Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D21
         (596 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g05760.1 68414.m00600 jacalin lectin family protein (RTM1) id...    33   0.14 
At2g36450.1 68415.m04474 AP2 domain-containing protein low simil...    30   1.3  
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ...    29   1.8  
At1g19350.5 68414.m02408 brassinosteroid signalling positive reg...    29   2.4  
At1g19350.4 68414.m02407 brassinosteroid signalling positive reg...    29   2.4  
At1g19350.3 68414.m02405 brassinosteroid signalling positive reg...    29   2.4  
At1g19350.1 68414.m02406 brassinosteroid signalling positive reg...    29   2.4  
At5g18260.1 68418.m02146 expressed protein                             28   5.4  
At3g24550.1 68416.m03083 protein kinase family protein contains ...    28   5.4  
At5g11990.1 68418.m01402 proline-rich family protein contains pr...    27   7.2  
At1g35660.1 68414.m04432 expressed protein                             27   7.2  
At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) famil...    27   9.5  
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i...    27   9.5  

>At1g05760.1 68414.m00600 jacalin lectin family protein (RTM1)
           identical to gi:6503088 (GB:AAF14583) from [Arabidopsis
           thaliana] (Proc. Natl. Acad. Sci. U.S.A. 97 (1), 489-494
           (2000)); contains Pfam profile PF01419 jacalin-like
           lectin domain
          Length = 174

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 121 EYYKFSKQARHPRDVTWDKNIGNGKVFGTLGQNDDGLFGKAGYTRQF 261
           EYYK+     H R + ++ N      FGT G ++D    K G + QF
Sbjct: 85  EYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQF 131


>At2g36450.1 68415.m04474 AP2 domain-containing protein low
           similarity to DREB1B GI:3738226 from [Arabidopsis
           thaliana]; contains Pfam profile PF00847: AP2 domain
          Length = 184

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 491 LSDPPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPA 321
           + +P    R++L  F TP   A  + +  + L  S+A   F    S+LP    +SPA
Sbjct: 31  IREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPA 87


>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
           family protein / PAN domain-containing protein contains
           Pfam profiles: PF01453 lectin (probable mannose
           binding), PF00024 PAN domain
          Length = 764

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -1

Query: 359 QSNLPPKFEVSPAGPKTLVPY---ACPSNLPRSSLKNCRVYPALPNNPS 222
           + N P    VS + PK LVPY    C S       KN  +Y   P N S
Sbjct: 307 ECNCPFNAFVSVSDPKCLVPYQKPGCKSGFNMVKFKNLELYGIYPANDS 355


>At1g19350.5 68414.m02408 brassinosteroid signalling positive
           regulator, putative similar to BZR1 protein [Arabidopsis
           thaliana] gi|20270971|gb|AAM18490
          Length = 335

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = -1

Query: 446 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 267
           H  +PL+  F  P +   +S ++ +F        P     P    T+ P+     +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162

Query: 266 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 171
           L   R+  + P  P    P+  N  PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194


>At1g19350.4 68414.m02407 brassinosteroid signalling positive
           regulator, putative similar to BZR1 protein [Arabidopsis
           thaliana] gi|20270971|gb|AAM18490
          Length = 335

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = -1

Query: 446 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 267
           H  +PL+  F  P +   +S ++ +F        P     P    T+ P+     +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162

Query: 266 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 171
           L   R+  + P  P    P+  N  PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194


>At1g19350.3 68414.m02405 brassinosteroid signalling positive
           regulator, putative similar to BZR1 protein [Arabidopsis
           thaliana] gi|20270971|gb|AAM18490
          Length = 357

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = -1

Query: 446 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 267
           H  +PL+  F  P +   +S ++ +F        P     P    T+ P+     +P SS
Sbjct: 132 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 184

Query: 266 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 171
           L   R+  + P  P    P+  N  PLP + S
Sbjct: 185 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 216


>At1g19350.1 68414.m02406 brassinosteroid signalling positive
           regulator, putative similar to BZR1 protein [Arabidopsis
           thaliana] gi|20270971|gb|AAM18490
          Length = 335

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = -1

Query: 446 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSS 267
           H  +PL+  F  P +   +S ++ +F        P     P    T+ P+     +P SS
Sbjct: 110 HNQSPLSSTFDSPILSYQVSPSSSSFP------SPSRVGDPHNISTIFPFLRNGGIP-SS 162

Query: 266 LKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 171
           L   R+  + P  P    P+  N  PLP + S
Sbjct: 163 LPPLRISNSAPVTPPVSSPTSRNPKPLPTWES 194


>At5g18260.1 68418.m02146 expressed protein
          Length = 320

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 305 VPYACPSNLPRSSLKNCRVYPALPNNPSSFC 213
           VP+  P+N   SSL +C  YP +  NP S C
Sbjct: 91  VPWETPTNNQSSSLTHCS-YPRVFCNPVSVC 120


>At3g24550.1 68416.m03083 protein kinase family protein contains
           Pfam domain PF00069: Protein kinase domain
          Length = 652

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 235 GKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSN 339
           G   Y    +NDD  K    A GT+  G  G+ SN
Sbjct: 579 GSTDYDTSQYNDDMIKFRKMALGTQEYGTTGEYSN 613


>At5g11990.1 68418.m01402 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 181

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -1

Query: 446 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLP 276
           H+P PL+     PP+  +I      F   +S  PP   +SP G  +  P + PS+ P
Sbjct: 75  HSPPPLSQSLSPPPLITVIHPPPPRFYYFESTPPPP-PLSPDGKGS--PPSVPSSPP 128


>At1g35660.1 68414.m04432 expressed protein
          Length = 1155

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = -1

Query: 575 VLKPPHPL*KSCWN*PWNATSGFPRPIVLSDPPADKRVFLSKFHTPAPLADRFGLPPI 402
           V+ PP P+   C + P  A + FP     +  P+ + V  +  +   P+     LPP+
Sbjct: 35  VIVPPKPVGFLCGSIPVLADNSFPASFTSALLPSQETVVTAPRYQMLPMETDLNLPPL 92


>At5g48650.1 68418.m06016 nuclear transport factor 2 (NTF2) family
           protein / RNA recognition motif (RRM)-containing protein
           
          Length = 458

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 332 PQTSEAGWIGLIRMQTLPLISASK*AEDQTCRQVEPVCGTLTRTL 466
           P+T +   +  I   T  +I+  K +E   C  V PVC  +++ L
Sbjct: 143 PETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVSKPL 187


>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
           importin alpha-2 subunit (Karyopherin alpha-2 subunit)
           (KAP alpha) SP:O04294 from [Arabidopsis thaliana]
          Length = 531

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 340 FGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSA 477
           F   + + +       D+S     + NL A  AG+W+ D N++L A
Sbjct: 50  FTSSMAFGSATGQTEQDLSSANQLKDNLPAMVAGIWSEDSNSQLEA 95


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,569,466
Number of Sequences: 28952
Number of extensions: 350580
Number of successful extensions: 1023
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)