Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E04
         (431 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...   106   8e-24
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...   106   8e-24
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    31   0.27 
Z79756-3|CAB02121.1|  527|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U42439-4|AAA83508.1|  582|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z74038-8|CAD21642.1|  540|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z72507-16|CAC35887.1|  540|Caenorhabditis elegans Hypothetical p...    27   7.7  

>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score =  106 bits (254), Expect = 8e-24
 Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   TGCFNKVYDEGLYVCIVCKQDLFSSKNKYDSGCGWPAFNDVLARE-KVTLHKDTSAGLVR 178
           TG FN  +++G YVC+ C  +LF+S  K+ +GCGWPAF++ + ++  +    D S G+ R
Sbjct: 45  TGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPAFSESVGQDANIVRIVDRSHGMHR 104

Query: 179 TEVRCSKCSAHLGHVFDDGPTPTR-KRFCINSASLDFIPAEERKD 310
           TEVRC  C AHLGHVF+DGP  T  +R+CINS  + F    E+KD
Sbjct: 105 TEVRCKTCDAHLGHVFNDGPKETTGERYCINSVCMAF----EKKD 145


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score =  106 bits (254), Expect = 8e-24
 Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   TGCFNKVYDEGLYVCIVCKQDLFSSKNKYDSGCGWPAFNDVLARE-KVTLHKDTSAGLVR 178
           TG FN  +++G YVC+ C  +LF+S  K+ +GCGWPAF++ + ++  +    D S G+ R
Sbjct: 52  TGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPAFSESVGQDANIVRIVDRSHGMHR 111

Query: 179 TEVRCSKCSAHLGHVFDDGPTPTR-KRFCINSASLDFIPAEERKD 310
           TEVRC  C AHLGHVF+DGP  T  +R+CINS  + F    E+KD
Sbjct: 112 TEVRCKTCDAHLGHVFNDGPKETTGERYCINSVCMAF----EKKD 152


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 31.5 bits (68), Expect = 0.27
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 234 PSSNTCPR*AEHLEHRTSVRTKPALVSLCKVTFSLARTSLKAGH 103
           P+ N CP+ AE+L+   + +  P  +  C ++ +  R S + GH
Sbjct: 645 PTFNDCPKGAEYLDGFNAPKCLPPAIDSCPMSHNKCRYSSRFGH 688


>Z79756-3|CAB02121.1|  527|Caenorhabditis elegans Hypothetical
           protein F53C11.4 protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 92  SGCGWPAFNDVLAREKVTLHKDTSAGLVRTE 184
           S CG P FN VL R    L  D   GL ++E
Sbjct: 273 SACGSPTFNGVLQRVPQVLAVDAIIGLDKSE 303


>U42439-4|AAA83508.1|  582|Caenorhabditis elegans Hypothetical
           protein F19C7.2 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 338 FYKFMHFRLCLSFLQQE*SPRKQNLYKNVFGW 243
           F K  HF LC +F + + S   Q  ++NV+G+
Sbjct: 301 FKKIRHFSLCDNFDETKLSKSVQFFFQNVYGY 332


>Z74038-8|CAD21642.1|  540|Caenorhabditis elegans Hypothetical
           protein F17C11.12 protein.
          Length = 540

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 179 FAPNL-HLYLYVK*PFPLLEHH*KLAIHIQSHIYF 78
           FAP++ HL LY    FP+L +   LAI +   I+F
Sbjct: 473 FAPHVFHLNLYTGIDFPVLPYAILLAIGLADFIFF 507


>Z72507-16|CAC35887.1|  540|Caenorhabditis elegans Hypothetical
           protein F17C11.12 protein.
          Length = 540

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 179 FAPNL-HLYLYVK*PFPLLEHH*KLAIHIQSHIYF 78
           FAP++ HL LY    FP+L +   LAI +   I+F
Sbjct: 473 FAPHVFHLNLYTGIDFPVLPYAILLAIGLADFIFF 507


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,987,678
Number of Sequences: 27780
Number of extensions: 247215
Number of successful extensions: 589
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)