Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D16
(599 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7) 102 3e-22
SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0) 96 2e-20
SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 2.9
SB_13952| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7) 28 6.6
SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4) 28 6.6
SB_22460| Best HMM Match : CCT (HMM E-Value=4.4) 28 6.6
SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 28 6.6
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7)
Length = 130
Score = 102 bits (244), Expect = 3e-22
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +3
Query: 57 YFVGCTALRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLP 236
Y G A+R SS WWS+V GPPD ILG+TEA+K+DT+P K+NLGVGAYRDD GKP+VLP
Sbjct: 39 YAQGYAAVRLSS-WWSHVEAGPPDAILGVTEAFKRDTNPKKMNLGVGAYRDDTGKPYVLP 97
Query: 237 SVRKAEE 257
SV+KA +
Sbjct: 98 SVKKASD 104
>SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0)
Length = 512
Score = 95.9 bits (228), Expect = 2e-20
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Frame = +3
Query: 201 YRDDEGKPFVLPSVRKAEEILHKK----GLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQ 368
YRD++GKP+VLP V K E L + LNHEY I G ++DA KL G D I
Sbjct: 106 YRDNDGKPWVLPVVSKVETQLAQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIA 165
Query: 369 NKSNCTVQTLSGTGALRLGLEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPH-KKYRY 545
C +Q++SGTG++ LGL+F+ Y K ++ PTWGNH + + ++YRY
Sbjct: 166 QNRVCGIQSISGTGSVFLGLKFLYQFY-NCKTAYISKPTWGNHLKTLKAVGFTDIREYRY 224
Query: 546 FDPKTNGFDLQGALEDI 596
+ +T D ED+
Sbjct: 225 YKAETCSVDFDAMWEDL 241
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Frame = +3
Query: 84 ASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 263
AS+ + +VP+ P D + + Y KD P+K+NLGVGAYRD++GKP+VLP V K E L
Sbjct: 2 ASTNLFKDVPLVPTDHVFHVMACYNKDKDPSKINLGVGAYRDNDGKPWVLPVVSKVETQL 61
Query: 264 HK----KGLNHEYAPISGEAAYTDAVAKLAFGEDSQVI-QNK 374
+ LNHEY I G ++DA KL G D I QN+
Sbjct: 62 AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIAQNR 103
>SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +3
Query: 201 YRDDEGKPFVLPSVRKAEEILHK----KGLNHEYAPISGEAAYTDAVAKLAFGEDSQVI- 365
YRD++GKP+VLP V K E L + LNHEY I G ++DA KL G D I
Sbjct: 2 YRDNDGKPWVLPVVSKVETQLAQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIA 61
Query: 366 QNK 374
QN+
Sbjct: 62 QNR 64
>SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 126 DVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEILHKKGLNH 284
DV YK+D + NLGV AYR P +LP + +EI++ KG+ +
Sbjct: 84 DVACDSYHKYKEDVQLLR-NLGVKAYRFSISWPRILP--KGTKEIINTKGIEY 133
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 435 ITNHYAKAKEIWMPTPTWGNHPQICN 512
+T+ AK +W+ P++GN PQ N
Sbjct: 92 VTHRSAKESRLWLSEPSYGNWPQQLN 117
>SB_13952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 396 LSGTGALRLGLEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHK 533
L+G G E NH ++++ + T + +H ++C++ KLP++
Sbjct: 30 LTGVGDTNDNEEADVNHLENSQDVNVGTSSHSSHLEVCHLDKLPNE 75
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 207 DDEGKPFVLPSVRKAEEILHKKGLNHEYAPISGEA 311
D + KP + + +E +H K + H+YA SGE+
Sbjct: 171 DIDQKPTANSKMDEKKEFIHAKYIKHQYAQKSGES 205
>SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -3
Query: 333 WRPHQYMLLHH*SEHIHDLNLFYEESLLPSSLMVRQMVSLHHLCMLQHQG*PCWDVCLSC 154
W + ++H S + +LFY + LL + +++ +M H+ L C C+SC
Sbjct: 461 WLLNSSYNIYHFSALLFTTDLFYVKFLLDAFILLWRMPKYRHVVKLVWTRCCCCQCCVSC 520
>SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7)
Length = 421
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 255 LLPSSLMVRQMVSLHHLCMLQHQG 184
LLP V Q+V+LHH + HQG
Sbjct: 269 LLPRKHHVSQLVALHHHVKVHHQG 292
>SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4)
Length = 279
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 255 LLPSSLMVRQMVSLHHLCMLQHQG 184
LLP V Q+V+LHH + HQG
Sbjct: 127 LLPRKHHVSQLVALHHHVKVHHQG 150
>SB_22460| Best HMM Match : CCT (HMM E-Value=4.4)
Length = 313
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 255 LLPSSLMVRQMVSLHHLCMLQHQG 184
LLP V Q+V+LHH + HQG
Sbjct: 161 LLPRKHHVSQLVALHHHVKVHHQG 184
>SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 255 LLPSSLMVRQMVSLHHLCMLQHQG 184
LLP V Q+V+LHH + HQG
Sbjct: 96 LLPRKHHVSQLVALHHHVKVHHQG 119
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 255 LLPSSLMVRQMVSLHHLCMLQHQG 184
LLP V Q+V+LHH + HQG
Sbjct: 479 LLPRKHHVSQLVALHHHIKVHHQG 502
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 279 NHEYAPISGEAAY-TDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAK 455
+H + S E Y TD E I+N S C + +G+G ++I +HYAK
Sbjct: 58 DHIFENYSFEHEYPTDLPITSYHHEIVNTIENNSACVIFGPTGSGKTTQVPQYILDHYAK 117
Query: 456 AK 461
+
Sbjct: 118 QR 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,035,769
Number of Sequences: 59808
Number of extensions: 464419
Number of successful extensions: 1058
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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