Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E02
         (633 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb...    54   2e-08
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    46   3e-06
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom...    34   0.020
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo...    28   0.97 
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|...    27   2.3  
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|...    27   3.0  
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1...    27   3.0  
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb...    26   3.9  
SPBC646.14c |orc5||origin recognition complex subunit Orc5|Schiz...    26   5.2  
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr...    26   5.2  
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr...    25   6.9  
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M...    25   6.9  

>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 510

 Score = 54.0 bits (124), Expect = 2e-08
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = +2

Query: 26  KQFLQIFPELRNAPLFIAGESYAGKYVPALGMEIHKHKNTSDIDINFEGLMIGNAYVDPE 205
           ++FL+ FPE  N   FIAGES+AG+Y+P +  ++ K KN     +N  GL IGN +++P 
Sbjct: 155 EKFLEEFPERANDEWFIAGESFAGQYIPHIAAKL-KEKNL----VNLGGLAIGNGWINP- 208

Query: 206 MISHIANVFYY 238
            +SH      Y
Sbjct: 209 -LSHYETYLNY 218


>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 46.4 bits (105), Expect = 3e-06
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
 Frame = +2

Query: 2   GSHLYTVLKQFLQIFPELRNAPLFIAGESYAGKYVPALGMEIHKHKNTSDI--------- 154
           G  +Y  L  F   FP+  +    IAGESYAG Y+P    EI +H   ++          
Sbjct: 687 GKDVYAFLNLFFAKFPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGANFFVASGYEME 746

Query: 155 --DINFEGLMIGNAYVDP 202
              IN + ++IGN   DP
Sbjct: 747 KQYINLKSVLIGNGLTDP 764


>SPAC1296.03c |sxa2||serine carboxypeptidase
           Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 33.9 bits (74), Expect = 0.020
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 10/115 (8%)
 Frame = +2

Query: 5   SHLYTVLKQFLQIFPELRNAPLFIAGESYAGKYVPALGMEIHKHKNTSDIDINFEGLMIG 184
           S     LK F Q FP L    L++ GESY   +       +    +   ++INF G+ I 
Sbjct: 173 SDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEAL---LSEPSLNINFMGVGIV 229

Query: 185 NA----YVDPEMIS------HIANVFYYFGLLGQEQANTLKPLVESFQNDIAANR 319
           +     Y   E I+      HI+ + YYF       +   K   +  Q D   NR
Sbjct: 230 SGLTADYETQEQITASIWVEHISKLGYYFNNTSSTISEEFKKRNKECQYDSVLNR 284


>SPAC22F3.12c |rgs1||regulator of G-protein signaling
           Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 28.3 bits (60), Expect = 0.97
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 203 EMISHIANVFYYFGLLGQEQA-NTLKPLVESFQNDIAANRSIEAKNKWVNLITILLV 370
           E  +H   ++  F       A N    L E   N +A    +E  N+W+ LI ILL+
Sbjct: 398 ESFAHACGIYNCFLSSNAPNAVNLPSDLYEKITNHMALAMEVEPLNEWLQLIHILLL 454


>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 405

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +2

Query: 413 LGVGEYSHFLNRAEVKRALHVGDIKFSFVNVTVNSRMA 526
           LGV    HF N +   R LHVGD   S  N    +R A
Sbjct: 343 LGVLCLQHFFNISHPSRCLHVGDQFLSAGNNDYKARAA 380


>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 997

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 431 SHFLNRAEVKRALHVGDIKFSFVNVTVNSRMAPDFLSSAKPLFE 562
           S  L  +EV +AL  GDI  +F   +  S    DF+S  + L E
Sbjct: 321 SRVLRNSEVSKALEPGDILIAFKTDSHKSTYIVDFVSLFEVLDE 364


>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
           complex subunit Tpr1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1039

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +2

Query: 194 VDPEMISHIANVFYYFGLLGQEQANTLK 277
           V PE++++IA + Y+ GL+ +   N +K
Sbjct: 473 VGPELLNNIAVLQYHLGLIPEAHGNIIK 500


>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 424

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 130 VYFHAQRWHIFPGVRFPGYKKWCVSQLR-EYLKKLLQ 23
           V    Q+    PG+++ GY ++C  QL  E +  LL+
Sbjct: 388 VMLEHQKQRCLPGIQYDGYARFCHEQLSPEKMANLLK 424


>SPBC646.14c |orc5||origin recognition complex subunit
           Orc5|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 455

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 395 NFLRDDLGVGEYSHFLNRAEVKRALHVGDIKFSFVNVTVNSRMAPDFLSSAKP 553
           NFL  D  V +  H +N  E+K  L    I  S V+  +   +   FL+S  P
Sbjct: 269 NFLVSDATVTKRLHIINPTEIKNLLDSKSINLSLVSKYL---LVSAFLASYNP 318


>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1516

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 8   HLYTVLKQFLQIF-PELRNAPLFIAGESYAGKYVPA 112
           HLY + +   +    E +N  + I+GES AGK V A
Sbjct: 142 HLYAIAEDSYKCMNQEHKNQTIIISGESGAGKTVSA 177


>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 1471

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 8   HLYTVLKQ-FLQIFPELRNAPLFIAGESYAGKYVPA 112
           HLY++    +  +  + +N  + ++GES AGK V A
Sbjct: 134 HLYSIASSCYHALTTDSKNQTIIVSGESGAGKTVAA 169


>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1115

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = +2

Query: 41  IFPELRNAPLFIAGESYAGKYV--PALGMEIHKHKNTSDIDINFEGLMIGNAYVDPEMIS 214
           +F + RN P  + G  +    V     G+ IHK KN SDI I     ++     + E+I 
Sbjct: 132 MFYQSRNNPEVVIGGYHQKLTVVNAERGISIHKDKNVSDIFIMRRNRLLCCGSTNGEIIL 191

Query: 215 HIANVF 232
              N F
Sbjct: 192 RDPNSF 197


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,606,176
Number of Sequences: 5004
Number of extensions: 53994
Number of successful extensions: 158
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)