Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D22
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g18100.1 68418.m02125 superoxide dismutase [Cu-Zn] / copper/z... 159 1e-39
At1g08830.1 68414.m00983 superoxide dismutase [Cu-Zn] (SODCC) / ... 154 3e-38
At2g28190.1 68415.m03423 superoxide dismutase [Cu-Zn], chloropla... 150 7e-37
At1g12520.1 68414.m01449 superoxide dismutase copper chaperone, ... 62 3e-10
At1g10970.1 68414.m01259 metal transporter, putative (ZIP4) simi... 31 0.39
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 30 0.91
At4g38660.1 68417.m05473 thaumatin, putative similar to thaumati... 30 1.2
At3g54230.1 68416.m05994 zinc finger protein-related / D111/G-pa... 29 1.6
At3g11870.1 68416.m01455 protein kinase-related contains eukaryo... 29 1.6
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 2.1
At5g61350.1 68418.m07698 protein kinase family protein contains ... 28 4.9
At1g15780.1 68414.m01893 expressed protein 28 4.9
At4g24800.1 68417.m03552 MA3 domain-containing protein similar t... 27 6.4
At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zin... 27 6.4
At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zin... 27 6.4
At5g19740.1 68418.m02347 peptidase M28 family protein ileal pept... 27 8.5
At4g07670.1 68417.m01203 protease-associated (PA) domain-contain... 27 8.5
At1g60960.1 68414.m06862 metal transporter, putative (IRT3) iden... 27 8.5
>At5g18100.1 68418.m02125 superoxide dismutase [Cu-Zn] / copper/zinc
superoxide dismutase (CSD3) identical to copper/zinc
superoxide dismutase GI:3273755
Length = 164
Score = 159 bits (386), Expect = 1e-39
Identities = 73/148 (49%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Frame = +3
Query: 96 RAIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 272
RA+A + G+N +RG + F + G HV G I GL PG +GFH+H GD + GC STG H
Sbjct: 9 RAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPH 68
Query: 273 FNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERA 452
FNP N+ HG P++E RH GDLGN N ++I + D H+ ++G + ILGRAVV+H
Sbjct: 69 FNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADP 128
Query: 453 DDFGRTDHPDSRKTGNAGGRVACGVIGI 536
DD G+ H S+ TGNAG RV CG+IG+
Sbjct: 129 DDLGKGGHKLSKSTGNAGSRVGCGIIGL 156
>At1g08830.1 68414.m00983 superoxide dismutase [Cu-Zn] (SODCC) /
copper/zinc superoxide dismutase (CSD1) identical to
SWISS-PROT: P24704
Length = 152
Score = 154 bits (374), Expect = 3e-38
Identities = 70/139 (50%), Positives = 89/139 (64%)
Frame = +3
Query: 120 ENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHG 299
E + G I FT+ DG V G++ GL PG +GFHVH GD + GC STG HFNP+ K HG
Sbjct: 12 EGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHG 71
Query: 300 HPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADDFGRTDHP 479
P D NRH GDLGN + ++ + D + +TG + I+GRAVV+H DD G+ H
Sbjct: 72 APEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHE 131
Query: 480 DSRKTGNAGGRVACGVIGI 536
S TGNAGGRVACG+IG+
Sbjct: 132 LSLATGNAGGRVACGIIGL 150
>At2g28190.1 68415.m03423 superoxide dismutase [Cu-Zn], chloroplast
(SODCP) / copper/zinc superoxide dismutase (CSD2)
identical to GP:3273753:AF061519
Length = 216
Score = 150 bits (363), Expect = 7e-37
Identities = 71/152 (46%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Frame = +3
Query: 84 SQPTRAIAHLVG-ENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGS 260
S +A+A L G ++ G +T T+ G V I GL PG +GFH+HE GD + GC S
Sbjct: 62 SAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCIS 121
Query: 261 TGSHFNPENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVL 440
TG HFNP N HG P DE RH GDLGN + + ++ ++D + +TG + ++GRA V+
Sbjct: 122 TGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVV 181
Query: 441 HERADDFGRTDHPDSRKTGNAGGRVACGVIGI 536
HE DD G+ H S TGNAGGR+ACGVIG+
Sbjct: 182 HELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213
>At1g12520.1 68414.m01449 superoxide dismutase copper chaperone,
putative similar to copper chaperone for superoxide
dismutase [Homo sapiens] gi|2431868|gb|AAC51764
Length = 254
Score = 61.7 bits (143), Expect = 3e-10
Identities = 37/120 (30%), Positives = 61/120 (50%)
Frame = +3
Query: 99 AIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFN 278
A+A G +I G + F ++ +E + GL PG + + ++E GD++ G STGS +N
Sbjct: 98 AVAEFKGPDIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDLTNGAASTGSLYN 157
Query: 279 PENKEHGHPSDENRHVGDLGNAEFDKNYSSKIDMIDPHLAITGAHGILGRAVVLHERADD 458
P + G +GDLG E DKN + L + ++GRAVV+++ D+
Sbjct: 158 PFQDQTG-----TEPLGDLGTLEADKNGEAFYSGKKEKLKVA---DLIGRAVVVYKTDDN 209
>At1g10970.1 68414.m01259 metal transporter, putative (ZIP4) similar
to Zn and Cd transporter ZNT1 [Thlaspi caerulescens]
gi|7381054|gb|AAF61374; member of the Zinc (Zn2+)-Iron
(Fe2+) permease (ZIP) family, PMID:11500563
Length = 408
Score = 31.5 bits (68), Expect = 0.39
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 99 AIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFN 278
A+ +VGE + N F G +H IVG+ H H H + G C +H +
Sbjct: 182 AVVPVVGERVTDNKVFGEEDGGGIH----IVGI-RAHAAHHRHSHSNSHGTCDG-HAHGH 235
Query: 279 PENKEHGHPSDEN--RHV 326
HG+ EN RHV
Sbjct: 236 SHGHMHGNSDVENGARHV 253
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 30.3 bits (65), Expect = 0.91
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -3
Query: 553 REMFYSIPMTPQATRPPALPVFLESG---WSVRPKSSARSCRTTALPRI 416
R++ +++ T + PP LPV L SG WSV S+ S + R+
Sbjct: 34 RQLLHALQSTSSSPLPPLLPVELRSGDRRWSVAWSGSSSSSSAIEIARV 82
>At4g38660.1 68417.m05473 thaumatin, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, thaumatin-like protein precursor [Pyrus
pyrifolia] GI:3241854; contains Pfam profile PF00314:
Thaumatin family
Length = 345
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -3
Query: 208 WPG-----GSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARVGCE 83
WPG GSPT+ + + LP G+ ++ P +S W AR GC+
Sbjct: 43 WPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWSGRFW--ARTGCK 87
>At3g54230.1 68416.m05994 zinc finger protein-related / D111/G-patch
domain-containing protein / RNA recognition motif
(RRM)-containing protein KIAA0122 gene , Homo sapiens,
EMBL:HSDKG02; contains Pfam profiles PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF01585: G-patch domain, weak hit to PF00641: Zn-finger
in Ran binding protein and others
Length = 1105
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = +3
Query: 183 SIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNP-ENKEHGHPSDENRHVG-DLGNAEFDK 356
S G GHY H HE+ GC + N +K + H D+ R D +D
Sbjct: 124 SEAGSRNGHYRDHEHERSSRYDGCDDYSCNDNNYRSKNYHHSRDDGREKDYDYTRRSYDS 183
Query: 357 NY 362
Y
Sbjct: 184 EY 185
>At3g11870.1 68416.m01455 protein kinase-related contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 554
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 222 VHEKGDISGGCGSTGSHFNPENKEHGHPSDEN 317
V +K D SGG G N E+K PSD+N
Sbjct: 58 VEKKSDPSGGLGEENEKTNSESKVLSVPSDQN 89
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/102 (24%), Positives = 38/102 (37%)
Frame = -3
Query: 553 REMFYSIPMTPQATRPPALPVFLESGWSVRPKSSARSCRTTALPRIPCAPVMARCGXXXX 374
RE+ P++P ++P L + + SS+ S + RI APV+ R
Sbjct: 33 RELDLGSPVSPLRSQPRGLTT---TTTTTTTSSSSSSSSGSVTGRIKHAPVIGRSNSVRS 89
Query: 373 XXXXXXXSNSALPRSPTWRFSSLGWPCSLFSGLK*EPVEPQP 248
+N+ PRS + SS L S P P
Sbjct: 90 QSNSSSGNNNLRPRSDSATTSSSSHSQPLLSSSSSSATSPAP 131
>At5g61350.1 68418.m07698 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 842
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = -3
Query: 247 PDMSPFSWTW---NP*--WPGGSP--TIDPSTWTLPSGSRVNVILP 131
P + P S TW P +P GS T+DPST T P G +I P
Sbjct: 228 PKIDPLSRTWLSDKPYNTFPEGSRNVTVDPSTITYPDGGATALIAP 273
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -3
Query: 220 WNP*WPGGSPTIDPSTW--TLPSGSRVNVILPLM 125
W P P G P +D W LP SR ++ +M
Sbjct: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIM 39
>At4g24800.1 68417.m03552 MA3 domain-containing protein similar to
programmed cell death 4 protein [Gallus gallus]
GI:12958564; contains Pfam profile PF02847: MA3 domain
Length = 702
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 162 GKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVGD 332
GK + V H G + K D GG G+ G + + H P+D N G+
Sbjct: 44 GKASGASNAVKHRRSHAGRSIRSKKDGGGGKGNWGKLIDTDGDYHIDPNDPNYDSGE 100
>At2g46800.2 68415.m05840 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 204 GHYGFHVHEKGDISGGCGSTGSHFNPENKE---HGHPSDENRHVGDLGNAEFDKN 359
GH H H+ + S G T H + +++ HGH D++ GD+ DK+
Sbjct: 189 GHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQLLDKS 243
>At2g46800.1 68415.m05839 zinc transporter (ZAT) identical to zinc
transporter ZAT [Arabidopsis thaliana]
gi|4206640|gb|AAD11757; member of the cation diffusion
facilitator (CDF) family, or cation efflux (CE) family,
PMID:11500563
Length = 398
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +3
Query: 204 GHYGFHVHEKGDISGGCGSTGSHFNPENKE---HGHPSDENRHVGDLGNAEFDKN 359
GH H H+ + S G T H + +++ HGH D++ GD+ DK+
Sbjct: 189 GHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHAHGDVTEQLLDKS 243
>At5g19740.1 68418.m02347 peptidase M28 family protein ileal
peptidase I100 - Rattus norvegicus, EMBL:AF009921;
contains Pfam profiles PF04389: Peptidase family M28,
PF02225: PA domain
Length = 681
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 202 GGSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARV-GCER 80
GG S W PSG +V + + PT A V GCER
Sbjct: 206 GGDEWFPASKWMPPSGVQVGTVYNGLGDPTTPGWASVDGCER 247
>At4g07670.1 68417.m01203 protease-associated (PA) domain-containing
protein similar to PF02225: PA domain; similar to
N-acetylated-alpha-linked acidic dipeptidase II
(NAALADase II) (SP:Q9Y3Q) {Homo sapiens};similar to
Glutamate carboxypeptidase II (Membrane glutamate
carboxypeptidase) (mGCP) (N-acetylated-alpha-linked
acidic dipeptidase I) (NAALADase I)
(Pteroylpoly-gamma-glutamate
carboxypeptidase)(Folylpoly-gamma-glutamate
carboxypeptidase) (FGCP) (Folate hydrolase 1)
(Prostate-specific membrane antigen homolog) (SP|O77564)
{Sus scrofa}
Length = 280
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 202 GGSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARV-GCER 80
GG S W PSG +V + + PT A V GCER
Sbjct: 71 GGDEWFPASKWMPPSGFQVGTVYNGLGDPTTPGWASVDGCER 112
>At1g60960.1 68414.m06862 metal transporter, putative (IRT3)
identical to putative metal transporter IRT3
[Arabidopsis thaliana] gi|17385796|gb|AAL38438; similar
to iron-regulated transporter 1 [Lycopersicon
esculentum] gi|9716481|gb|AAF97509; member of the Zinc
(Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563
Length = 425
Score = 27.1 bits (57), Expect = 8.5
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 7/81 (8%)
Frame = +3
Query: 81 RSQPTRAIAHLVGENIRGNITFTRLPDGKVHVEGSIVGL-------PPGHYGFHVHEKGD 239
R Q + ++GE F G +H+ G PPGH H K D
Sbjct: 180 REQSPGIVVPMIGEGTNDGKVFGEEDSGGIHIVGIHAHAAHHRHSHPPGHDSCEGHSKID 239
Query: 240 ISGGCGSTGSHFNPENKEHGH 302
I G +H + HGH
Sbjct: 240 I----GHAHAHGHGHGHGHGH 256
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,705,407
Number of Sequences: 28952
Number of extensions: 284313
Number of successful extensions: 821
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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