Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E05
         (267 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09CY6 Cluster: HYR domain protein; n=1; Stigmatella au...    31   3.8  
UniRef50_Q0VS50 Cluster: Phosphotransferase system, nitrogen reg...    31   6.7  
UniRef50_Q1DYN8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q7RG63 Cluster: Putative uncharacterized protein PY0448...    30   8.8  
UniRef50_Q4YR48 Cluster: Putative uncharacterized protein; n=2; ...    30   8.8  

>UniRef50_Q09CY6 Cluster: HYR domain protein; n=1; Stigmatella
           aurantiaca DW4/3-1|Rep: HYR domain protein - Stigmatella
           aurantiaca DW4/3-1
          Length = 1710

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -1

Query: 138 NSGDIIKIDYSLHKHHNRYYAFLILADSAAGDPSLTPPGGV 16
           ++G +IK+D    KH  RY++ L+  +     PS++PPG V
Sbjct: 76  STGFVIKVDSRTGKHVARYHSVLV-RNWDNSSPSVSPPGNV 115


>UniRef50_Q0VS50 Cluster: Phosphotransferase system, nitrogen
           regulatory IIA protein; n=2; Oceanospirillales|Rep:
           Phosphotransferase system, nitrogen regulatory IIA
           protein - Alcanivorax borkumensis (strain SK2 / ATCC
           700651 / DSM 11573)
          Length = 157

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 19  STG-GRQTRIPRCRIGKDQESVVSIMVLM*TIVDFDDITG 135
           STG G    IP CR+G  Q++ V +++ + T +DFD + G
Sbjct: 56  STGIGEGIAIPHCRLGHCQQA-VGLLLKLETPIDFDAVDG 94


>UniRef50_Q1DYN8 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 225

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 102 HKHHNRYYAFLILADSAAGDPSLTPPGGV 16
           H HH+R  +   ++ + +GD  LT PGGV
Sbjct: 117 HHHHHRLPSQATISGTQSGDTDLTSPGGV 145


>UniRef50_Q7RG63 Cluster: Putative uncharacterized protein PY04486;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY04486 - Plasmodium yoelii
           yoelii
          Length = 444

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 253 GINFNCFIYYYDKNKGFPLLYLDV 182
           GI  N F  YY  NK  PL Y+D+
Sbjct: 88  GIETNLFKKYYSLNKNVPLFYIDI 111


>UniRef50_Q4YR48 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 110

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = -1

Query: 252 ELISTVLYTIMIRIKDSLYSI*TSERLSSIRIM--TRMY*N---SGDIIKIDYSLHKHH 91
           E +ST+ +TI +      YS   S+ LSS   +   R+Y N   SG+ IKI Y ++  H
Sbjct: 33  ENLSTITHTIEVNCSSEKYSNILSKCLSSDESLKQNRLYKNINVSGETIKIRYKIYTSH 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,348,347
Number of Sequences: 1657284
Number of extensions: 4164011
Number of successful extensions: 8581
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8581
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)