP+L L AT VF +Y QG RV LP++ +A + +Y
Sbjct: 238 KLSAVREAFFRGGGGGSLPDLRGLAATCAVFLAAVYLQGVRVALPVRPRNAPRSHRGGAY 297
Query: 164 PIKLFYTSNIPIILQSALVSNLYVISQML 250
++L YTS +P++L S+ VS+LYV+SQ L
Sbjct: 298 SVRLLYTSGMPVVLLSSAVSSLYVVSQAL 326
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +2
Query: 158 SYPIKLFYTSNIPIILQSALVSNLYV-ISQMLAVKFSG-NFLVNLLGVWADVGGGGPARA 331
+YP + + +L ++ + ++ + ML++K+ N +VN+LG+W ++ P
Sbjct: 93 AYPWMMMLATLAFFLLVLIILGDHHITLPPMLSIKYGETNKVVNMLGIWKEM-RQYPGHY 151
Query: 332 YPVGGLCYYLSPP 370
+PV G+ Y++ P
Sbjct: 152 WPVSGIASYITTP 164
>01_03_0057 + 12100613-12100817,12101216-12101247
Length = 78
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 557 RVVAMSAHHHLLLFQLLRNILSGGSGDIDPGLREERAG 444
R+ HHHLLL LL + + G G + +E +G
Sbjct: 3 RIGVTKLHHHLLLLVLLLVVAAAGGGSVQAAEEDEMSG 40
>08_02_0329 - 15833124-15833825
Length = 233
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 315 AAPRAPIPSGGSATTCPPRSPSRTFGQXDPIPT 413
A P AP SGG A PP P P PT
Sbjct: 174 APPLAPAGSGGQAAAAPPLPPLPVLAAGPPPPT 206
>12_01_0655 +
5546293-5546478,5546760-5546877,5550697-5550776,
5551329-5552345,5552523-5553344,5553528-5553800
Length = 831
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 391 PNVREGLRGG--QVVAEPPDGIGARGAAAPHVRPHTQQVHQEVTAELYCQ 248
P++ G GG QV E P +GA AA HV+ QV VT+E+ Q
Sbjct: 165 PSIGGGCTGGSCQVFGEMPSWLGAGAGAALHVQ--VSQVLYPVTSEVLHQ 212
>03_01_0528 + 3966687-3967643
Length = 318
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 339 SGGSATTCPPRSPSRTFGQXDPIPTR--CSYIFFMLGSCA 452
S S T PPR+P+R P+PT CS + +GS A
Sbjct: 144 SSSSPTKPPPRTPTRANPPPPPLPTSSPCSTVTNSVGSAA 183
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 343 PDGIGARGAAAPHVRP-HTQQVHQEVTAELY 254
PDGIG + A +P +RP + ++QE +A Y
Sbjct: 1570 PDGIGLQKAKSPSIRPSNDDSINQESSASEY 1600
>01_06_1641 -
38845676-38845693,38846309-38846505,38846800-38847265,
38847351-38847536
Length = 288
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 248 LAVKFSGNFLV---NLLGVWADVGGGGPARAYPVGGLCYYLSPPE 373
+AV FS N + + + WA G G AR Y +GG L PP+
Sbjct: 89 IAVGFSPNGKMVGGSAVAGWATPGAAGTARQYYLGGTTSSLCPPD 133
>11_02_0069 -
8002358-8003407,8003563-8003678,8003770-8003809,
8003967-8004005
Length = 414
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 488 GSGDIDPGLREERAGAEHEEDVGAAR 411
G GD D LR + G +HE +V A R
Sbjct: 86 GDGDGDSALRGNQCGQQHEHEVSAIR 111
>05_03_0435 - 14000891-14001379,14001429-14001563
Length = 207
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 497 LSGGSGDIDPGLREERAGAEHEEDVGAARGNGV 399
L+GGS D+D G R+ R G G R +G+
Sbjct: 114 LAGGSADVDGGTRQGRGGQLEAARGGRRRSSGL 146
>04_04_0440 - 25219961-25221529
Length = 522
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 352 AEPPDGIGARGAAAPHVRPHTQQVHQEVTAELY 254
A P G GAR AA P R HTQ + E+ + ++
Sbjct: 17 APPTAGGGARFAAPPPERDHTQDLPDEILSLVF 49
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 376 GLRGGQVVAEPPDGIGARGAAAPHVRPHTQQVHQEVTA 263
G RGG V A+P G G A AP P +++ E A
Sbjct: 121 GGRGGNVWAQPGRGRGGAPAPAPAPAPAARRIQDEGAA 158
>04_01_0352 -
4619946-4619984,4620062-4620133,4621515-4621880,
4622240-4622713
Length = 316
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 294 CGRTWGAAAPRAPIPSGGS 350
C T GAAA R P+PSG S
Sbjct: 86 CSSTAGAAARRLPLPSGAS 104
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 100 PGLPRRPSYQVCTLPRPVLIISDQVVLHFKYTNHSAVSACFQP 228
P PRR S V +LPR + ++ VV KY S+ A F P
Sbjct: 468 PARPRRRSRSVESLPRTEELEAEIVVEEIKYPLPSSSPAMFPP 510
>10_08_0427 +
17828007-17828570,17829788-17829904,17830319-17830384,
17831466-17831572,17831939-17832017,17832861-17833574,
17834040-17834148,17834263-17834429,17834876-17834950,
17835025-17835117,17835202-17835294
Length = 727
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 312 AAAPRAPIPSGG-SATTCPPRSPSRTFGQX-DPIPTRCS 422
+ APRAP+P+G S++ C S S + + DP P S
Sbjct: 6 STAPRAPLPAGAVSSSCCSSSSSSASMSRRWDPSPNPSS 44
>04_04_0754 +
27803143-27803517,27805441-27806832,27806910-27807164,
27807246-27807368,27807643-27808119,27808217-27808603
Length = 1002
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 491 GGSGDIDPGLREERAGAEHEEDVGAARGNGVXLTECA 381
GG G D L GAE EE V +G+ CA
Sbjct: 54 GGGGGGDGDLEAAAVGAEEEEKVAVFEVSGMTCAACA 90
>01_06_1487 - 37715421-37715942
Length = 173
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 509 LRNILSGGSGDIDPGLREERAGAEHEEDVGAARGNGVXLTECARGTPGGT 360
+ +L+GG G ++ + ER G + GAARG V + +R P G+
Sbjct: 102 MAKVLTGG-GCLEAAAKAERLGPSAAAESGAARGGPVAMV--SRDGPAGS 148
>06_03_0350 - 19799138-19799211,19799808-19800174
Length = 146
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 296 WA-DVGGGGPARAYPVGGLCYYLSPPESLSH 385
WA GG RA GG CY PP+ L+H
Sbjct: 59 WACGPAGGADCRAIQQGGACY--DPPDLLAH 87
>04_03_1020 -
21761297-21761555,21761630-21761739,21762402-21762635,
21762710-21762817,21762910-21762969,21763549-21763624,
21763710-21763870,21764485-21764547,21764657-21764744,
21765062-21765592,21766344-21766783
Length = 709
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 309 GAAAPRAPIPSGGSATTCPPRSPSRTFGQXDPI-PTRC 419
G +P P+P TC P PS T P+ PT C
Sbjct: 260 GLKSPPHPLPLPPGPATCSPLPPSPTAYSPHPLGPTTC 297
>04_03_0986 + 21456241-21456852,21456937-21457110,21457216-21457800
Length = 456
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 321 PRAPIPSGGSATTCPPRSPSRT 386
P A P+ SA + PPR+P RT
Sbjct: 66 PTAGAPANASALSAPPRAPVRT 87
>03_05_0941 +
29008322-29009686,29009929-29010012,29010889-29011052,
29011208-29011233,29011494-29011583,29012135-29012229,
29012328-29012495
Length = 663
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 556 ELSRCPRITICCSFNCFATSLAEDPETSIQVLEKNAQEPSM 434
+L++CP+ C F + LA P +V + + +PSM
Sbjct: 14 DLAKCPKNLCCLLFRVVSKFLALSPSLLKEVEKDDGDQPSM 54
>03_02_0004 - 4869853-4871106
Length = 417
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 312 AAAPRAPIPSGGSATTCPPRSPSRTFGQXDPIPTR 416
AAA A +GG+A C +P +T+ + +PT+
Sbjct: 25 AAAAAAAAAAGGAAGRCTTSTPLKTYAKCIALPTQ 59
>01_01_0332 - 2687623-2688032,2688195-2689921,2690017-2690942
Length = 1020
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +3
Query: 225 TSTSYLRCWQ*SSAVTSW*TCWVCGRTWGAAAPRAPIPSGGSATTCPPRSPSRTF 389
+S+S L W S++ W C W +PS T PP + TF
Sbjct: 40 SSSSALASWNTSASFCGWEGV-TCSHRWPTRVAALDLPSSNLTGTLPPAVGNLTF 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,695,246
Number of Sequences: 37544
Number of extensions: 345388
Number of successful extensions: 1632
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -