Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E06
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   3.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.5  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 132 LHVTEASTHHIRSSCSTLQIYQSFCSQ 212
           + V+  ST  + + C+TL+   S CSQ
Sbjct: 341 ISVSYPSTETLNTKCNTLERTPSKCSQ 367


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/29 (24%), Positives = 19/29 (65%)
 Frame = +3

Query: 441 GSCAFFSKTWIDVSGSSAKDVAKQLKEQQ 527
           G+C+   + + +V+ +  KD+ K++ E++
Sbjct: 417 GACSDVEQNFYEVARNKKKDLLKEILERE 445


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 312 AAAPRAPIPS--GGSATTCPPRSPSRTFGQXDP 404
           AAA  +  PS  GG +++  P SPS  F    P
Sbjct: 73  AAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSP 105


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 511  CFATSLAEDPETSIQVLEKNAQEPSM 434
            C  + +   PET +   EK  Q+P M
Sbjct: 1242 CIGSQIMVSPETLLSYDEKMDQKPKM 1267


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 186 QIYQSFCSQRLFPTSTSYLRC 248
           QI Q+F  + L P  + +L+C
Sbjct: 395 QIRQAFAEETLQPGPSMFLKC 415


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 221 SNLYVISQMLAVKFSGNFLVNLLGVWA 301
           + L +++Q+   K+ GN +VN +  +A
Sbjct: 313 TTLNMLTQVECYKYYGNIMVNAMCAYA 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,278
Number of Sequences: 438
Number of extensions: 3058
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)