Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_E01
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   3.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   4.5  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   7.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.9  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   7.9  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   7.9  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   7.9  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRA-GKGKMRN 292
           R  +++   ++ L+VSD   E  K  ++ + + R       L VYKS+     G  K +N
Sbjct: 157 RQEVLQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKKKN 216

Query: 293 R 295
           +
Sbjct: 217 K 217


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 411 RRFSWFTLSISMQGMLRNARVR 346
           R+++   L I +  +LRN RVR
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVR 512


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 435 RCPPGASF 412
           RCPPG+ F
Sbjct: 60  RCPPGSKF 67


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +3

Query: 72  PPPWQRPGYR 101
           PPPW+   Y+
Sbjct: 125 PPPWETDSYK 134


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 379 DARDVAECTSQTLVLIIDDKG 317
           D+RD +  ++ +  +I+ DKG
Sbjct: 86  DSRDKSNTSNTSKTIILSDKG 106


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 435 RCPPGASF 412
           RCPPG+ F
Sbjct: 60  RCPPGSKF 67


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 116 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQ 259
           R  +++   ++ L+VSD   E  K  ++ + + R       L VYKS+
Sbjct: 125 RQEVLQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSK 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,828
Number of Sequences: 438
Number of extensions: 2107
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)