Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E06
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38) 32 0.37
SB_18721| Best HMM Match : CUB (HMM E-Value=0) 31 0.49
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022) 30 1.1
SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64) 29 3.5
SB_29392| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_47801| Best HMM Match : An_peroxidase (HMM E-Value=0) 28 4.6
SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_976| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 142 bits (343), Expect = 2e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 2 KVRGLREAFYRQNLPNLMNLIATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 181
KVRGLREAFYRQNLPNL NLIATIFVF IVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY
Sbjct: 929 KVRGLREAFYRQNLPNLTNLIATIFVFGIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFY 988
Query: 182 TSNIPIILQSA 214
TSNIPIILQ A
Sbjct: 989 TSNIPIILQVA 999
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 501 VAKQLKEQQMVMRGHRDNSMI 563
VAKQLK+QQMVMRGHRD SM+
Sbjct: 998 VAKQLKDQQMVMRGHRDKSMV 1018
>SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38)
Length = 525
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 128 KSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 226
KS RY Y+ YP+ + SN P+ L+ A+ SN
Sbjct: 131 KSERYESAYNKYPV--YIRSNYPVYLEVAVTSN 161
>SB_18721| Best HMM Match : CUB (HMM E-Value=0)
Length = 288
Score = 31.5 bits (68), Expect = 0.49
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 100 PGLPR-RPSYQVCTLPRPVLIISDQVVLHFKYTNHSAVSACFQPLRHISDAGSKVQ 264
P PR P+ CT R L +V LHF + N AC + + DA S VQ
Sbjct: 71 PNYPRDMPNIGTCTW-RITLAPGSRVALHFSFLNLELSDACAKDSLEVLDARSSVQ 125
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 30.7 bits (66), Expect = 0.86
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 321 PRAPIPSGGSATTCPPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTW 470
PR P P + PP P++T+ P PTR + + CA FSK W
Sbjct: 633 PRTPPPVQQAERRSPPIRPAQTY--TSPEPTRQDFTSPIAVQCA-FSKQW 679
>SB_17878| Best HMM Match : Drf_FH1 (HMM E-Value=0.022)
Length = 664
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 300 RTWGAAAPRAPIPSGGSATTCPPRSPSR-TFGQXDPIPTRCS 422
R A P P+P+ G+ TT P PSR T G PI + S
Sbjct: 465 RQGAVAPPLPPLPTQGAVTTPLPPLPSRSTIGPLPPITSSAS 506
>SB_21717| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.64)
Length = 499
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 89 VIYFQGFRVDLPIKSARY---RGQYSSYPIKLFYTSNIPIIL 205
V+ F F D +KS G+YS +P ++ T N+P IL
Sbjct: 266 VVVFDNFLPDTLVKSLELTINEGEYSDFPPEIGSTDNVPWIL 307
>SB_29392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 26 FYRQNLPNLMNLIATIFVFAIVIYF--QGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPI 199
FYR LP+++++++ IF + YF +RV LP G ++ I+ FY +P
Sbjct: 26 FYRVFLPDVLDVLSGIFTRCFIGYFYPMFYRVFLP---DILSGIFTRCFIRYFYPMFLPD 82
Query: 200 ILQSALVSNLY 232
+L L Y
Sbjct: 83 VLSGNLPDIYY 93
>SB_47801| Best HMM Match : An_peroxidase (HMM E-Value=0)
Length = 1263
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +3
Query: 363 PPRSPSRTFGQXDPIPTRCSYIFFMLGSCAFFSKTWIDVSGSSAKDV 503
PP++P F Q DP C F L F TW DV D+
Sbjct: 119 PPKAPDCLFDQYDPNRKVC---FTSLDMLYFLRVTWADVDNDGDVDL 162
>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 25 LLQAEPAKPHEP-HRYHFRLCYSHIFPGLP 111
LLQ KP P HRY +R+C + + G P
Sbjct: 442 LLQKAVKKPEGPKHRYFWRICCTTLLQGYP 471
>SB_976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 488 GSGDIDPGLREERAGAEHEEDVGAARG 408
G G+ D G + GA +++DVGAA G
Sbjct: 210 GGGNDDDGANNDDDGANNDDDVGAAIG 236
>SB_41600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 315 AAPRAPIPSGGSATTCPPRSPSRTFGQXDPIPTR 416
+AP PIP A T PP SP+ T P PTR
Sbjct: 338 SAPLPPIPRTRPAMTPPPISPT-TGPPKSPAPTR 370
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,621,564
Number of Sequences: 59808
Number of extensions: 333832
Number of successful extensions: 1022
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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