Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D16
(599 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 172 3e-44
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ... 123 2e-29
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 30 0.22
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 29 0.39
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 28 1.2
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 26 4.8
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 25 6.4
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 25 6.4
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 172 bits (419), Expect = 3e-44
Identities = 86/190 (45%), Positives = 123/190 (64%), Gaps = 2/190 (1%)
Frame = +3
Query: 36 LKNNNIDYFVGCTALRASSTW--WSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRD 209
LK N + V C A ++ + W++VPMGPPD I GITEAYKKD K+NLG G YRD
Sbjct: 17 LKTNVSYHGVKCLASQSKRGFKVWADVPMGPPDPIFGITEAYKKDGDVKKMNLGAGTYRD 76
Query: 210 DEGKPFVLPSVRKAEEILHKKGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTV 389
D GKP+VLPSVR+AE L + L+ EYAPI+G ++ KLA+G+ + I+++ +
Sbjct: 77 DAGKPYVLPSVRQAETELLSQKLDKEYAPITGIPSFRVQATKLAYGDVYESIKDRL-VSA 135
Query: 390 QTLSGTGALRLGLEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFDPKTNGF 569
Q++SGTGAL + F+ + Y +K I++ PTWGNH + + L K Y+Y+DP T G
Sbjct: 136 QSISGTGALCIAANFLASFY-PSKTIYVSDPTWGNHKNVFSRAGLTVKSYKYYDPATRGL 194
Query: 570 DLQGALEDIS 599
D++G L D++
Sbjct: 195 DIKGMLSDLT 204
>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 409
Score = 123 bits (296), Expect = 2e-29
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
Frame = +3
Query: 99 WSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEILHKK-G 275
++N+ D I + Y +D P KVN+ VGAYRDD GKP++LP+V+KA +I+ ++
Sbjct: 6 FANIEEAKADAIFKLNAQYHQDEDPKKVNMSVGAYRDDTGKPWILPAVKKASKIVEEQAS 65
Query: 276 LNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAK 455
NHEY PI+G +T A A++ F + ++ ++Q++SGTGA L FI Y K
Sbjct: 66 FNHEYLPIAGLPRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVK 125
Query: 456 --AKEIWMPTPTWGNHPQICNMLKLPHKKYRYFDPKTNGFDLQGALEDI 596
+++ PTW H + L + Y Y+D K FD +G L I
Sbjct: 126 HTGAHVYISNPTWPVHRTLWEKLGVTVDTYPYWDAKNRSFDYEGMLSTI 174
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 30.3 bits (65), Expect = 0.22
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 230 DKWFPFIISVCSNTKVDLVGMCVFLVSFSDTQDHI 126
+ W +S CS+ K+D + + + FS+ QD+I
Sbjct: 410 EDWLSEFMSACSDCKIDFIACHWYGIDFSNLQDYI 444
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 29.5 bits (63), Expect = 0.39
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 224 WFPFIISVCSNTKVDLVGMCVFLVSFSDTQDHIWWA 117
WF + +C + + G+ VFL++ HIWWA
Sbjct: 373 WFSWANDICRDNDQER-GVVVFLMNMCQNIWHIWWA 407
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 105 NVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYR---DDEG--KPFVLPSVRKAEEILHK 269
+ P+ P DV LG +D+ N+VNL + G KP+ L S R + +
Sbjct: 255 STPLSPEDVDLGTYTVKNRDSWSNEVNLSASTNNLSTNTSGTLKPYSLSSSRSSS---YS 311
Query: 270 KGLN 281
KG+N
Sbjct: 312 KGVN 315
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 203 VCSNTKVDLVGMCVFLVSFSDTQDHIWWAHRHI 105
VC V C+FL SF + +++ W +H+
Sbjct: 47 VCDPKLQVAVRECLFLFSFQNDNEYLVWFKKHL 79
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -1
Query: 227 KWFPFIISVCSNTKVDLVGMCVFLVSFSDTQDHIWWAHRH 108
K+ P++ V +T+ ++ F +++ Q+ +W H H
Sbjct: 92 KFTPYMDGVPQSTQCEIPPGATFYYNYTALQNGTYWVHSH 131
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 262 FIKKV*IMNMLRSVVKQHILMRSPNWPLV 348
FI V +MN LR K +I+ +P PLV
Sbjct: 101 FIAAVVMMNYLRWFPKSYIVFMAPTKPLV 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,571,081
Number of Sequences: 5004
Number of extensions: 56854
Number of successful extensions: 145
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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