Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E05
         (267 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048120-1|AAH48120.3|  652|Homo sapiens chromosome 12 open read...    27   8.1  
BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open readi...    27   8.1  
AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens ...    27   8.1  
AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.              27   8.1  

>BC048120-1|AAH48120.3|  652|Homo sapiens chromosome 12 open reading
           frame 40 protein.
          Length = 652

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = -1

Query: 216 RIKDS-LYSI*TSERLSSIRIMTRMY*NSGD-IIKIDYSLHKHHNRYYAFLI 67
           +I+DS   +I T E++++  +  RM   SGD I+K D  +HK +  +Y F +
Sbjct: 509 QIEDSNRMTIKTKEKMNNFYV-ERMAKLSGDRIVKNDDKIHKQNENFYQFSV 559


>BC017959-1|AAH17959.1|  291|Homo sapiens chromosome 2 open reading
           frame 47 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 20  PPGGVKLGSPAAESARIKKA*YLLWCLCRL 109
           P G V+L +PA    R+  A    +C CRL
Sbjct: 18  PCGAVRLRTPAVAEVRLPSATLCYFCRCRL 47


>AK026208-1|BAB15393.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22555 fis, clone HSI01193. ).
          Length = 291

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 20  PPGGVKLGSPAAESARIKKA*YLLWCLCRL 109
           P G V+L +PA    R+  A    +C CRL
Sbjct: 18  PCGAVRLRTPAVAEVRLPSATLCYFCRCRL 47


>AC097717-3|AAY24163.1|  291|Homo sapiens unknown protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 20  PPGGVKLGSPAAESARIKKA*YLLWCLCRL 109
           P G V+L +PA    R+  A    +C CRL
Sbjct: 18  PCGAVRLRTPAVAEVRLPSATLCYFCRCRL 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,592,380
Number of Sequences: 237096
Number of extensions: 580018
Number of successful extensions: 886
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)