Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E03
         (561 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)               64   6e-11
SB_51094| Best HMM Match : VWA (HMM E-Value=0)                         27   7.9  

>SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)
          Length = 446

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +2

Query: 248 NSNMFFWYFPVFDKPVNET--PWIIWLQGGPGASSLT-GVFDELGPFKVVYSDRLKRNPY 418
           +++MF+W +    +P      P I+WLQGGPG SS   G F ELGP  V     LK    
Sbjct: 43  SAHMFWWLYGARGEPSERENKPLILWLQGGPGGSSTGYGNFMELGPLDV----NLKLRNT 98

Query: 419 TWAQNHSLLFIDNPVGTGYSF 481
           +W +  ++LF+DNPVG G+S+
Sbjct: 99  SWVEVANVLFVDNPVGAGFSY 119


>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
          Length = 3544

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
 Frame = +2

Query: 71   IKTVTCKPASKVDNGTALILTPYIEEGRIKEARRASLVNPNLFL-GIESYSGFFTVNKTY 247
            I T+T +      NGTA + + YI      EAR  +   P   +  ++     + V+ T 
Sbjct: 3067 ITTITTRGILDGPNGTAFVKSYYISYTNDTEARWYNYTEPVAKVPAVDQRPEKWDVDVTK 3126

Query: 248  NSNMFFWYFPVFDKPV--NETPWIIWLQGGPGAS 343
            +   + W  P+   P+    T   + L+ GPG S
Sbjct: 3127 DGESYVWIIPLALIPILMFTTAIPMLLRFGPGGS 3160


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,974,015
Number of Sequences: 59808
Number of extensions: 340232
Number of successful extensions: 895
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)