Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E02
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -2

Query: 206 FPGQRKHCRSLVPRN*CRYQMCSYACVFP-C--PTLAH 102
           FP  +K CRS+V       Q C+ A  F  C  PT+ H
Sbjct: 532 FPVHKKGCRSIVSNYRGITQTCATAKTFELCIFPTILH 569


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 305 YRFGMILREV*-GYLPVLVPIDQNSRTRLRCEISFPG 198
           +R  M +R V   YLP ++ + +  +TRLR  +  PG
Sbjct: 327 HRMPMWIRSVFLHYLPAMLLMKRPRKTRLRWMMEMPG 363


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 120  WKYTSIRTHLISTLI 164
            W+Y ++RT +IST I
Sbjct: 1512 WRYNNMRTGVISTAI 1526


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,716
Number of Sequences: 2352
Number of extensions: 13001
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)