Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_E03
(561 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 87 2e-18
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 76 4e-15
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 68 8e-13
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 1.4
SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|... 27 2.5
SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr... 27 2.5
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 27 2.5
SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|... 27 2.5
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 27 2.5
SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces... 26 3.3
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 25 7.6
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 7.6
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 86.6 bits (205), Expect = 2e-18
Identities = 45/129 (34%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Frame = +2
Query: 98 SKVDNGTALILTPYIEEG-RIKEARRASLVNPNLFLGIESYSGFFTVNKTYNSNMFFWYF 274
S+ +NG + L + + R+K+++ SL ++ Y+G+ V + ++FFW+F
Sbjct: 553 SQEENGEHVNLKAFPDHTLRVKDSKPESLGIDT----VKQYTGYLDVED--DRHLFFWFF 606
Query: 275 PVFDKPVNETPWIIWLQGGPGASSLTGVFDELGPFKV-VYSDRLKRNPYTWAQNHSLLFI 451
+ P N+ P ++WL GGPG SSLTG+F ELGP + + + + + NP++W N S++F+
Sbjct: 607 ESRNDPEND-PVVLWLNGGPGCSSLTGLFMELGPSSINIETLKPEYNPHSWNSNASVIFL 665
Query: 452 DNPVGTGYS 478
D P+ TG+S
Sbjct: 666 DQPINTGFS 674
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 75.8 bits (178), Expect = 4e-15
Identities = 35/90 (38%), Positives = 53/90 (58%)
Frame = +2
Query: 215 YSGFFTVNKTYNSNMFFWYFPVFDKPVNETPWIIWLQGGPGASSLTGVFDELGPFKVVYS 394
++G + ++FFW F KP E I+WL GGPG SS G E+GPF++ +
Sbjct: 46 HAGHLNQTDQLDGDLFFWMFESV-KPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDN 104
Query: 395 DRLKRNPYTWAQNHSLLFIDNPVGTGYSFN 484
+ + NP W + +LLF+D P+GTGYS++
Sbjct: 105 NTFQLNPGRWDELGNLLFVDQPLGTGYSYS 134
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 68.1 bits (159), Expect = 8e-13
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +2
Query: 209 ESYSGFFTVNKTYNSNMFFWYFPVFDKPVNETPWIIWLQGGPGASSLTGVFDELGPFKVV 388
E YSG+ N + ++F+ Y P V+ +I+WLQGGPG + G F E GP ++
Sbjct: 73 ELYSGYLEANS--DKSLFYTYAPAV---VDSETFIVWLQGGPGCAGTLGFFSENGPIEIS 127
Query: 389 YSD-RLKRNPYTWAQNHSLLFIDNPVGTGYS 478
S NP +W ++L++D P GTGYS
Sbjct: 128 QSSPSPSLNPESWTNFANMLWLDQPFGTGYS 158
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 263 FWYFPVFDKPVNETPWIIWLQG 328
FWYF V++ P TP +L+G
Sbjct: 435 FWYFTVYNSPTIYTPNFHYLEG 456
>SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|chr
3|||Manual
Length = 393
Score = 26.6 bits (56), Expect = 2.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 53 DNNIDSIKTVTCKPASKVDNGTALILTPYIEEGRIKEARRASLVNPNLFLGIES 214
DN ID K P + ++ L PY E +K+ ++ NPNLF ES
Sbjct: 20 DNEIDLEKG----PLPEYNSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDES 69
>SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 514
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = +2
Query: 125 ILTPYIEEGRIKEARRASLVNPNLFLGIESYSGFFTVNKTYNSNMFFWYFPVFDKPVNET 304
IL + + GR ++A + E+YS + + N + WY + + N T
Sbjct: 300 ILNRFFKTGRYEKADSTQVSPSGPISAKETYSPAMDILVSSNFERYLWYLALATEAPNHT 359
Query: 305 P 307
P
Sbjct: 360 P 360
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 14 KAVLQQETCVEIFDNNIDSIKTVTCKPASKVDNGTALILTPYIEEGRIKE 163
KA + CV+I+ + IDS+ T T K S + N + ++ EEG E
Sbjct: 113 KASCTLDGCVKIYTSRIDSVATETGKLLSGLANDSKVL--QQTEEGEDAE 160
>SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|chr
3|||Manual
Length = 368
Score = 26.6 bits (56), Expect = 2.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 53 DNNIDSIKTVTCKPASKVDNGTALILTPYIEEGRIKEARRASLVNPNLFLGIES 214
DN ID K P + ++ L PY E +K+ ++ NPNLF ES
Sbjct: 20 DNEIDLEKG----PLPEYNSEDGSTLPPYSENINLKDPKQMGANNPNLFNTDES 69
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 421 LGSESFSVVY*QPCWDGLQF*LTVAMDTPKIWRRTV 528
LG E F ++ WDG+ L +P+ W++ V
Sbjct: 230 LGLEPFRLIMNDSRWDGIPLVLETPAKSPEQWKKEV 265
>SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 3.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 344 SLTGVFDELGPFKVVYSDRLKRNPYTWAQNHSLLFIDN 457
S+T ++ L V D + +NP AQN+SL FI N
Sbjct: 220 SMTDYYETLPSLWNVTRDFIHQNPQYLAQNNSLDFIVN 257
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.0 bits (52), Expect = 7.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 151 SYKGGTACVFSQSKFV 198
SY+G C+F +SKF+
Sbjct: 118 SYRGSVVCLFKRSKFL 133
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 514 ISWVYPSRLSVKTVTRPNRVVNKQQRMILSPSV 416
+ W + L+V+TVT+ R N +Q ++ SV
Sbjct: 249 VDWKENADLTVRTVTKKQRNKNTKQTRVVKVSV 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,300,045
Number of Sequences: 5004
Number of extensions: 47723
Number of successful extensions: 122
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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