Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D16
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 208 2e-54
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 208 2e-54
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 188 3e-48
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 30 1.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 29 3.3
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 27 7.7
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 27 7.7
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 208 bits (508), Expect = 2e-54
Identities = 101/176 (57%), Positives = 127/176 (72%)
Frame = +3
Query: 72 TALRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKA 251
TA+R S WWS+V MGPPD ILG+TEA+K D++P K+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 252 EEILHKKGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLE 431
E + L+ EYA I G +T A+LA GE+S VI+NK T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 432 FITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFDPKTNGFDLQGALEDIS 599
F++ YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI+
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIA 183
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 208 bits (508), Expect = 2e-54
Identities = 101/176 (57%), Positives = 127/176 (72%)
Frame = +3
Query: 72 TALRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKA 251
TA+R S WWS+V MGPPD ILG+TEA+K D++P K+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 252 EEILHKKGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLE 431
E + L+ EYA I G +T A+LA GE+S VI+NK T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 432 FITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFDPKTNGFDLQGALEDIS 599
F++ YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI+
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIA 183
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 188 bits (457), Expect = 3e-48
Identities = 89/182 (48%), Positives = 128/182 (70%), Gaps = 2/182 (1%)
Frame = +3
Query: 60 FVGCTALRASST--WWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVL 233
F+ T + A W+ NVP+ P D ILG+TEA+KKDT+PNK+NLGVGAYRDD+GKPFVL
Sbjct: 8 FMSTTTVTAQPVLPWFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVL 67
Query: 234 PSVRKAEEILHKKGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGA 413
+VR+AE+ + ++ EY+ I+G + AKLAFG++S+VI++ T Q++SGTGA
Sbjct: 68 RAVREAEQQIIDAKMDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGA 127
Query: 414 LRLGLEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFDPKTNGFDLQGALED 593
LR+G +F+ + +K ++ PTPTW NH + L + YRY++ +T GFD++GALED
Sbjct: 128 LRIGGQFV-EKFIPSKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALED 186
Query: 594 IS 599
IS
Sbjct: 187 IS 188
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 118 bits (283), Expect = 4e-27
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Frame = +3
Query: 93 TWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHK 269
+++ +P+ PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 270 KGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHY 449
LNHEY P+ G + A +L G +S I+ + + VQ LSGTGALR G EF+ +
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 450 AKAKEIWMPTPTWGNH 497
K +++ PTWGNH
Sbjct: 121 CNMKTVYVSNPTWGNH 136
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 86.2 bits (204), Expect = 2e-17
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 93 TWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHK 269
+++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H+
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 270 KGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHY 449
NHEY PI G + + L G DS I+ + +VQ +SGTGA+ +G EF+
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLA-QV 122
Query: 450 AKAKEIWMPTP 482
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -2
Query: 412 APVPDKVCTVQLLLF*MTWLSSPKANLATASVYAASPLIGAYS*FKPFL*RISSAFLTDG 233
+P+P + T L + + SSP A +T V +S I + S F ++S+ T G
Sbjct: 34 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSS--GTFPSSVASSPSTVG 91
Query: 232 KTNGFPSSSLYA 197
T+G SSS YA
Sbjct: 92 STSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -2
Query: 412 APVPDKVCTVQLLLF*MTWLSSPKANLATASVYAASPLIGAYS*FKPFL*RISSAFLTDG 233
+P+P + T L + + SSP A +T V +S I + S F ++S+ T G
Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSS--GTFPSSVASSPSTVG 298
Query: 232 KTNGFPSSSLYA 197
T+G SSS YA
Sbjct: 299 STSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -2
Query: 412 APVPDKVCTVQLLLF*MTWLSSPKANLATASVYAASPLIGAYS*FKPFL*RISSAFLTDG 233
+P+P + T L + + SSP A +T V +S I + S F ++S+ T G
Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSS--GTFPSSVASSPSTVG 298
Query: 232 KTNGFPSSSLYA 197
T+G SSS YA
Sbjct: 299 STSGAASSSSYA 310
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -3
Query: 339 PIWRPH---QYMLLHH*SEHIHDLNLFYEESLLPSSLMVRQMVSLHHLC 202
PIW +LL S+H+ ++EES++ +SL+V L+H C
Sbjct: 308 PIWASVACIHIILLESFSQHMSFYFYYHEESMMYASLLVSLSFGLYHEC 356
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 580 PWRSKPLVLGSK*RYFLCGNLSMLQICGW-LPHVGVGIQISLAFA 449
PW S PL L + YF C L++ + LP I S F+
Sbjct: 440 PWYSCPLTLENSTEYFCCAGLAIDLLSNLSLPEANNSIDTSFTFS 484
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 580 PWRSKPLVLGSK*RYFLCGNLSMLQICGW-LPHVGVGIQISLAFA 449
PW S PL L + YF C L++ + LP I S F+
Sbjct: 440 PWYSCPLTLENSTEYFCCAGLAIDLLSNLSLPEANNSIDTSFTFS 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,892
Number of Sequences: 27780
Number of extensions: 336969
Number of successful extensions: 644
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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