Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D15
(591 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 352 3e-96
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 336 2e-91
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 331 8e-90
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 329 2e-89
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 327 1e-88
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 326 2e-88
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 296 2e-79
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 288 8e-77
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 287 1e-76
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 262 4e-69
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 225 5e-58
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 223 2e-57
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 223 3e-57
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 221 1e-56
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 219 3e-56
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 175 8e-43
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 171 1e-41
UniRef50_A7CR48 Cluster: Putative uncharacterized protein; n=1; ... 111 1e-23
UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1; ... 109 4e-23
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 105 1e-21
UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3; ... 100 2e-20
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 99 9e-20
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 97 4e-19
UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8; A... 95 1e-18
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 94 2e-18
UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n... 93 3e-18
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 93 6e-18
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 92 8e-18
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 92 1e-17
UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1; ... 91 1e-17
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 91 2e-17
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 91 2e-17
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 90 4e-17
UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to ENSANGP000... 89 5e-17
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 89 5e-17
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 89 7e-17
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 88 1e-16
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 88 2e-16
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 88 2e-16
UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria ba... 88 2e-16
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 86 7e-16
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 86 7e-16
UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24; ... 86 7e-16
UniRef50_Q8VNS1 Cluster: EscN protein; n=11; Enterobacteriaceae|... 84 2e-15
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 83 4e-15
UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase, flag... 83 4e-15
UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1; M... 83 4e-15
UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1; R... 83 4e-15
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 83 5e-15
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 83 5e-15
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 83 5e-15
UniRef50_A4M4Z6 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 83 5e-15
UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase ... 82 1e-14
UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella denit... 82 1e-14
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 82 1e-14
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 82 1e-14
UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta s... 81 1e-14
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 81 2e-14
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 81 3e-14
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 80 3e-14
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 80 3e-14
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 79 8e-14
UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26; ... 79 8e-14
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 79 1e-13
UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16; Alphapr... 78 1e-13
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 78 2e-13
UniRef50_A6GN32 Cluster: Type III secretion protein; n=1; Limnob... 77 3e-13
UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secreto... 77 3e-13
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 76 5e-13
UniRef50_Q5JIR3 Cluster: V-type ATP synthase alpha chain; n=12; ... 76 5e-13
UniRef50_P85088 Cluster: ATP synthase subunit beta, mitochondria... 76 7e-13
UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:... 75 9e-13
UniRef50_A7BUC4 Cluster: V-type ATPase subunit A; n=1; Beggiatoa... 75 9e-13
UniRef50_O57728 Cluster: V-type ATP synthase alpha chain (EC 3.6... 75 9e-13
UniRef50_Q9UXU7 Cluster: V-type ATP synthase alpha chain (EC 3.6... 75 9e-13
UniRef50_Q3J9F3 Cluster: Sodium-transporting two-sector ATPase; ... 74 3e-12
UniRef50_Q74MJ7 Cluster: V-type ATP synthase alpha chain; n=1; N... 74 3e-12
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 73 4e-12
UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit... 73 4e-12
UniRef50_A6QSP8 Cluster: Vacuolar ATP synthase catalytic subunit... 73 5e-12
UniRef50_Q9HNE3 Cluster: V-type ATP synthase alpha chain; n=21; ... 73 5e-12
UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5; Ar... 73 7e-12
UniRef50_Q9RWG8 Cluster: V-type ATP synthase alpha chain; n=61; ... 72 1e-11
UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10; ... 71 2e-11
UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase, alph... 71 2e-11
UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n... 71 3e-11
UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:... 71 3e-11
UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11; ... 69 1e-10
UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;... 69 1e-10
UniRef50_A7B5P4 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_A1GDC5 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q874G5 Cluster: Vacuolar membrane ATPase subunit a; n=7... 68 2e-10
UniRef50_Q97CQ0 Cluster: V-type ATP synthase alpha chain (EC 3.6... 68 2e-10
UniRef50_A5DXZ0 Cluster: Vacuolar ATP synthase catalytic subunit... 67 3e-10
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 67 3e-10
UniRef50_Q4S553 Cluster: Chromosome 6 SCAF14737, whole genome sh... 66 4e-10
UniRef50_A5ZRD0 Cluster: Putative uncharacterized protein; n=2; ... 66 4e-10
UniRef50_Q6L1S7 Cluster: A1AO H+ ATPase subunit A; n=1; Picrophi... 66 4e-10
UniRef50_P17255 Cluster: Vacuolar ATP synthase catalytic subunit... 66 4e-10
UniRef50_A3LP04 Cluster: Vacuolar H+-ATPase V1 sector, subunit A... 66 6e-10
UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia xen... 65 1e-09
UniRef50_Q6BRM0 Cluster: Debaryomyces hansenii chromosome D of s... 64 2e-09
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 64 3e-09
UniRef50_A4EBH3 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22; cel... 62 7e-09
UniRef50_A0FYQ8 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q822J8 Cluster: V-type ATP synthase alpha chain; n=15; ... 59 7e-08
UniRef50_Q8A875 Cluster: V-type ATP synthase subunit A; n=9; Bac... 58 1e-07
UniRef50_Q7QUD4 Cluster: GLP_59_34747_32780; n=2; Giardia intest... 56 5e-07
UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5; Bacteria... 56 6e-07
UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney... 56 6e-07
UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25; ... 56 8e-07
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 55 1e-06
UniRef50_A6AXF1 Cluster: VcsN2; n=7; Vibrio|Rep: VcsN2 - Vibrio ... 54 2e-06
UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19; B... 54 3e-06
UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9; Chlamy... 52 8e-06
UniRef50_UPI00005F655A Cluster: COG1157: Flagellar biosynthesis/... 52 1e-05
UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax... 50 3e-05
UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3; P... 50 4e-05
UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2; Mycoplas... 48 2e-04
UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia cen... 48 2e-04
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 46 5e-04
UniRef50_P45835 Cluster: Transcription termination factor rho; n... 46 9e-04
UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10; Candi... 45 0.001
UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9; Bac... 44 0.003
UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25; Pro... 44 0.004
UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3; ... 43 0.005
UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplas... 43 0.006
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 42 0.014
UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4; Dinophyc... 41 0.025
UniRef50_A4QMK9 Cluster: ORF56c; n=1; Pinus koraiensis|Rep: ORF5... 40 0.044
UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n... 39 0.10
UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase; ... 39 0.10
UniRef50_UPI000050FC6C Cluster: COG0130: Pseudouridine synthase;... 38 0.13
UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9; Trypanosomat... 38 0.23
UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1; Myco... 38 0.23
UniRef50_A0E2E9 Cluster: Chromosome undetermined scaffold_75, wh... 37 0.31
UniRef50_A4XBZ2 Cluster: Putative uncharacterized protein; n=2; ... 37 0.41
UniRef50_A1AMJ4 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_A7QS49 Cluster: Chromosome chr5 scaffold_156, whole gen... 37 0.41
UniRef50_Q8J0G3 Cluster: Vacuolar membrane H-ATPase; n=1; Zygosa... 37 0.41
UniRef50_A7U5X6 Cluster: ATP synthase beta subunit; n=3; Rhizobi... 36 0.71
UniRef50_A5TX87 Cluster: Transcription termination factor Rho; n... 36 0.71
UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.94
UniRef50_Q29I76 Cluster: GA11481-PA; n=1; Drosophila pseudoobscu... 35 1.6
UniRef50_O46205 Cluster: Zinc-finger nuclear protein hindsight; ... 35 1.6
UniRef50_P0AG33 Cluster: Transcription termination factor rho; n... 35 1.6
UniRef50_Q57983 Cluster: Probable modification methylase MJ0563;... 35 1.6
UniRef50_A7H9J7 Cluster: H+transporting two-sector ATPase alpha/... 34 2.2
UniRef50_Q17NB2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_A5DQ83 Cluster: Predicted protein; n=1; Pichia guillier... 34 2.2
UniRef50_Q4T7C6 Cluster: Chromosome undetermined SCAF8147, whole... 34 2.9
UniRef50_Q8F7C5 Cluster: Transcription termination factor rho; n... 34 2.9
UniRef50_A1R6E4 Cluster: Putative lipoprotein; n=1; Arthrobacter... 34 2.9
UniRef50_A4S446 Cluster: MFS family transporter: multidrug efflu... 34 2.9
UniRef50_Q92HL2 Cluster: Transcription termination factor rho; n... 34 2.9
UniRef50_Q5Z0T1 Cluster: Putative Mce family protein; n=1; Nocar... 33 3.8
UniRef50_Q2W882 Cluster: Autotransporter adhesin; n=3; Magnetosp... 33 3.8
UniRef50_Q55E77 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_Q75CH9 Cluster: ACL060Cp; n=1; Eremothecium gossypii|Re... 33 3.8
UniRef50_O67031 Cluster: Transcription termination factor rho; n... 33 3.8
UniRef50_A7T6I1 Cluster: Predicted protein; n=2; Nematostella ve... 33 5.0
UniRef50_Q00174 Cluster: Laminin subunit alpha precursor; n=7; D... 33 5.0
UniRef50_UPI0000D9D3C2 Cluster: PREDICTED: hypothetical protein;... 33 6.6
UniRef50_A6EG48 Cluster: Possible TonB-dependent receptor; n=1; ... 33 6.6
UniRef50_A3TNY9 Cluster: Zinc-binding dehydrogenase; n=5; Actino... 33 6.6
UniRef50_Q9FL22 Cluster: Arabidopsis thaliana genomic DNA, chrom... 33 6.6
UniRef50_Q6EUF7 Cluster: Disease resistance protein Cf-2.1-like;... 33 6.6
UniRef50_A2X2Q7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.6
UniRef50_Q7PNR2 Cluster: ENSANGP00000021704; n=3; Anopheles gamb... 33 6.6
UniRef50_O76602 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A7ETU8 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 6.6
UniRef50_P52157 Cluster: Transcription termination factor rho; n... 33 6.6
UniRef50_Q3UUA2 Cluster: Adult male spinal cord cDNA, RIKEN full... 32 8.7
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n... 32 8.7
UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase alpha/... 32 8.7
UniRef50_A3Y7V9 Cluster: Allophanate hydrolase subunit 2; n=1; M... 32 8.7
UniRef50_Q4DPQ2 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 352 bits (866), Expect = 3e-96
Identities = 172/189 (91%), Positives = 179/189 (94%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
VLIMELINNVAKAHGG+SVFAGVGERTREGNDLYHEM GVI TSKV+LVYGQMN
Sbjct: 214 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMN 273
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGARARVALTGLT+AE+FRD+EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP
Sbjct: 274 EPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 333
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLATDMG MQERITTTK GSITSVQA+YVPADDLTDPAPATTFAHLDATTVLSRAIAELG
Sbjct: 334 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 393
Query: 543 VYPAVDPLD 569
+YPAVDPLD
Sbjct: 394 IYPAVDPLD 402
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 336 bits (826), Expect = 2e-91
Identities = 164/189 (86%), Positives = 176/189 (93%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
V I ELINN+AKAHGGFSVF GVGERTREGNDLY EMK GVI + + SKV+LV+GQMN
Sbjct: 198 VFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGE-SKVALVFGQMN 256
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGARARVALTGLT+AE+FRD+EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP
Sbjct: 257 EPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 316
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLATDMG +QERITTTK GS+TSVQAVYVPADDLTDPAPATTFAHLDATTVLSR I+ELG
Sbjct: 317 TLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELG 376
Query: 543 VYPAVDPLD 569
+YPAVDPLD
Sbjct: 377 IYPAVDPLD 385
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 331 bits (813), Expect = 8e-90
Identities = 163/191 (85%), Positives = 173/191 (90%), Gaps = 2/191 (1%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVIT--DDYKTSKVSLVYGQ 176
VLIMELINNVAKAHGGFSVFAGVGERTREGNDLY EM GVI + SK +LVYGQ
Sbjct: 242 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQ 301
Query: 177 MNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 356
MNEPPGARARV LTGLT+AE+FRD EGQDVLLFIDNIFRFTQA SEVSALLGRIPSAVGY
Sbjct: 302 MNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGY 361
Query: 357 QPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAE 536
QPTLA+D+G +QERITTTK GSITSVQA+YVPADDLTDPAPATTFAHLDATTVLSR I+E
Sbjct: 362 QPTLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISE 421
Query: 537 LGVYPAVDPLD 569
LG+YPAVDPLD
Sbjct: 422 LGIYPAVDPLD 432
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 329 bits (809), Expect = 2e-89
Identities = 159/195 (81%), Positives = 175/195 (89%), Gaps = 6/195 (3%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDY------KTSKVSL 164
VLI ELINN+AK HGGFSVFAGVGERTREGNDLYHE GVI D + SKV+L
Sbjct: 164 VLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFLEAGVIASDKDGNAISEGSKVAL 223
Query: 165 VYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPS 344
VYGQMNEPPGARARVAL+GLT+AE+FRD+EGQDVL F+DNIFRFTQAG+EVSALLGRIPS
Sbjct: 224 VYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPS 283
Query: 345 AVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR 524
AVGYQPTLATDMG +QERIT+TK GSITSVQA+YVPADDLTDPAPA +FAHLDATTVLSR
Sbjct: 284 AVGYQPTLATDMGQLQERITSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSR 343
Query: 525 AIAELGVYPAVDPLD 569
AI+E+G+YPAVDPLD
Sbjct: 344 AISEMGIYPAVDPLD 358
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 327 bits (803), Expect = 1e-88
Identities = 163/190 (85%), Positives = 172/190 (90%), Gaps = 1/190 (0%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDY-KTSKVSLVYGQM 179
VLIMELINNVAKAHGG+SVFAGVGERTREGNDLYHEM GV + SK +LVYGQM
Sbjct: 190 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQM 249
Query: 180 NEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQ 359
NEPPGARARVALTGLT+AE FRD EGQDVL F+DNIFRFTQAGSEVSALLGRIPSAVGYQ
Sbjct: 250 NEPPGARARVALTGLTVAEQFRD-EGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQ 308
Query: 360 PTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 539
PTLATDMG MQERITTT GSITSVQA+YVPADDLTDPAPAT+FAHLDATTVLSR+IAE
Sbjct: 309 PTLATDMGQMQERITTTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEK 368
Query: 540 GVYPAVDPLD 569
G+YPAVDPLD
Sbjct: 369 GIYPAVDPLD 378
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 326 bits (802), Expect = 2e-88
Identities = 160/193 (82%), Positives = 177/193 (91%), Gaps = 4/193 (2%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVI--TDDYKT--SKVSLVY 170
V+I ELINN+AKAHGG SVFAGVGERTREGNDLY EM+ GVI +D T SKV+LVY
Sbjct: 170 VIIQELINNIAKAHGGVSVFAGVGERTREGNDLYFEMQDAGVIKIAEDGSTEGSKVALVY 229
Query: 171 GQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 350
GQMNEPPGAR+RVALTGL+LAE+FRD+EGQDVL F+DNIFRFTQAGSEVSALLGRIPSAV
Sbjct: 230 GQMNEPPGARSRVALTGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAV 289
Query: 351 GYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAI 530
GYQPTLAT+MG +QERIT+TK GSITSVQAVYVPADDLTDPAPA TFAHLDATTVL+R+I
Sbjct: 290 GYQPTLATEMGALQERITSTKKGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSI 349
Query: 531 AELGVYPAVDPLD 569
AE+G+YPAVDPLD
Sbjct: 350 AEMGIYPAVDPLD 362
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 296 bits (727), Expect = 2e-79
Identities = 144/189 (76%), Positives = 162/189 (85%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
VL+ME+I N+A H GFS+FAGVGERTREGNDLY EM GV+ + LV+GQMN
Sbjct: 163 VLVMEMIRNIAIEHHGFSIFAGVGERTREGNDLYLEMTEAGVLNNTV------LVFGQMN 216
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGAR RVALT LT+AE+FRD EG+DVLLFIDNIFRF QAGSEVSALLGR+PSAVGYQP
Sbjct: 217 EPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP 276
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TL+TDMG +QERIT+TK GSITSVQA+YVPADD+TDPAPATTF HLDAT VLSR +A LG
Sbjct: 277 TLSTDMGELQERITSTKKGSITSVQAIYVPADDITDPAPATTFTHLDATIVLSRQLAALG 336
Query: 543 VYPAVDPLD 569
+YPAVDPLD
Sbjct: 337 LYPAVDPLD 345
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 288 bits (706), Expect = 8e-77
Identities = 153/214 (71%), Positives = 169/214 (78%), Gaps = 25/214 (11%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVIT---------------- 134
VLIMELINN+AK H GFSVFAGVGERTREGNDL EM GVI
Sbjct: 165 VLIMELINNIAKKHNGFSVFAGVGERTREGNDLLREMIESGVIRYGEAFKESMEKGHWDL 224
Query: 135 -----DDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD---KEG-QDVLLFIDNI 287
++ + S+ +LV+GQMNEPPGARA VAL+GLT+AE FRD K G +D+L FIDNI
Sbjct: 225 SKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMGAKSGARDILFFIDNI 284
Query: 288 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLT 467
FRFTQAGSEVSALLGR+PSAVGYQPTLAT+MG MQERIT+TK GSITSVQAVYVPADDLT
Sbjct: 285 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERITSTKTGSITSVQAVYVPADDLT 344
Query: 468 DPAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
DPAPATTF HLDATTVLSR I ELG+YPAVDPL+
Sbjct: 345 DPAPATTFTHLDATTVLSRKITELGIYPAVDPLE 378
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 287 bits (705), Expect = 1e-76
Identities = 149/214 (69%), Positives = 168/214 (78%), Gaps = 25/214 (11%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVIT---------------- 134
VLI ELINN+AKA+ G SVFAGVGERTREGNDL EM G++
Sbjct: 162 VLIQELINNIAKAYAGVSVFAGVGERTREGNDLLREMIESGIVNYGEEFEKALHEGGWPL 221
Query: 135 -----DDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEG----QDVLLFIDNI 287
+ K SK + V+GQMNEPPGARARVAL+GL++AE+FRD +G D+L FIDNI
Sbjct: 222 DKIDREKLKESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGDGTGKGNDILFFIDNI 281
Query: 288 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLT 467
FRFTQAGSEVSALLGR+PSAVGYQPTLAT+MG MQERIT+TK GSITSVQA+YVPADDLT
Sbjct: 282 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGVMQERITSTKRGSITSVQAIYVPADDLT 341
Query: 468 DPAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
DPAPATTFAHLDATTVLSR +A LG+YPAVDPLD
Sbjct: 342 DPAPATTFAHLDATTVLSRKLASLGIYPAVDPLD 375
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 262 bits (642), Expect = 4e-69
Identities = 129/196 (65%), Positives = 156/196 (79%), Gaps = 8/196 (4%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVI------TDDYKT--SKV 158
VLIMELI N+A +H G S+F+G+GER+RE NDLY EM+ G+I ++ Y + SKV
Sbjct: 239 VLIMELIRNLAYSHNGLSLFSGIGERSREANDLYVEMQESGIILLAEDSSNPYFSAESKV 298
Query: 159 SLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRI 338
+LV+GQMN+ PGAR RVA LT+AE+FRD GQD+L+F+DNIFRF QAGSE+S LLGR+
Sbjct: 299 ALVFGQMNDTPGARFRVANAALTMAEYFRDVNGQDLLVFMDNIFRFVQAGSELSTLLGRM 358
Query: 339 PSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 518
PSAVGYQPTLAT+MG +QERI T GSITS+QAVYVPADD+TDPAP F HLDA TVL
Sbjct: 359 PSAVGYQPTLATEMGTLQERIVPTLFGSITSIQAVYVPADDITDPAPVAIFTHLDAITVL 418
Query: 519 SRAIAELGVYPAVDPL 566
SR +A G+YPAVDPL
Sbjct: 419 SRGLAAKGIYPAVDPL 434
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 225 bits (551), Expect = 5e-58
Identities = 105/189 (55%), Positives = 141/189 (74%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
V++ ELIN K H G SVFAG+GER REG++L+ E + G + +K + ++GQMN
Sbjct: 460 VIVQELINAFIKFHDGVSVFAGIGERIREGHELWKEAEALGFL------NKTAFIFGQMN 513
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
E PG R R ++G+ +AE+FR+ G+ VLLF+DNIFR+ QAGSE+S+LL + PSAVGYQP
Sbjct: 514 ESPGLRFRSGISGVKVAEYFRNNLGKSVLLFMDNIFRYVQAGSEISSLLEKTPSAVGYQP 573
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TL ++MG +QERI +TK G ITS+QA+Y+PADD TDPA FAH D+T +LSR +A G
Sbjct: 574 TLFSEMGQLQERINSTKDGDITSIQAMYIPADDFTDPAAVAAFAHFDSTIILSRQLAAEG 633
Query: 543 VYPAVDPLD 569
VYPA+DPL+
Sbjct: 634 VYPAIDPLE 642
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 223 bits (546), Expect = 2e-57
Identities = 107/188 (56%), Positives = 140/188 (74%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
VL+MEL++ + + H G SVFAGVGER REG++L+HEMK GV+ K +V+GQM+
Sbjct: 177 VLLMELMHAIIQLHQGTSVFAGVGERIREGHELWHEMKSAGVM------DKTLMVFGQMD 230
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
E PG R R L+ LT AE+ RD G +VL +DNI+RF QAGSE+S LLGR+P++VGYQP
Sbjct: 231 ESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVDNIYRFVQAGSEISGLLGRMPASVGYQP 290
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TL T++ ++ER+T+T G++TSVQAVYVPADD++DPA HLD+ VLSRA A G
Sbjct: 291 TLMTEIAELEERMTSTAKGAVTSVQAVYVPADDMSDPAVTGIITHLDSIIVLSRAQAGKG 350
Query: 543 VYPAVDPL 566
+YPAVDPL
Sbjct: 351 IYPAVDPL 358
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 223 bits (544), Expect = 3e-57
Identities = 104/188 (55%), Positives = 143/188 (76%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
V +MELI+ + + + G SVFAG+GER+REG+++ +M+ GV+ + LVYGQMN
Sbjct: 193 VFVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVL------GRTVLVYGQMN 246
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGAR RV LT L +AE+FRD+ Q+VLL +DN+FRF QAG+EVS LLGR+PS VGYQP
Sbjct: 247 EPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQP 306
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLA+++ +QERI + + ++T+++AVYVPADD TDPA AH+D+ VLSRA+A G
Sbjct: 307 TLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEG 366
Query: 543 VYPAVDPL 566
+YPA+DP+
Sbjct: 367 MYPAIDPV 374
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 221 bits (539), Expect = 1e-56
Identities = 107/188 (56%), Positives = 142/188 (75%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
VL+MELI+ + + + G SVFAGVGER+REG+++ +M+ GV+ LVYGQMN
Sbjct: 163 VLVMELIHAMVERYRGISVFAGVGERSREGHEMLLDMRNSGVLPHTV------LVYGQMN 216
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGAR RV LT L++AE+FRD+ Q+VLL +DN+FRF QAG+EVS LLGR+PS VGYQP
Sbjct: 217 EPPGARWRVPLTALSIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQP 276
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLA ++ +QERI + ++T+++AVYVPADD TDPA AH+D+ VLSRA+A G
Sbjct: 277 TLADEVAALQERIVSVGGVAVTAIEAVYVPADDFTDPAVTALAAHVDSMVVLSRAMAAQG 336
Query: 543 VYPAVDPL 566
+YPAVDP+
Sbjct: 337 MYPAVDPI 344
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 219 bits (536), Expect = 3e-56
Identities = 104/188 (55%), Positives = 136/188 (72%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
V++ ELIN K H G SVF+G+GER REG++L+ E K G + K + ++GQMN
Sbjct: 372 VVVQELINTFIKHHDGVSVFSGIGERIREGHELWEEAKELGFL------DKTTFIFGQMN 425
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
E PG R R TG+ +AE+FR+ G++VLLF+DNIFR+ QAGSEVS+LL + PSAVGYQP
Sbjct: 426 ESPGLRLRSGFTGVKVAEYFRNNLGKNVLLFMDNIFRYMQAGSEVSSLLEKTPSAVGYQP 485
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
L +++G +QERI + G ITS+QA+Y+PADD TDPA FAH DAT +LSR +A G
Sbjct: 486 MLVSEIGKLQERINSNNDGDITSIQAMYIPADDFTDPAAVAAFAHFDATIILSRQLAAEG 545
Query: 543 VYPAVDPL 566
+YPAVDPL
Sbjct: 546 LYPAVDPL 553
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 175 bits (425), Expect = 8e-43
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 3/191 (1%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSV---FAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYG 173
++I ELI N+++ V F G GERTRE +LY E+ +I SL
Sbjct: 153 IIIKELIFNISRQRDSNDVKVFFVGTGERTREAKELYDELVNSSLI------KSTSLFIS 206
Query: 174 QMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVG 353
QMNEP G+R ++ G+T AE+ RD E +DVL F+DNI+R+ QAG E+S LG+ PS G
Sbjct: 207 QMNEPSGSRMKILPVGITAAEYARDSEQKDVLFFVDNIYRYLQAGRELSFSLGKKPSEAG 266
Query: 354 YQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIA 533
YQ TL +D+ ++QER+ +K GSITS Q V++P DDL DPA HLD++ VLSR I
Sbjct: 267 YQATLVSDISSVQERLANSKHGSITSFQTVFLPMDDLNDPASVAILNHLDSSLVLSREIF 326
Query: 534 ELGVYPAVDPL 566
G++PA+DPL
Sbjct: 327 AEGLFPAIDPL 337
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 171 bits (415), Expect = 1e-41
Identities = 85/171 (49%), Positives = 115/171 (67%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
S+F G GER+REG +LY E+K ++ K + QMNE PGAR + G+T A
Sbjct: 181 SIFIGSGERSREGLELYDELKNSKLL------DKTVMFISQMNEAPGARMSIVPVGITAA 234
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+ RD+E ++VLLFIDNI+RF QA SEVSA LG+ PS GYQPTL T++ + +R+
Sbjct: 235 EYLRDREKENVLLFIDNIYRFVQASSEVSATLGKKPSLGGYQPTLDTEVSFVHDRLFLNA 294
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT+ + V++P DDLTDP+ + F+HLD++ VLSR A +YPA DPL
Sbjct: 295 NGSITTFETVFLPMDDLTDPSAVSIFSHLDSSMVLSRDQAAKNIYPAFDPL 345
>UniRef50_A7CR48 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 488
Score = 111 bits (267), Expect = 1e-23
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Frame = -2
Query: 560 VDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFLHIT 381
+DG + D + R V++ + G V +V+G DV LH DGA F GGD FL
Sbjct: 140 IDGGIDAEFGDGAFENDRRVEVGKGVGGRRVGEVVGRDVNGLHGGDGAFFRGGDAFLQDA 199
Query: 380 HVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCESNPS 201
H G+C LV D G ++G GLRE+ED++++ + +L LV+E+L + E N
Sbjct: 200 HFVGECGLVADGGGGASEEGGDFGAGLRETEDVVDEEENVLVFLVAEVLGHGERGEGNAH 259
Query: 200 SGTWRFVHLPVNQGDLGSFIVVCNNASDF-HFMVEIVPLARPLPYAGKNRESTVSFRHIV 24
+G FVHL VN+GD G VV + S F HF+V++V A A K+ + V +V
Sbjct: 260 TGARGFVHLAVNEGDFGFAEVVLVDDSGFAHFVVKVVAFAGAFTDASKHGVAAVGLGDVV 319
Query: 23 YQFHDE 6
+F ++
Sbjct: 320 DEFEND 325
>UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1;
Comamonas testosteroni KF-1|Rep: Putative
uncharacterized protein - Comamonas testosteroni KF-1
Length = 534
Score = 109 bits (263), Expect = 4e-23
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Frame = -2
Query: 569 VQRVDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFL 390
VQRV G V T SD +Q+S+ RG V QVIGW V L D A GGDT L
Sbjct: 163 VQRVHGGVDTQRSDVTGQHHGGIQVSKGRGWRGVGQVIGWHVNGLDGSDRAHLGGGDTLL 222
Query: 389 HITHVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCES 210
+TH Q LV G + +Q + G + D++++ Q++L+ V+E Q +
Sbjct: 223 QLTHFFSQGRLVAHGGRHTAQQSGHFGTGQCVAVDVVHEEQHVLA-FVTESFGHGQTGQR 281
Query: 209 NPSSGTWRFVHLPVNQGDLGSFIV-VCNNASDFHFMVEIVPLARPLPYAGKNRESTVSFR 33
N + +WR VHL VN G+LG V + +NA HF++E++ A + GK+R++TV+
Sbjct: 282 NAQTVSWRLVHLTVNHGNLGFVQVGLVHNAGIRHFVIEVIAFAGTFTHTGKHRQTTVALG 341
Query: 32 HIVYQFHDEH 3
+V + H H
Sbjct: 342 DVVDELHHVH 351
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 105 bits (251), Expect = 1e-21
Identities = 68/184 (36%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Frame = +3
Query: 18 LINNVAKAHGG-FSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ VA+A +V A VGER RE + + E +G + + S V V +P
Sbjct: 171 LLGMVARATAADCNVIALVGERGREVRE-FIEKDLG---EEGLRRSVV--VVATSEQPSL 224
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
R R AL +AE+FRD G DV+L +D++ R A EV +G P+ GY P++
Sbjct: 225 VRIRAALMATAIAEYFRDAHGLDVILMMDSVTRLAHAQREVGLAVGEPPATRGYTPSVFA 284
Query: 375 DMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPA 554
+ + ER T AGS+T V V V DD+ +P + LD VLSR +A G YPA
Sbjct: 285 MLPRVLERSGTGPAGSVTGVYTVLVDGDDMNEPVADAVRSILDGHVVLSRKLANAGHYPA 344
Query: 555 VDPL 566
+DPL
Sbjct: 345 IDPL 348
>UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Oceanicola batsensis HTCC2597
Length = 620
Score = 100 bits (240), Expect = 2e-20
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Frame = -2
Query: 569 VQRVDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFL 390
V+RV G V L D + R V++ E RGR V QV+ +V L D GD FL
Sbjct: 134 VERVHGRVDAKLRDRTVENRRRVEVGEGRGRRRVGQVVRGNVDGLDRGDRPVLGRGDPFL 193
Query: 389 HITHVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCES 210
H HV GQ LV ++ R+L L E+ED++++ Q + V+E+ Q +
Sbjct: 194 HRAHVGGQRRLVAHGRGNTTQKRRHLRARLSEAEDVVDEEQNVRPGRVAELFRQRQAGKG 253
Query: 209 NPSSGTWRFVHLPVNQGDLG-SFIVVCNNASDFHFMVEIVPLARPLPYAGKNRESTVSFR 33
+P + T RFVHL V+QGDLG +V NA H +VE+V LA P + G++ ++ V
Sbjct: 254 DPRARTRRFVHLAVDQGDLGIRQVVRGQNARLDHLVVEVVALAGPFAHTGEHGQTRVHLG 313
Query: 32 HIVYQFHDEH 3
+V QF DE+
Sbjct: 314 DVVDQFLDEN 323
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 98.7 bits (235), Expect = 9e-20
Identities = 64/176 (36%), Positives = 94/176 (53%)
Frame = +3
Query: 39 AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALT 218
A +V A +GER RE N+ + E +G + K S V V + P R + A+T
Sbjct: 183 AKADLNVIALIGERGREVNE-FIEKDLG---EEGLKRSVV--VVATSDTPALVRVKGAMT 236
Query: 219 GLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER 398
+AE+FRD +G DVLL +D+I RF A E+ +G P + GY P++ + + + ER
Sbjct: 237 ATAIAEYFRD-QGLDVLLMMDSITRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLER 295
Query: 399 ITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
+++ GSIT++ V V DDL +P LD VLSR +A YPA+D L
Sbjct: 296 SGSSQKGSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVL 351
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 96.7 bits (230), Expect = 4e-19
Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLY-HEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTL 230
SV A +GER RE D H++ G+ + +V +E P AR R A T +
Sbjct: 189 SVIALIGERGREVMDFVAHDLGPEGL-------KRSVIVSATSDESPLARVRGAYTATAI 241
Query: 231 AEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTT 410
AE+FRD +G+ VLL D++ RF +A E+ G +P+ GY P + + + ER +
Sbjct: 242 AEYFRD-QGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAGSF 300
Query: 411 KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GS+T+ V V DDL +P +D VLSRA+A+ YPA+D L
Sbjct: 301 SMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNHYPAIDVL 352
>UniRef50_O54249 Cluster: Flagellum-specific ATP synthase; n=8;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Rhizobium meliloti (Sinorhizobium meliloti)
Length = 467
Score = 95.1 bits (226), Expect = 1e-18
Identities = 63/172 (36%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A VGER RE + + + D+ SK V +E P R LT +T+AE
Sbjct: 203 VIALVGERGREVREFIED-----TLGDNL--SKSVAVVATSDESPMLRKMAPLTAVTIAE 255
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERIT--TT 410
H+RDK G +VLL +D++ RF A EV+ G P A GY ++ T++ + ER
Sbjct: 256 HYRDK-GDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAE 314
Query: 411 KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
AG+IT++ ++ V D+ DP + LD VL R++AE G YP V+PL
Sbjct: 315 GAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPL 366
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 94.3 bits (224), Expect = 2e-18
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Frame = +3
Query: 18 LINNVA-KAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
LI+ VA A +V A +GER RE +D G + ++ +V + P
Sbjct: 177 LIDTVAANAKADLAVIALIGERAREVSDFVTRHMSGA------ERGRMVVVAVPADHAPN 230
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
R R A +AEHFR K G+ VLL +D++ R A E++ +LG +A GY P+ +
Sbjct: 231 LRLRAAQYASAIAEHFRAK-GRKVLLVLDSLTRVAHAARELALVLGEPGAARGYPPSALS 289
Query: 375 DMGNMQERI--TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVY 548
+ + ER T G++T + +V DD +DP T A LD VLSR +A+ G Y
Sbjct: 290 TITRLVERAGNCATSGGAVTGIYSVLADGDDTSDPVVDTARAILDGHLVLSRELAQRGHY 349
Query: 549 PAVD 560
PA+D
Sbjct: 350 PAID 353
>UniRef50_Q0C5J4 Cluster: Flagellar protein export ATPase FliI; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Flagellar protein
export ATPase FliI - Hyphomonas neptunium (strain ATCC
15444)
Length = 462
Score = 93.5 bits (222), Expect = 3e-18
Identities = 64/172 (37%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A +GER+RE + + V T +KT VS +E PGA+ R A + AE
Sbjct: 183 VIALIGERSREVGEF---VNVNLPETVRHKTVVVSAT---ASESPGAKKRAAYCAMATAE 236
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERIT--TT 410
HFRD +G VL D+I RF +A EV+ L G P+ + P+ + + ER T
Sbjct: 237 HFRD-QGHSVLFLFDSITRFAEAHREVALLAGETPALNAFPPSTVRVIAELAERAGPGTG 295
Query: 411 KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
G IT + +V V DL +P LD +LSR IAE G YPA+D L
Sbjct: 296 AKGDITGIFSVLVAGSDLEEPVADMIRGILDGHIILSRNIAERGRYPAIDVL 347
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 92.7 bits (220), Expect = 6e-18
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ +AK ++ +V A +GER RE N+ + E ++G + + K LV +E P
Sbjct: 174 LLGMIAKNSNADVNVIAFIGERGRELNE-FIEHELG-----EERLKKSVLVVSTSDESPI 227
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
+R + A +AE+FR+ +G+DV L D+I RF A E+S LG P A GY P++
Sbjct: 228 SRYKGAYVATMIAEYFRE-QGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFV 286
Query: 375 DMGNMQERI-TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYP 551
++ + ER GS+T V V DD T+P A LD +L R + + G+YP
Sbjct: 287 EIPILLERSGFNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYP 346
Query: 552 AVDPL 566
+++ L
Sbjct: 347 SINVL 351
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 92.3 bits (219), Expect = 8e-18
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Frame = +3
Query: 57 VFAGVGERTREGND-LYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
VF +GER RE + L HE+ DD S+ LV + RAR A T +A
Sbjct: 206 VFGLIGERGRELREFLDHEL-------DDELRSRTVLVCSTSDRSSMERARAAFTATAIA 258
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E +R EG+ VLL +D++ RF +A E+ LG G P++ T + + ER T+
Sbjct: 259 EAYR-AEGRQVLLILDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTE 317
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
G+IT++ +V + D + DP + +D VL+R +AE G YPA+D L
Sbjct: 318 DGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVL 368
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 91.9 bits (218), Expect = 1e-17
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Frame = +3
Query: 18 LINNVAKAHGGFSVFAG-VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ +A+ V G VGER RE + + E +G ++ +V + P
Sbjct: 191 LLGMIARGSAADVVVIGLVGERGREVRE-FLEKDLGAE-----GLARSVVVVATSDSPAP 244
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
R R A T +AE +RD +G++VLL +D++ RF A E+ +G P+ GY P++
Sbjct: 245 LRLRAAFTATAIAESYRD-QGKNVLLLMDSVTRFAMAQREIGLAIGEPPATRGYTPSVFA 303
Query: 375 DMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPA 554
+ + ER + G+IT++ V V DD+ +P LD VLSRA+A YPA
Sbjct: 304 LLPRLLERAGAGETGAITALYTVLVEGDDMNEPIADAVRGILDGHLVLSRALAHANHYPA 363
Query: 555 VDPLD 569
+D L+
Sbjct: 364 IDVLE 368
>UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 945
Score = 91.5 bits (217), Expect = 1e-17
Identities = 71/195 (36%), Positives = 101/195 (51%), Gaps = 6/195 (3%)
Frame = -2
Query: 569 VQRVDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFL 390
V+R+DG V L + R VQ+ E G V QV+G DV LH D A GD L
Sbjct: 218 VERIDGRVDALLGNRARQRRGRVQVGEGGGGRRVGQVVGRDVDRLHRGDRALGRRGDALL 277
Query: 389 HITHVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCES 210
HV G+ L+ +Q R L GL E+ED++++ Q++L+ LV+E+L + E
Sbjct: 278 QGAHVGGERRLIAHRRGDAAEQRRDLGAGLGEAEDVVHEEQHVLA-LVAEVLGDGEAGER 336
Query: 209 NPSSGTWRFVHLPVNQ---GDLGSFIVVCNNASDF---HFMVEIVPLARPLPYAGKNRES 48
+ +G VHL V+Q G LG V+ D H +VEIV LA L AG++R +
Sbjct: 337 DARAGAGGLVHLAVDQRALGALGRAAVLLGVLVDVGLDHLVVEIVTLAGALADAGEDRVA 396
Query: 47 TVSFRHIVYQFHDEH 3
V+ +V Q HD+H
Sbjct: 397 RVNLGDVVDQLHDQH 411
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 91.1 bits (216), Expect = 2e-17
Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ +AK +V A VGER RE + + E +G + K S V V ++P
Sbjct: 176 LMGMIAKQTEADLNVIALVGERGREVRE-FIEKDLG---KEGLKRSIV--VVATSDQPAL 229
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
R + A T +AE+FRDK GQ+V+ +D++ R A E+ G P+ GY P++
Sbjct: 230 MRLKAAYTATAIAEYFRDK-GQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFA 288
Query: 375 DMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPA 554
+ + ER + G+IT+ V V DD+ +P T LD VL RA+A G +PA
Sbjct: 289 ILPRLLERTGANEHGTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPA 348
Query: 555 VDPL 566
V+ L
Sbjct: 349 VNVL 352
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 90.6 bits (215), Expect = 2e-17
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER+RE +D + E K+ D K S V V + PP R R A+ +AE FR
Sbjct: 197 IGERSREVSD-FVETKLP---PDVRKKSVVVAV--PADHPPLLRLRAAMRATAIAEAFR- 249
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA--GS 422
EG+ VLL ID++ R A E+ LG P+ GY P++ + ++ ER KA GS
Sbjct: 250 AEGKKVLLLIDSLTRVAHAQREIGLTLGEPPTMKGYPPSVFALIPSLCERAGIDKATGGS 309
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+T++ V D+ DP + A +D +LSR +AE GVYPA+D
Sbjct: 310 VTALYTVLADGGDIDDPVVDSARAIVDGHIILSRQLAEQGVYPAID 355
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 89.8 bits (213), Expect = 4e-17
Identities = 60/172 (34%), Positives = 88/172 (51%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V +GER RE D + E +G ++ +V +P R + A +A
Sbjct: 192 NVIGLIGERGREVLD-FIETDLG-----PEGLARSVVVVATSEQPALVRLKGAFVACAVA 245
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+FRD +G+DVLL +D+I RF A EV +G P+ GY P++ + + ER +
Sbjct: 246 EYFRD-QGRDVLLMMDSITRFAMAQREVGLAIGEPPATKGYTPSVFALLPRLLERAGMSS 304
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
AGSIT+ V V DDL +P LD VLSR++A +PAVD L+
Sbjct: 305 AGSITAFFTVLVDGDDLNEPISDAVRGILDGHIVLSRSLAASNHFPAVDVLN 356
>UniRef50_UPI00015B4CD4 Cluster: PREDICTED: similar to
ENSANGP00000024697; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000024697 - Nasonia
vitripennis
Length = 1018
Score = 89.4 bits (212), Expect = 5e-17
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTS---KVSLVYGQMNEPPGARARVALTGLT 227
V+AG GER E +L + V DD + S + +LV N P AR TGL+
Sbjct: 671 VYAGCGERGNEMAELLRDFGRLEVQVDDVRESIMKRTTLVANTSNMPVAAREASVYTGLS 730
Query: 228 LAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITT 407
LAE+FRD +G +V L D+ R+ +A E+ A L +P+ GY L + + ER
Sbjct: 731 LAEYFRD-QGYNVALMADSTSRWAEALREIGARLAEMPAEAGYPAYLGARLASFYERAGR 789
Query: 408 TKA-------GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
+ GS++ + AV PA D +DP T + A L + +AE +PAVD L
Sbjct: 790 VRCLGNPRREGSVSIIGAVSPPAGDFSDPVTNGTLGVVQAFWALDKRLAESKHFPAVDWL 849
Query: 567 DFY 575
Y
Sbjct: 850 KSY 852
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 89.4 bits (212), Expect = 5e-17
Identities = 57/171 (33%), Positives = 88/171 (51%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A VGER RE N+ H+ +G + K +V + P R+R A +A
Sbjct: 202 NVIALVGERGREVNEFIHD-NLG-----EEGLKKSIIVVATSDRPALERSRAAWVATAIA 255
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+FRD+ G+ V+L +D++ RF +A +V +G P+ G+ P++ + M + ER
Sbjct: 256 EYFRDR-GKRVMLLVDSVTRFARALRDVGLAIGEPPARRGFPPSVFSQMPRLFERAGNND 314
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT+ V + +D DP + LD VLSR +A YPA+D L
Sbjct: 315 KGSITAFYTVLMEGEDGDDPVAEEVRSILDGHIVLSRKLAAAYHYPAIDVL 365
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 89.0 bits (211), Expect = 7e-17
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ +AK +V A +GER RE ++ + +G +D K S V V +EP
Sbjct: 152 LLGMIAKQCDAEVNVIALIGERGREVSEFIQD-NLG---SDGLKKSVV--VAATADEPAL 205
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
R A +AE+F+DK G+ V+L++D+I R A E+ +G P++ GY P+ +
Sbjct: 206 VRVHAAFVATAIAEYFKDK-GKHVMLYMDSITRLATAQREIGLAIGEPPTSRGYTPSTFS 264
Query: 375 DMGNMQERITTTKAG-SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYP 551
+ + ER K+G SI+++ V V DD +P T + LD +L R +A G++P
Sbjct: 265 LLPRLTERAGIFKSGGSISALYTVLVEGDDFNEPVSDTVRSILDGHIMLKRQLAHQGIFP 324
Query: 552 AVD 560
A+D
Sbjct: 325 AID 327
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 88.2 bits (209), Expect = 1e-16
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Frame = +3
Query: 54 SVFAGVGERTREGND-LYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTL 230
SV A +GER RE + L +++ G+ + +V +EPP R R A +
Sbjct: 186 SVIALIGERGREVREFLENDLGPAGL-------RRSIVVVATSDEPPVVRLRAAFVATRI 238
Query: 231 AEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTT 410
AE FRD G+ V+L +D++ R A E+ G P+ G+ P++ + + ER T+
Sbjct: 239 AEWFRDS-GRHVVLMMDSLTRVALAQREIGLSAGEPPATRGFPPSVFALLPRLLERAGTS 297
Query: 411 KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
GSIT + V V DDL DP + + LD VLSR +A G +P++D L+
Sbjct: 298 PEGSITGLYTVLVEGDDLQDPIGDSARSILDGHVVLSRDLATSGHFPSIDVLE 350
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 87.8 bits (208), Expect = 2e-16
Identities = 60/168 (35%), Positives = 81/168 (48%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A VGER RE + + + +G K S V V ++P R A T +AE
Sbjct: 200 VIAMVGERGREVQE-FMQRALGAA---GLKRSVV--VVATSDKPAAQRLSAAWTATAIAE 253
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
FRD EG VLL +D++ RF A E+ G P+ GY P++ + + ER T
Sbjct: 254 KFRD-EGHRVLLLVDSVTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAGRTTK 312
Query: 417 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSIT+ V V DD +P T LD VL+R +A G YP +D
Sbjct: 313 GSITAFYTVLVEGDDNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPID 360
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 87.8 bits (208), Expect = 2e-16
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER RE D + + +G ++ LV +EPP R + A T + +AEHFRD
Sbjct: 180 IGERGREVQD-FIQADLG-----PEGLARAVLVVATGDEPPLMRRQAAWTAMAVAEHFRD 233
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI--TTTKAGS 422
+ G+ VLL +D+I RF A E+ G P++ GY PT+ ++ + ER G
Sbjct: 234 R-GKQVLLLLDSITRFATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERAGPGCDGQGD 292
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
IT++ V V D+ +P + D +L R IAE G YPA+D
Sbjct: 293 ITALFTVLVEGSDMEEPVADSVRGITDGHVILDRRIAERGRYPAID 338
>UniRef50_Q1IR49 Cluster: ATPase FliI/YscN; n=1; Acidobacteria
bacterium Ellin345|Rep: ATPase FliI/YscN - Acidobacteria
bacterium (strain Ellin345)
Length = 437
Score = 87.8 bits (208), Expect = 2e-16
Identities = 56/172 (32%), Positives = 84/172 (48%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A +GER RE + E +G + + ++ ++ P R R A+ +A
Sbjct: 188 TVLALIGERGREVREFVEE-SIG-----EEGMQRAVVIVSTSDQSPLLRLRAAMAATAVA 241
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
EHF EG+ VLL +D++ RF A E+ G P+A GY P++ T + + ER +
Sbjct: 242 EHFA-AEGKHVLLVLDSLTRFGMAQREIGLAAGEPPTAKGYTPSVFTLLARLVERAGNFE 300
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
GSIT V + DDL DP + LD VL R +A G YP + L+
Sbjct: 301 RGSITGFYTVLMEGDDLQDPLVDAVRSLLDGHIVLDRKLASDGHYPPIQILE 352
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 85.8 bits (203), Expect = 7e-16
Identities = 58/164 (35%), Positives = 86/164 (52%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
VGER RE + + E +G + K K +V + P R +AE++R
Sbjct: 203 VGERGREVRE-FVEDSLG---PEGLK--KAVVVATPADTSPLMRVAGCWRATAIAEYYR- 255
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSIT 428
+G +VLL +D++ RF QA E+ G P + GY P++ + M N+ ER +GSIT
Sbjct: 256 AQGLNVLLLVDSLTRFAQAQREIGLAAGEPPVSRGYTPSVFSLMPNLIERAGNLGSGSIT 315
Query: 429 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+V V DDL DP + A LD VLSR +A+ G++PA+D
Sbjct: 316 AVYTVLTEGDDLQDPIADSARAILDGHVVLSRKMADSGLFPAID 359
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 85.8 bits (203), Expect = 7e-16
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Frame = +3
Query: 57 VFAGVGERTREGND-LYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
VF +GER RE + L HE+ D+ + LV + RAR A T +A
Sbjct: 198 VFGLIGERGRELREFLDHEL-------DETLRRRSVLVCATSDRSSMERARAAFTATAIA 250
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E FR + GQ VLL +D++ RF +A E+ G G P++ T + + ER ++
Sbjct: 251 EAFRAR-GQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSE 309
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSIT++ V + D + DP + LD VLSR +AE G YPA+D
Sbjct: 310 NGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358
>UniRef50_O07025 Cluster: Flagellum-specific ATP synthase; n=24;
Epsilonproteobacteria|Rep: Flagellum-specific ATP
synthase - Helicobacter pylori (Campylobacter pylori)
Length = 434
Score = 85.8 bits (203), Expect = 7e-16
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A +GER RE + + G + S LV ++ P R A +++AE
Sbjct: 187 VIALIGERGREIPEFIEKNLKGDL-------SSCVLVVATSDDSPLMRKYGAFCAMSVAE 239
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK- 413
+F++ +G DVL +D++ RF A E+ LG P++ GY P+ + + + ER +
Sbjct: 240 YFKN-QGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEEN 298
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
GSIT+ +V V DDL+DP T + LD VLSR + + G+YP ++ L+
Sbjct: 299 KGSITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPINILN 350
>UniRef50_Q8VNS1 Cluster: EscN protein; n=11;
Enterobacteriaceae|Rep: EscN protein - Escherichia coli
Length = 446
Score = 84.2 bits (199), Expect = 2e-15
Identities = 53/168 (31%), Positives = 85/168 (50%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A +GER RE N+ + SK LV + P R + A T T+AE
Sbjct: 200 VLALIGERGREVNEFL-------ALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAE 252
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
FRD +G++VLL +D++ R+ +A +V G G+ P++ + + + ER
Sbjct: 253 FFRD-QGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK 311
Query: 417 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSIT++ V + +D++ DP + LD VL+R +AE +PA+D
Sbjct: 312 GSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAID 359
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 83.4 bits (197), Expect = 4e-15
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A VGER RE N+ + E+ +G + K S V + + P + AL ++A
Sbjct: 197 NVIALVGERGREVNE-FIEIDLG---KEGLKKSVV--LAATSDAPKMEQVNCALLATSIA 250
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+FRD +G+ V L +D++ RF QA E+SA P G+ ++ + + + ER T+K
Sbjct: 251 EYFRD-QGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTSK 309
Query: 414 AG-SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+G +IT V AD++ DP ++D +L+R +AE YPA+D
Sbjct: 310 SGGTITGFYTVLTEADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAID 359
>UniRef50_Q5LWX0 Cluster: H+-transporting two-sector ATPase,
flagellum-specific; n=17; Rhodobacteraceae|Rep:
H+-transporting two-sector ATPase, flagellum-specific -
Silicibacter pomeroyi
Length = 445
Score = 83.4 bits (197), Expect = 4e-15
Identities = 60/170 (35%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A +GER RE N+ V + + V +V ++ R R A +T+AE
Sbjct: 190 VVALIGERGREVNEF-----VAKALGPEGLARSV-IVAATSDQSALVRRRCAWAAMTVAE 243
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERIT--TT 410
RD EG +VL D+I RF +A E+SA +G P+ GY P++ + + ER T
Sbjct: 244 SLRD-EGLNVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPGTE 302
Query: 411 KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
K G IT V +V V D+ +P LD VL+R IAE G +PA+D
Sbjct: 303 KQGDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPAID 352
>UniRef50_Q0EZL2 Cluster: Flagellum-specific ATP synthase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Flagellum-specific
ATP synthase - Mariprofundus ferrooxydans PV-1
Length = 471
Score = 83.4 bits (197), Expect = 4e-15
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A VGER+RE + + + +G ++ + S V + M PP R R A T+A
Sbjct: 194 NVIALVGERSREVRE-FLDQALG---SEALQHSVVIVATSDM--PPVLRVRAAHMATTIA 247
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI--TT 407
E FR+ +G+ VLL +D++ R QA E+ +LG P++ GY P+ + + + ER T
Sbjct: 248 EAFRE-QGKRVLLLMDSLTRVAQAQREIGLMLGEPPASKGYTPSCFSILAELLERSGPGT 306
Query: 408 TKAGSITSVQAVYVPADDL-TDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
+ G I++ V V DD+ DP + + LD +L R +AE G +PA++ L
Sbjct: 307 AQGGDISAFYTVLVEGDDMRADPIADSAMSVLDGHILLDRKLAEQGHFPAINVL 360
>UniRef50_A6FKZ2 Cluster: Flagellum-specific ATP synthase; n=1;
Roseobacter sp. AzwK-3b|Rep: Flagellum-specific ATP
synthase - Roseobacter sp. AzwK-3b
Length = 474
Score = 83.4 bits (197), Expect = 4e-15
Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
VFA +GER RE L H ++ G + + V +V ++ P AR R A T + +AE
Sbjct: 190 VFALIGERGRE---LRHFIETG--LGPEGMLRSV-VVAATSDQSPLARRRCAWTAMAVAE 243
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
+FRD G+ VLL D+I RF +A EV+ G +P+ G+ + + + ++ ER
Sbjct: 244 YFRDA-GKQVLLMFDSITRFAEAHREVAIAAGELPTMRGFPASTSHMIMSLCERAGPGAQ 302
Query: 417 G--SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
G IT++ +V V DL +P LD VL R IAE G YPA+D L
Sbjct: 303 GCADITALFSVLVAGSDLDEPVADILRGVLDGHVVLDRQIAERGRYPAIDLL 354
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 83.0 bits (196), Expect = 5e-15
Identities = 56/171 (32%), Positives = 85/171 (49%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A +GER RE + + + + K S V V ++PP R R A T+A
Sbjct: 188 NVIALIGERGRELREFIEK----DLQEEGLKKSVV--VVATSDQPPLVRMRGAYIATTIA 241
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+F+ +G+ VLL +D+ RF A EV +G P+ GY P++ + + ER +
Sbjct: 242 EYFQ-AQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGSFL 300
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT + V V DD +P + LD VL+R +A +YP +D L
Sbjct: 301 DGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLNRELAARAIYPPLDIL 351
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 83.0 bits (196), Expect = 5e-15
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332
K+ +V + P R R A +AEHFR EG+ VLL +D++ R A EV LG
Sbjct: 217 KLCMVAVPADRSPLLRLRAARRATAIAEHFRS-EGKQVLLIMDSLTRVAHAQREVGLALG 275
Query: 333 RIPSAVGYQPTLATDMGNMQERI--TTTKAGSITSVQAVYVPADDLT-DPAPATTFAHLD 503
P+A GY P++ + + + ER G+IT++ V DD T DP T A LD
Sbjct: 276 EQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLADGDDTTNDPVVDTARAILD 335
Query: 504 ATTVLSRAIAELGVYPAVD 560
VLSR ++G+YPA+D
Sbjct: 336 GHFVLSRRQTQMGLYPAID 354
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 83.0 bits (196), Expect = 5e-15
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A +GER RE + + E +G K +V ++PP A+ R + A
Sbjct: 171 NVIALIGERGREVRE-FIEDNLG-----KEGLEKSIVVVATSDQPPLAKLRAVHVAMAYA 224
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI-TTT 410
+F K+G+DVL +D++ R A E+ L+G P++ GY P++ T + + E+ T
Sbjct: 225 SYF-SKKGKDVLFLVDSLTRLAMAQREIGLLVGEPPTSKGYTPSVFTLLPKIIEQAGTFH 283
Query: 411 KAGSITSVQAVYVPADDL-TDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT + V ++L +DP LD VLS+ +A+ V+PAVDPL
Sbjct: 284 NQGSITGIYTVLFEGEELSSDPIADAAVGFLDGHVVLSKEMAQKRVFPAVDPL 336
>UniRef50_A4M4Z6 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 458
Score = 83.0 bits (196), Expect = 5e-15
Identities = 62/189 (32%), Positives = 93/189 (49%)
Frame = -2
Query: 569 VQRVDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFL 390
V+RV V L D + VQ+ E R V QV+G +V L DG GD L
Sbjct: 98 VERVHCRVDAELGDLTGENGGRVQVGEGGSRSRVGQVVGRNVDRLDRGDGTLVGRGDALL 157
Query: 389 HITHVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCES 210
+ H+ Q LV D G ++ L L E+ED++++ +++L+ LV+E+LC + ES
Sbjct: 158 QLAHLGCQGRLVTDGGGDTAEECGNLGTRLGEAEDVVDEEEHVLAFLVAEVLCDGERGES 217
Query: 209 NPSSGTWRFVHLPVNQGDLGSFIVVCNNASDFHFMVEIVPLARPLPYAGKNRESTVSFRH 30
+ + VHL V++ L NA H E+VP A L AG++ E+ V
Sbjct: 218 DAGTCPRGLVHLAVHECRL------VENAGFLHLHPEVVPFAGTLADAGEDGEAAVLLSD 271
Query: 29 IVYQFHDEH 3
+V Q HDE+
Sbjct: 272 VVDQLHDEN 280
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 83.0 bits (196), Expect = 5e-15
Identities = 53/166 (31%), Positives = 85/166 (51%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER RE + ++ +K K LV+ + P R A T+AE+FRD
Sbjct: 186 IGERGREVTEFVDMLRAS------HKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRD 239
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSIT 428
+G+ V+LFID++ R+ +A +V+ G P+ GY ++ ++ + ER T GSIT
Sbjct: 240 -QGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLERPGATSEGSIT 298
Query: 429 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
+ V + +++ DP + LD LSR +A G YPA+D L
Sbjct: 299 AFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVL 344
>UniRef50_Q8KKY7 Cluster: Type III secretion system ATP synthase
protein; n=2; Proteobacteria|Rep: Type III secretion
system ATP synthase protein - Rhizobium etli (strain CFN
42 / ATCC 51251)
Length = 439
Score = 81.8 bits (193), Expect = 1e-14
Identities = 58/179 (32%), Positives = 86/179 (48%)
Frame = +3
Query: 30 VAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARV 209
VA V A VGER RE + + GV S V+LV + P R +
Sbjct: 183 VANNKADVIVCALVGERGREVGEFVADNMPEGV------ASNVALVLATSDRPALERFKA 236
Query: 210 ALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNM 389
+T +AE+FR+ +G+ VLL ID++ R +A EV G P G+ P++ + +
Sbjct: 237 VMTATAIAEYFRE-QGKHVLLVIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQI 295
Query: 390 QERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
ER + G++T+ V V ++ DP T + LD VLS IA G +PA+D L
Sbjct: 296 FERAGNSANGTMTAFYTVLVEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVL 354
>UniRef50_Q12T73 Cluster: ATPase FliI/YscN; n=1; Shewanella
denitrificans OS217|Rep: ATPase FliI/YscN - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 436
Score = 81.8 bits (193), Expect = 1e-14
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Frame = +3
Query: 9 IMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEP 188
++ ++++ V VGER RE + V G + + S+ LV E
Sbjct: 171 LLAMMSDSCAQQNAVIVIVLVGERGREVEEF-----VNGKMFKRLR-SRAVLVAATAEEM 224
Query: 189 PGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 368
P R GL LAE EG++V+ +D++ R A E+ +G P+A GY P++
Sbjct: 225 PVTRVLAVKYGLALAESL-SAEGKEVIFVVDSLTRVAMAQREIGLAIGEPPTAKGYTPSV 283
Query: 369 ATDMGNMQERITTTK-AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGV 545
+ + + ER + SIT++ +V V DD DP T A LD VL RA+AE G
Sbjct: 284 FSLLQRIVERCGAFRHRASITALFSVLVETDDFDDPIVDTLRAVLDGHIVLDRALAEQGH 343
Query: 546 YPAVDPL 566
+PA+D L
Sbjct: 344 FPAIDVL 350
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 81.8 bits (193), Expect = 1e-14
Identities = 58/171 (33%), Positives = 80/171 (46%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V A +GER RE + E ++G + K S V V P R R L +A
Sbjct: 187 TVIAMIGERNREVRG-FLENELG---PEGRKRSVV--VCATSERPAPLRVRACFVSLAIA 240
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+FRD +G +VLL +D++ R A E+ G PS GY P++ + + ER
Sbjct: 241 EYFRD-QGANVLLVMDSVTRLAMAQREIGLAAGEPPSQKGYTPSVFNLLPKVLERAGNFG 299
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT V V DD +P LD +LSR + G YPA+D L
Sbjct: 300 RGSITGFFTVLVEGDDFNEPICDAVRGILDGHFILSRDLGAQGHYPAIDIL 350
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 81.8 bits (193), Expect = 1e-14
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER RE D + ++ D + V ++ + P R + A +AE FRD
Sbjct: 209 IGERGREVKDF-----IENILGPDGRARSV-VIAAPADVSPLLRMQGAAYATRIAEDFRD 262
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTT--KAGS 422
+ GQ VLL +D++ R+ A E++ +G P+ GY P++ + + ER GS
Sbjct: 263 R-GQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 321
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
IT+ V DD DP + A LD VLSR +AE G YPA+D
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAID 367
>UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta
subunit; n=1; uncultured bacterium eBACred22E04|Rep:
Predicted F0F1-type ATP synthase beta subunit -
uncultured bacterium eBACred22E04
Length = 198
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLA +MG +QERI++TK GSITS+Q VYV D T P T HLDAT VLSR A LG
Sbjct: 39 TLAEEMGVLQERISSTKTGSITSIQTVYVSTDARTHPIATRTSTHLDATVVLSRNNAGLG 98
Query: 543 VYPAVDPLD 569
+ P+VD LD
Sbjct: 99 ISPSVDTLD 107
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 81.0 bits (191), Expect = 2e-14
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ +AK A +V + VGER RE D + ++G + K +V +E
Sbjct: 174 LLGMIAKNAKADINVISLVGERGREVKDFIRK-ELG-----EEGMRKSVVVVATSDESHL 227
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
+ R A ++AE+FRD +G +VLL +D++ RF A V + +P G + +
Sbjct: 228 MQLRAAKLATSIAEYFRD-QGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMES 285
Query: 375 DMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPA 554
M + ER T+ GSIT + V V DDL P P LD VL R +A L YPA
Sbjct: 286 YMKKLLERSGKTQKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPA 345
Query: 555 VDPLD 569
+ LD
Sbjct: 346 ISVLD 350
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 80.6 bits (190), Expect = 3e-14
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A +GER RE + E + + K +V ++ P + + A++ + A
Sbjct: 192 VLALIGERGREVKEFLEE------VLGEEGLKKSVVVVSTADQSPILKVKGAISAVVHAH 245
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
HF +G+DVLL +D+I R A E+ G P+ G+ P++ + + E K
Sbjct: 246 HFAS-QGKDVLLLMDSITRLALAQREIGLAAGEPPTLKGFTPSVFQLLTRIAESCGAFKK 304
Query: 417 GSITSVQAVYVPADDLT-DPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT + V V DD++ DP + LD +LSR A G++PAVDP+
Sbjct: 305 GSITGIFTVLVEGDDISLDPIADSLMGVLDGHIILSRKRAVRGLFPAVDPV 355
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 80.2 bits (189), Expect = 3e-14
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER RE E +G + ++ +V +E P R + ALT +AE+F+
Sbjct: 194 IGERGREVQQFIQE-DLG-----EEGMARAVVVVSTGDEAPLLRKQAALTTTAIAEYFKS 247
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA--GS 422
G+ VLL +D++ RF A E+ G P+ GY P++ +++ ++ ER A G
Sbjct: 248 T-GKQVLLLLDSVTRFAMAQREIGLARGEPPTLRGYPPSVFSELPHLLERAGPGMAAEGD 306
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
IT + V V DD+ +P +D VL R IAE G +PA+D
Sbjct: 307 ITGLYTVLVDGDDMNEPIADAVRGIVDGHLVLDRRIAEQGRFPAID 352
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 80.2 bits (189), Expect = 3e-14
Identities = 59/186 (31%), Positives = 93/186 (50%)
Frame = -2
Query: 569 VQRVDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFL 390
V+RVD V T SD R + CVQ++E R V QV+ DV+ L+ R+ A D L
Sbjct: 329 VERVDRRVDTQRSDVTRQNDGCVQVAEGGCRRRVGQVVRRDVHGLNRRNRALLGRRDALL 388
Query: 389 HITHVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCES 210
+ H Q L+ + +Q R+ G RE+ D++++ Q++ V+E+L Q +
Sbjct: 389 QLAHFFSQRRLIAHCRRHTAEQCRHFGTGQRETVDVVDEEQHV-EAFVTEVLGHRQAGQR 447
Query: 209 NPSSGTWRFVHLPVNQGDLGSFIVVCNNASDFHFMVEIVPLARPLPYAGKNRESTVSFRH 30
+ + R VHL V+Q DL N HF+VE+VP L +A ++ + V R
Sbjct: 448 DAQTVARRLVHLAVHQRDL------VENVRVLHFVVEVVPFTGTLAHAREHGVTAVFLRD 501
Query: 29 IVYQFH 12
+V + H
Sbjct: 502 VVDELH 507
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 79.0 bits (186), Expect = 8e-14
Identities = 52/171 (30%), Positives = 84/171 (49%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V +GER RE + + ++++ + V +V + P R R T+A
Sbjct: 184 NVLVLIGERGREVREF-----IDFTLSEETRKRCV-IVVATSDRPALERVRALFVATTIA 237
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E FRD G+ V+L D++ R+ +A E++ G + Y P + + + + ER +
Sbjct: 238 EFFRDN-GKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGE 296
Query: 414 AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GSIT+ V V DD+ +P + LD VLSR +AE G YPA+D L
Sbjct: 297 KGSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVL 347
>UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 444
Score = 79.0 bits (186), Expect = 8e-14
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Frame = +3
Query: 18 LINNVAKAHGGFSVFAG-VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L++ +AK +V G +GER RE + E + + +V +EP
Sbjct: 173 LLSMLAKEATCDAVVVGLIGERGREVREFVEET------LGEEGLRRAVVVVATSDEPAL 226
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
R + A L ++E RD++ Q+VL +D++ RF A E+ G P+ GY PT+ T
Sbjct: 227 TRRQAAYMTLAISEFMRDQD-QEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFT 285
Query: 375 DMGNMQERITT-------TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIA 533
++ + ER T A IT++ V V DD +P T LD V+ RAIA
Sbjct: 286 ELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPIADATRGILDGHIVMERAIA 345
Query: 534 ELGVYPAVDPL 566
E G +PA++ L
Sbjct: 346 ERGRFPAINVL 356
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 78.6 bits (185), Expect = 1e-13
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER RE + + E +G + K S V + ++ P R + ++AE++RD
Sbjct: 189 IGERNREVRE-FIEKNIGA---EGLKKSVV--IAAPADQSPLMRIQATELCHSVAEYYRD 242
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITT--TKAGS 422
K G +VLL +D++ R+ A EV+ LG +P+ GY P++ + + + ER AG+
Sbjct: 243 K-GANVLLLVDSLTRYAMAQREVAISLGELPAIKGYPPSVFSFIPPLLERSGNGHENAGT 301
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+T++ + D+ DP T A LD VLS+ +A+ G +PAVD
Sbjct: 302 MTAIYTILSEGDEDYDPVVDTAKAILDGHIVLSKELAQRGQFPAVD 347
>UniRef50_Q9F696 Cluster: Flagella-specific ATPase; n=16;
Alphaproteobacteria|Rep: Flagella-specific ATPase -
Bartonella bacilliformis
Length = 315
Score = 78.2 bits (184), Expect = 1e-13
Identities = 59/170 (34%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A GER RE D+ + T K KV V +E P R + T+AE
Sbjct: 66 VLALTGERGREVRDMLDD-------TLQDKLDKVVAVIATSDESPMMRRLAPIMATTIAE 118
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
+F G +VLL +D+I R+ A E++ P + G+ P + +++ + ER +
Sbjct: 119 YFSSL-GDNVLLVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGRK 177
Query: 417 G--SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
G SIT V AV V DD DP LD VL RAIA G +PAVD
Sbjct: 178 GKGSITGVYAVLVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVD 227
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 77.8 bits (183), Expect = 2e-13
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
VFA +G + E + GV+ KV + ++PP R + T L AE
Sbjct: 181 VFAAMGVTYSDARFFQEEFENSGVL------GKVVMYLNLADDPPIKRLLLPRTALACAE 234
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK- 413
+ ++ VL+ + ++ + +A EV+ G +PS GY L +D+ + ER K
Sbjct: 235 YLAFEQDLHVLVVMTDMTHYAEALREVATAKGDVPSRKGYPGYLYSDLAEIYERAGRIKN 294
Query: 414 -AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSIT V V +P+DD+T P P T + VLSR + G+YP V+
Sbjct: 295 RRGSITMVPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHHQGIYPPVN 344
>UniRef50_A6GN32 Cluster: Type III secretion protein; n=1;
Limnobacter sp. MED105|Rep: Type III secretion protein -
Limnobacter sp. MED105
Length = 461
Score = 77.0 bits (181), Expect = 3e-13
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
VF VGER RE + + ITD+ + K V + R R A T ++AE
Sbjct: 202 VFGLVGERGRELREFIEKE-----ITDEIR-KKSFFVCATSDRSAIERVRAAFTATSIAE 255
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
+ RD +G+ VLL +D++ R +A E+ + G + G+ P++ + + + ER T+
Sbjct: 256 YLRD-QGKSVLLVVDSLTRLARAQRELGLMAGEPATQAGFTPSVYSILPELIERSGRTEQ 314
Query: 417 GSITSVQAVYVPADDLTD-PAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
G IT+V V + + + D P + + LD VLS + E +PA+DPL
Sbjct: 315 GDITAVFTVLMEGERIEDDPIASEAKSLLDGHIVLSTKLVERSHFPAIDPL 365
>UniRef50_A2WHW2 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=3; Proteobacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Burkholderia dolosa AUO158
Length = 476
Score = 77.0 bits (181), Expect = 3e-13
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLY-HEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFR 245
+GER RE + H + G+ K +V +E P R +A HFR
Sbjct: 232 IGERGREVREFVEHALGPDGM-------RKAIVVVAPADESPLMRLMATELCHAIAAHFR 284
Query: 246 DKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK-AGS 422
D+ G +VLL +D++ R+ A E++ LG P+ GY P++ + + ER + +GS
Sbjct: 285 DR-GDNVLLLVDSLTRYAMAQRELALALGEPPATKGYPPSVFGMLPALVERAGNGEGSGS 343
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
++++ V DD DP T A LD +LSR +A G YPA+D
Sbjct: 344 MSAIYTVLAEGDDEQDPVVDTARAILDGHIMLSRELAAQGHYPAID 389
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 76.2 bits (179), Expect = 5e-13
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Frame = +3
Query: 33 AKAHGG--FSV-FAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARA 203
A+ GG F+V FA +G RE + + GV+ + + + +PP R
Sbjct: 177 ARVRGGEPFAVVFAAMGSPFREYHAFLEAFRAAGVL------DRTVVFLNRAEDPPIERL 230
Query: 204 RVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 383
LT AEH G VL+ + ++ + +A EV+ +P GY + TD+
Sbjct: 231 MTPRCALTCAEHLAFTHGLHVLVVLTDVTSYCEALREVALAREEVPGRRGYPGYMYTDLA 290
Query: 384 NMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAV 557
+ ER + GS+T + + +P DDLT P P T + VLSR + GVYP +
Sbjct: 291 TIFERAGRVRGRPGSLTQLPVLTMPDDDLTHPIPDLTGYITEGQIVLSRDLDRRGVYPPI 350
Query: 558 DPL 566
D L
Sbjct: 351 DVL 353
>UniRef50_Q5JIR3 Cluster: V-type ATP synthase alpha chain; n=12;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Pyrococcus kodakaraensis (Thermococcus kodakaraensis)
Length = 585
Score = 76.2 bits (179), Expect = 5e-13
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
V+ G GER E D+ E K+ T + L+ N P AR TG+T+A
Sbjct: 254 VYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 313
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI---- 401
E+FRD +G DV L D+ R+ +A E+S L +P GY LA+ + ER
Sbjct: 314 EYFRD-QGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVI 372
Query: 402 ---TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
+ + GS++ + AV P D ++P T + L +A +PA++ L
Sbjct: 373 TLGSDERVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRS 432
Query: 573 Y 575
Y
Sbjct: 433 Y 433
>UniRef50_P85088 Cluster: ATP synthase subunit beta, mitochondrial;
n=28; cellular organisms|Rep: ATP synthase subunit beta,
mitochondrial - Vitis sp. (Grape)
Length = 62
Score = 75.8 bits (178), Expect = 7e-13
Identities = 43/65 (66%), Positives = 46/65 (70%)
Frame = +3
Query: 204 RVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 383
RV LTGLT+AEHFR FTQA SEVSALLGRIPSAVGYQPTLATD+G
Sbjct: 14 RVGLTGLTVAEHFR----------------FTQANSEVSALLGRIPSAVGYQPTLATDLG 57
Query: 384 NMQER 398
+QER
Sbjct: 58 GLQER 62
>UniRef50_Q9EZ19 Cluster: SpaL/InvC; n=4; Enterobacteriaceae|Rep:
SpaL/InvC - Sodalis glossinidius
Length = 437
Score = 75.4 bits (177), Expect = 9e-13
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+GER RE + ++ + K LVY + R AL T+AE+FRD
Sbjct: 192 IGERGREVTEFVETLR------HSPRRHKCVLVYATSDYASLERCNAALVATTVAEYFRD 245
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSIT 428
+G+ V+LF+D++ RF +A +V+ G P+ GY ++ + + ER + +GSIT
Sbjct: 246 -QGRRVVLFLDSLTRFARALRDVALAAGEAPARRGYPASVFDALPRVLERPGNSLSGSIT 304
Query: 429 SVQAVYVPADDLTDP-AP-ATTFAHLDATTVLSRAIAELGVYPAVDPL 566
+ V + DD DP AP D LSR ++ YPA+D L
Sbjct: 305 AFYTVLLEGDDEPDPDAPDENPLRFSDGHIYLSRKLSAASHYPAIDIL 352
>UniRef50_A7BUC4 Cluster: V-type ATPase subunit A; n=1; Beggiatoa
sp. PS|Rep: V-type ATPase subunit A - Beggiatoa sp. PS
Length = 595
Score = 75.4 bits (177), Expect = 9e-13
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYK----TSKVSLVYGQMNEPPGARARVALTGL 224
++ G GER GN+L ++ +TD + + L+ N P AR G+
Sbjct: 259 IYVGCGER---GNELVDILETFPELTDPHTGRSLMERTLLIANTSNMPVVAREASIYVGV 315
Query: 225 TLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE--- 395
T+AE++RD G DV++ D+ R+ +A EV LG++P GY LA+ + E
Sbjct: 316 TIAEYYRDL-GYDVVMVADSTSRWAEALREVGGRLGQMPVEEGYPAYLASRLAAFYERAG 374
Query: 396 RITT--TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
R+TT + S+T + AV P D ++P + T + LS+ +A+ YP++D
Sbjct: 375 RVTTLGNQKASVTLIGAVSPPGGDFSEPVTSHTKEIVQTFWALSKELADARHYPSID 431
>UniRef50_O57728 Cluster: V-type ATP synthase alpha chain (EC
3.6.3.14) (V-type ATPase subunit A) [Contains:
Endonuclease PI-Pho2 (EC 3.1.-.-) (Pho atpA intein) (Pho
VMA intein)]; n=1; Pyrococcus horikoshii|Rep: V-type ATP
synthase alpha chain (EC 3.6.3.14) (V-type ATPase subunit
A) [Contains: Endonuclease PI-Pho2 (EC 3.1.-.-) (Pho atpA
intein) (Pho VMA intein)] - Pyrococcus horikoshii
Length = 964
Score = 75.4 bits (177), Expect = 9e-13
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
++ G GER E D+ E K+ T + L+ N P AR TG+T+A
Sbjct: 633 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 692
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE---RIT 404
E+FRD G DV L D+ R+ +A E+S L +P GY LA+ + E R+
Sbjct: 693 EYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVV 751
Query: 405 TT----KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
T + GS++ + AV P D ++P T + L +A +PA++ L
Sbjct: 752 TLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTS 811
Query: 573 Y 575
Y
Sbjct: 812 Y 812
>UniRef50_Q9UXU7 Cluster: V-type ATP synthase alpha chain (EC
3.6.3.14) (V-type ATPase subunit A) [Contains: Pab atpA
intein (Pab VMA intein)]; n=3; cellular organisms|Rep:
V-type ATP synthase alpha chain (EC 3.6.3.14) (V-type
ATPase subunit A) [Contains: Pab atpA intein (Pab VMA
intein)] - Pyrococcus abyssi
Length = 1017
Score = 75.4 bits (177), Expect = 9e-13
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
++ G GER E D+ E K+ T + L+ N P AR TG+T+A
Sbjct: 686 IYIGCGERGNEMTDVLEEFPKLKDPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIA 745
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE---RIT 404
E+FRD G DV L D+ R+ +A E+S L +P GY LA+ + E R+
Sbjct: 746 EYFRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVV 804
Query: 405 TT----KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
T + GS++ + AV P D ++P T + L +A +PA++ L
Sbjct: 805 TLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTS 864
Query: 573 Y 575
Y
Sbjct: 865 Y 865
>UniRef50_Q3J9F3 Cluster: Sodium-transporting two-sector ATPase;
n=1; Nitrosococcus oceani ATCC 19707|Rep:
Sodium-transporting two-sector ATPase - Nitrosococcus
oceani (strain ATCC 19707 / NCIMB 11848)
Length = 591
Score = 73.7 bits (173), Expect = 3e-12
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYK----TSKVSLVYGQMNEPPGARARVALTGL 224
++ G GER GN+L + +TD + + LV N P AR G+
Sbjct: 255 IYVGCGER---GNELVEVLDSFPELTDPHTGRSLMERTLLVANTSNMPVVAREASLYVGV 311
Query: 225 TLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE--- 395
TL E++RD +G DV++ D+ R+ +A EV+ LG++P GY LA+ + E
Sbjct: 312 TLGEYYRD-QGYDVVIVADSTSRWAEALREVAGRLGQMPVEEGYPAYLASRLAAFYERAG 370
Query: 396 RITTT--KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAV 557
R+ T GS+T + AV P D ++P + T + LS+ +A+ YPAV
Sbjct: 371 RVQTLGGSVGSVTLIGAVSPPGGDFSEPVTSHTKEIVRTFWALSKDLADARHYPAV 426
>UniRef50_Q74MJ7 Cluster: V-type ATP synthase alpha chain; n=1;
Nanoarchaeum equitans|Rep: V-type ATP synthase alpha
chain - Nanoarchaeum equitans
Length = 570
Score = 73.7 bits (173), Expect = 3e-12
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPP 191
L +AK A ++ G GER E ++ E K+ T + L+ N P
Sbjct: 232 LNQQIAKWADSDIVIYIGCGERGNEMTEVLEEFPKLKDPKTGKPLMYRTILIANTSNMPI 291
Query: 192 GARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLA 371
AR G T+ E+FRD +G V++ D+ R+ +A E+S+ LG IPS GY L
Sbjct: 292 AAREASIYLGATIGEYFRD-QGYSVVVNADSTSRWAEALREISSRLGEIPSEEGYPAYLL 350
Query: 372 TDMGNMQERITTTKA-----GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAE 536
+ ER + GS+T + AV P D ++P T + A L +A
Sbjct: 351 RKLAEFYERSGRVRTLNDLEGSLTIIGAVSPPGGDFSEPVTQNTLRLVGALWALDSKLAY 410
Query: 537 LGVYPAVDPLDFY 575
YPA++ L Y
Sbjct: 411 KRHYPAINYLISY 423
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 73.3 bits (172), Expect = 4e-12
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
LI+ + K A + A +GER RE + + E +G + + +V +
Sbjct: 190 LISQIVKGAAADVVIVALIGERGREVRE-FVERHLG-----EEGLRRAIVVVETSDRSAT 243
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
RA+ A LAE+FR+ +G V L +D++ RF +A E+ G P+ G+ P++
Sbjct: 244 ERAQCAPMATALAEYFRE-QGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFA 302
Query: 375 DMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPA 554
+ + ER + GSIT+ V V D DP + LD VLSRA+A +PA
Sbjct: 303 ALPGLLERAGLGERGSITAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPA 362
Query: 555 VDPL 566
+D L
Sbjct: 363 IDVL 366
>UniRef50_P38606 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=209; cellular organisms|Rep: Vacuolar ATP synthase
catalytic subunit A - Homo sapiens (Human)
Length = 617
Score = 73.3 bits (172), Expect = 4e-12
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHE-----MKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTG 221
++ G GER E +++ + M+V G + K + +LV N P AR TG
Sbjct: 273 IYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMK--RTALVANTSNMPVAAREASIYTG 330
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI 401
+TL+E+FRD G V + D+ R+ +A E+S L +P+ GY L + + ER
Sbjct: 331 ITLSEYFRDM-GYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERA 389
Query: 402 TTTKA-------GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
K GS++ V AV P D +DP + T + L + +A+ +P+V+
Sbjct: 390 GRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVN 449
Query: 561 PLDFY 575
L Y
Sbjct: 450 WLISY 454
>UniRef50_A6QSP8 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=1; Ajellomyces capsulatus NAm1|Rep: Vacuolar ATP
synthase catalytic subunit A - Ajellomyces capsulatus
NAm1
Length = 636
Score = 72.9 bits (171), Expect = 5e-12
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKT---SKVSLVYGQMNEPPGARARVALTGLT 227
V+ G GER E ++ + + D K + L+ N P AR TG+T
Sbjct: 297 VYVGCGERGNEMAEVLMDFPELSINIDGRKEPIMKRTCLIANTSNMPVAAREASIYTGIT 356
Query: 228 LAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI-- 401
+AE+FRD +G++V + D+ R+ +A E+S LG +P+ G+ L + + ER
Sbjct: 357 VAEYFRD-QGKNVAMMADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGL 415
Query: 402 -----TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+ + GS++ V AV P D +DP ++T + L + +A+ +P+++
Sbjct: 416 SIALGSPERKGSVSIVGAVSPPGGDFSDPVTSSTLGIVQVFWGLDKKLAQRKHFPSIN 473
>UniRef50_Q9HNE3 Cluster: V-type ATP synthase alpha chain; n=21;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 585
Score = 72.9 bits (171), Expect = 5e-12
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
V+ G GER E ++ + ++ T + ++ +L+ N P AR TG+T+A
Sbjct: 258 VYIGCGERGNEMTEVIEDFPELPDPQTGNPLMARTTLIANTSNMPVAARESCIYTGITIA 317
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI---- 401
E++RD G DV L D+ R+ +A E+S+ L +P GY LA + ER
Sbjct: 318 EYYRDM-GYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFE 376
Query: 402 -TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSI+ + AV P D ++P T + L +AE +PA++
Sbjct: 377 NFNGTEGSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAIN 430
>UniRef50_Q8ZXR2 Cluster: V-type ATP synthase beta chain; n=5;
Archaea|Rep: V-type ATP synthase beta chain -
Pyrobaculum aerophilum
Length = 467
Score = 72.5 bits (170), Expect = 7e-12
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
VF GVG +T E E + G + + V ++P R GLT+ E
Sbjct: 183 VFVGVGIKTEEALFFMDEFRKTGALR------RAVAVLNLASDPVAERILAPRVGLTIGE 236
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
+ + G VL+ I ++ + + E+S+ G +P GY + TD+ + ER +
Sbjct: 237 YLAWQLGYHVLVVITDMTNYCEGLRELSSGRGELPGRRGYPGYMYTDLATIYERAGRARG 296
Query: 417 --GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GS+T + +P DD+T P P T + VLSRA+ G+YP D
Sbjct: 297 RRGSVTQFPILTMPHDDITHPIPDLTGYITEGQLVLSRAMWGKGIYPPFD 346
>UniRef50_Q9RWG8 Cluster: V-type ATP synthase alpha chain; n=61;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Deinococcus radiodurans
Length = 582
Score = 71.7 bits (168), Expect = 1e-11
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 7/185 (3%)
Frame = +3
Query: 27 NVAK-AHGGFSVFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGAR 200
+VAK + V+ G GER E D+ E ++ T + L+ N P AR
Sbjct: 243 SVAKYGNADIVVYVGCGERGNEMTDVLVEFPELEDPKTGGPLMHRTILIANTSNMPVAAR 302
Query: 201 ARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 380
TG+TLAE+FRD +G V L D+ R+ +A E+S+ L +P+ GY P L +
Sbjct: 303 EASVYTGVTLAEYFRD-QGYSVSLMADSTSRWAEALREISSRLEEMPAEEGYPPYLGAKL 361
Query: 381 GNMQERITTTKA-----GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGV 545
ER K G+++ + AV D+++P T A L +A
Sbjct: 362 AAFYERAGAVKTLAGEDGAVSVIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRH 421
Query: 546 YPAVD 560
+PA++
Sbjct: 422 FPAIN 426
>UniRef50_Q9YF35 Cluster: V-type ATP synthase alpha chain; n=10;
cellular organisms|Rep: V-type ATP synthase alpha chain
- Aeropyrum pernix
Length = 597
Score = 71.3 bits (167), Expect = 2e-11
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
++ G GER E ++ + T + L+ N P AR G+T+A
Sbjct: 264 IYIGCGERGNEMTEVLERFPQYKDPWTGKPLMDRTVLIANTSNMPVAAREASIYVGITIA 323
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E++RD G DVLL D+ R+ +A E++ L +P+ GY LA+ + ER K
Sbjct: 324 EYYRDM-GYDVLLVADSTSRWAEALREIAGRLEEMPAEEGYPSYLASRLAEFYERAGRVK 382
Query: 414 A-------GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
A GS+T V AV P D ++P + T + L +A YPA++ L
Sbjct: 383 ALGSPERSGSVTVVGAVSPPGGDFSEPVTSHTTRFIRVFWALDTKLAYSRHYPAINWLMS 442
Query: 573 Y 575
Y
Sbjct: 443 Y 443
>UniRef50_A5GCR1 Cluster: H+-transporting two-sector ATPase,
alpha/beta subunit, central region; n=1; Geobacter
uraniumreducens Rf4|Rep: H+-transporting two-sector
ATPase, alpha/beta subunit, central region - Geobacter
uraniumreducens Rf4
Length = 524
Score = 70.9 bits (166), Expect = 2e-11
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMK-VGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
V+ G GER E +L E + T + +V N P AR T +T+A
Sbjct: 234 VYVGCGERGNEMAELLDEFAALSDPWTGKPLMDRTIVVVNTSNMPVAAREASIYTAVTMA 293
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E++RD G VLL D+I R+ +A E+S+ L +P GY LA+ + ER +
Sbjct: 294 EYYRDM-GYHVLLLADSISRWAEALREISSSLEEMPGEEGYPTYLASRLSGFFERAGVVE 352
Query: 414 A-----GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDFY 575
GS++ + +V P D T+P A +L A+A +PA++ Y
Sbjct: 353 TMNCGIGSLSMILSVSPPGGDFTEPVTQACLRTAGAFFMLDTALAHRRHFPAINWFQSY 411
>UniRef50_Q8FXF0 Cluster: Flagellum-specific ATP synthase FliI; n=2;
Brucella|Rep: Flagellum-specific ATP synthase FliI -
Brucella suis
Length = 422
Score = 70.5 bits (165), Expect = 3e-11
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V A GER RE ++ E G + K V +E P R T +AE
Sbjct: 197 VLALTGERGREVREMLEETMAGHL-------GKTITVVATGDESPMMRRLAPNTATAIAE 249
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI---TT 407
+FRD GQ+VLL +D++ RF A EV+ P A GY P++ + + + ER +
Sbjct: 250 YFRDL-GQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308
Query: 408 TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 539
GSI + +V V DD DPA + A + T + + +L
Sbjct: 309 EAGGSIAGIYSVLVDGDDHNDPASVSRLAKHNWTPEQRKLVMQL 352
>UniRef50_Q74MS5 Cluster: NEQ263; n=1; Nanoarchaeum equitans|Rep:
NEQ263 - Nanoarchaeum equitans
Length = 416
Score = 70.5 bits (165), Expect = 3e-11
Identities = 52/187 (27%), Positives = 88/187 (47%)
Frame = +3
Query: 6 LIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNE 185
L +++ NVAK +FA +G + D+Y + T S + + + +
Sbjct: 143 LALQIARNVAKDKT--IIFAAIGVPS----DIYKMFIDEFINTKAIMNSAIFI--SKADS 194
Query: 186 PPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 365
P + LTLAE+ ++ +DVL+ + ++ + A E+S L IPS GY
Sbjct: 195 SPIEKIYTPRVALTLAEYLAFEKNRDVLVLMLDMTNYADALREISTLRKEIPSRRGYPAY 254
Query: 366 LATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGV 545
L TD+ ++ ER T GSIT + + +P +D+T P T + VLS+ + +
Sbjct: 255 LYTDLASIYERSGLTSKGSITLIPMLTMPGNDITHVVPDLTGYITEGQYVLSQDLHSKNI 314
Query: 546 YPAVDPL 566
YP +D L
Sbjct: 315 YPPIDLL 321
>UniRef50_Q971B7 Cluster: V-type ATP synthase alpha chain; n=11;
Archaea|Rep: V-type ATP synthase alpha chain -
Sulfolobus tokodaii
Length = 592
Score = 68.5 bits (160), Expect = 1e-10
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTS----KVSLVYGQMNEPPGARARVALTGL 224
++ G GER GN++ E++ + D + + LV N P AR G+
Sbjct: 257 IYVGCGER---GNEMTDELRSFPKLKDPWTGKPLLLRTILVANTSNMPVAARESSIYVGV 313
Query: 225 TLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERIT 404
T+AE+FRD +G DVLL D+ R+ +A ++ + +P+ G+ L + + ER
Sbjct: 314 TMAEYFRD-QGYDVLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAG 372
Query: 405 TTKA-------GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
A GS+T AV P D T+P + T + L ++A+ YPA++
Sbjct: 373 RVIALGNPERYGSVTIASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVSLAQARHYPAIN 431
>UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;
Bacteria|Rep: V-type ATP synthase alpha chain 2 -
Treponema pallidum
Length = 605
Score = 68.5 bits (160), Expect = 1e-10
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
V+ G GER E D+ E K+ T + L+ N P AR +G+TLA
Sbjct: 265 VYIGCGERGNEMTDVLSEFPKLIDPRTGRSLMERTILIANTSNMPVSAREVSLYSGITLA 324
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER----- 398
E++RD G V + D+ R+ +A E+S + +P+ G+ L T + ER
Sbjct: 325 EYYRDM-GMHVAIMADSTSRWAEALRELSGRMEEMPAEEGFPAYLPTRLAEFYERAGRVE 383
Query: 399 ITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDFYL 578
+ GS++ + AV D ++P T + L R +A YPA+ +D Y
Sbjct: 384 TCVAREGSVSIIGAVSPLGGDFSEPVTQHTKRFIRCFWALDRELAHARHYPAIGWIDSYS 443
Query: 579 E 581
E
Sbjct: 444 E 444
>UniRef50_A7B5P4 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus gnavus ATCC 29149
Length = 591
Score = 67.7 bits (158), Expect = 2e-10
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVI---TDDYKTSKVSLVYGQMNEPPGARARVALTGLT 227
++ G GER E + E G +I T + + +L+ N P AR TGLT
Sbjct: 260 IYIGCGERGNEMTQVLEEF--GELIDPKTGNPLMDRTTLIANTSNMPVAAREASIYTGLT 317
Query: 228 LAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI-- 401
LAE++RD G DV + D+ R+ +A E+S L +P+ G+ LA+ + ER
Sbjct: 318 LAEYYRDM-GYDVAIMADSTSRWAEALRELSGRLEEMPAEEGFPAYLASRLSGFYERAGM 376
Query: 402 ---TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
GS+T + AV D ++P T + L +++A +PA+ L
Sbjct: 377 MHNLNGTDGSVTIIGAVSPQGGDFSEPVTQNTKRFVRCFWGLDKSLAYARHFPAIHWLTS 436
Query: 573 YLE 581
Y E
Sbjct: 437 YSE 439
>UniRef50_A1GDC5 Cluster: Putative uncharacterized protein; n=1;
Salinispora arenicola CNS205|Rep: Putative
uncharacterized protein - Salinispora arenicola CNS205
Length = 525
Score = 67.7 bits (158), Expect = 2e-10
Identities = 49/153 (32%), Positives = 78/153 (50%)
Frame = -2
Query: 503 VQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFLHITHVRGQCWLVPDSGWYPPKQ 324
VQ+ ER GR V V+G + L D + GGD L + H+ GQ LV +P +Q
Sbjct: 122 VQVGERGGRRRVGVVVGRHIDRLQRGDRLATHGGDPLLELAHLVGQRRLVTHGARHPAEQ 181
Query: 323 GRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCESNPSSGTWRFVHLPVNQGDLGSF 144
+L L E+ED++++ Q++L L V E+L Q +S+ G R VHL ++Q L
Sbjct: 182 RGHLRASLGETEDVVDEEQHLLLLNVPEILRHGQRGKSDAQPGARRLVHLAIDQRGL--- 238
Query: 143 IVVCNNASDFHFMVEIVPLARPLPYAGKNREST 45
++A H ++V L L + ++R +T
Sbjct: 239 ---VDHAGLGHLGDQVVTLPGTLTHPSEDRGAT 268
>UniRef50_Q874G5 Cluster: Vacuolar membrane ATPase subunit a; n=7;
Saccharomycetaceae|Rep: Vacuolar membrane ATPase subunit
a - Saccharomyces castellii (Yeast)
Length = 1101
Score = 67.7 bits (158), Expect = 2e-10
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332
+ +LV N P AR TG+TLAE+FRD +G+DV + D+ R+ +A E+S LG
Sbjct: 814 RTTLVANTSNMPVAAREASIYTGITLAEYFRD-QGKDVSMIADSSSRWAEALREISGRLG 872
Query: 333 RIPSAVGYQPTLATDMGNMQERI-------TTTKAGSITSVQAVYVPADDLTDPAPATTF 491
+P+ G+ L + + ER + + GS++ V AV D +DP T
Sbjct: 873 EMPADQGFPAYLGAKLASFYERAGKAVALGSPDRIGSVSIVAAVSPAGGDFSDPVTTATL 932
Query: 492 AHLDATTVLSRAIAELGVYPAVD 560
L + +A+ +P+++
Sbjct: 933 GITQVFWGLDKKLAQRKHFPSIN 955
>UniRef50_Q97CQ0 Cluster: V-type ATP synthase alpha chain (EC
3.6.3.14) (V-type ATPase subunit A) [Contains: Tvo atpA
intein (Tvo VMA intein)]; n=2; Thermoplasma|Rep: V-type
ATP synthase alpha chain (EC 3.6.3.14) (V-type ATPase
subunit A) [Contains: Tvo atpA intein (Tvo VMA intein)]
- Thermoplasma volcanium
Length = 776
Score = 67.7 bits (158), Expect = 2e-10
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
V+ G GER E ++ ++ ++ + L+ N P AR TG+T+A
Sbjct: 438 VYIGCGERGNEMTEILTTFPELKDPVSGQPLMDRTVLIANTSNMPVAAREASIYTGITIA 497
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E++RD G DV L D+ R+ +A E+S L +P GY L + ER +
Sbjct: 498 EYYRDM-GYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRISEFYERSGRAR 556
Query: 414 A-------GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
GSIT + AV P D+++P T L ++A +P+++ L+
Sbjct: 557 LVSPEDRFGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDASLANRRHFPSINWLNS 616
Query: 573 Y 575
Y
Sbjct: 617 Y 617
>UniRef50_A5DXZ0 Cluster: Vacuolar ATP synthase catalytic subunit A;
n=8; Saccharomycetales|Rep: Vacuolar ATP synthase
catalytic subunit A - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 1034
Score = 66.9 bits (156), Expect = 3e-10
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Frame = +3
Query: 12 MELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPP 191
M L++N+A H + E E +LY E + G K + +LV N P
Sbjct: 689 MFLLSNLALVHNCGERGNEMAEVLMEFPELYTE--IDGRKEPIMK--RTTLVANTSNMPV 744
Query: 192 GARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLA 371
AR TG+TLAE+FRD +G++V + D+ R+ +A E+S LG +P+ G+ L
Sbjct: 745 AAREASIYTGITLAEYFRD-QGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLG 803
Query: 372 TDMGNMQERI-------TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAI 530
+ + ER + + GS++ V AV D +DP T L + +
Sbjct: 804 AKLASFYERAGKATALGSPDRVGSVSVVAAVSPAGGDFSDPVTTATLGITQVFWGLDKKL 863
Query: 531 AELGVYPAVD 560
A+ +P+++
Sbjct: 864 AQRKHFPSIN 873
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 66.9 bits (156), Expect = 3e-10
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
VFA +G E + + G I D ++L N+P R LT AE
Sbjct: 180 VFAAIGITFEEAEFFMEDFRQTGAI--DRSVMFMNLA----NDPAIERIATPRMALTAAE 233
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
+ ++G VL+ + ++ + +A E+SA +P GY L T++ + ER +
Sbjct: 234 YLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYTNLATLFERAGRIRG 293
Query: 417 --GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GS+T + + +P DD T P P T + +L+R + + G+ P +D L
Sbjct: 294 LKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVL 345
>UniRef50_Q4S553 Cluster: Chromosome 6 SCAF14737, whole genome
shotgun sequence; n=7; Deuterostomia|Rep: Chromosome 6
SCAF14737, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 757
Score = 66.5 bits (155), Expect = 4e-10
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHE-----MKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTG 221
++ G GER E +++ + M+V G K + +LV N P AR TG
Sbjct: 311 IYVGCGERGNEMSEVLRDFPELTMEVDGKTESIMK--RTALVANTSNMPVAAREASIYTG 368
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI 401
+TL+E+FRD G +V + D+ R+ +A E+S L +P+ GY L + + ER
Sbjct: 369 ITLSEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERA 427
Query: 402 TTTKA-------GSITSVQAVYVPADDLTDPAPATT 488
K GS++ V AV P D +DP + T
Sbjct: 428 GRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSAT 463
>UniRef50_A5ZRD0 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 589
Score = 66.5 bits (155), Expect = 4e-10
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
++ G GER E + + K+ + + + +L+ N P AR TG+TLA
Sbjct: 258 IYIGCGERGNEMTQVLEDFSKLIDPKSGNLMMDRTTLIANTSNMPVAAREASIYTGVTLA 317
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E++RD G DV + D+ R+ +A E+S L +P+ G+ LA+ + ER +
Sbjct: 318 EYYRDM-GYDVAIMADSTSRWAEALRELSGRLEEMPAEEGFPAYLASKLSAFYERAGMMQ 376
Query: 414 -----AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDFYL 578
GS++ + AV D ++P T + L +A+A +PA+ L Y
Sbjct: 377 NLNGTEGSVSIIGAVSPQGGDFSEPVTQNTKRFVRCFWGLDKALAYARHFPAIHWLTSYS 436
Query: 579 E 581
E
Sbjct: 437 E 437
>UniRef50_Q6L1S7 Cluster: A1AO H+ ATPase subunit A; n=1; Picrophilus
torridus|Rep: A1AO H+ ATPase subunit A - Picrophilus
torridus
Length = 922
Score = 66.5 bits (155), Expect = 4e-10
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSK-----VSLVYGQMNEPPGARARVALTG 221
V+ G GER GN++ + + D KT K L+ N P AR TG
Sbjct: 586 VYVGCGER---GNEMTEILSTFPELMDP-KTGKPIMQRTVLIANTSNMPVAAREASIYTG 641
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM------- 380
+T+AE++RD G +V L D+ R+ +A E+S L +P GY L +
Sbjct: 642 VTIAEYYRDM-GYNVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRISEFYERS 700
Query: 381 GNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GN Q + GS+T + AV P DL+DP T L ++A +P+++
Sbjct: 701 GNAQIIAEDQRTGSVTLIGAVSPPGGDLSDPVVQNTLRVTRVFWALDASLASRRHFPSIN 760
Query: 561 PLDFY 575
L Y
Sbjct: 761 WLTSY 765
>UniRef50_P17255 Cluster: Vacuolar ATP synthase catalytic subunit A
(EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump
subunit A) [Contains: Endonuclease PI-SceI (EC 3.1.-.-)
(VMA1-derived endonuclease) (VDE) (Sce VMA intein)];
n=14; Ascomycota|Rep: Vacuolar ATP synthase catalytic
subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar
proton pump subunit A) [Contains: Endonuclease PI-SceI
(EC 3.1.-.-) (VMA1-derived endonuclease) (VDE) (Sce VMA
intein)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 1071
Score = 66.5 bits (155), Expect = 4e-10
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
+ E E +LY EM T + + +LV N P AR TG+TLAE+FRD
Sbjct: 745 MAEVLMEFPELYTEMSG----TKEPIMKRTTLVANTSNMPVAAREASIYTGITLAEYFRD 800
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI-------TT 407
+G++V + D+ R+ +A E+S LG +P+ G+ L + + ER +
Sbjct: 801 -QGKNVSMIADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKAVALGSP 859
Query: 408 TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+ GS++ V AV D +DP T L + +A+ +P+++
Sbjct: 860 DRTGSVSIVAAVSPAGGDFSDPVTTATLGITQVFWGLDKKLAQRKHFPSIN 910
>UniRef50_A3LP04 Cluster: Vacuolar H+-ATPase V1 sector, subunit A;
n=7; Saccharomycetaceae|Rep: Vacuolar H+-ATPase V1
sector, subunit A - Pichia stipitis (Yeast)
Length = 1065
Score = 66.1 bits (154), Expect = 6e-10
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332
+ +LV N P AR TG+TLAE+FRD +G++V + D+ R+ +A E+S LG
Sbjct: 763 RTTLVANTSNMPVAAREASIYTGITLAEYFRD-QGKNVSMIADSSSRWAEALREISGRLG 821
Query: 333 RIPSAVGYQPTLATDMGNMQERI-------TTTKAGSITSVQAVYVPADDLTDPAPATTF 491
+P+ G+ L + + ER + + GS++ V AV D +DP +T
Sbjct: 822 EMPADQGFPAYLGAKLASFYERAGKSVALGSPERLGSVSIVAAVSPAGGDFSDPVTTSTL 881
Query: 492 AHLDATTVLSRAIAELGVYPAVD 560
L + +A+ +P+++
Sbjct: 882 GITQVFWGLDKKLAQRKHFPSIN 904
>UniRef50_Q141X8 Cluster: ATPase FliI/YscN; n=1; Burkholderia
xenovorans LB400|Rep: ATPase FliI/YscN - Burkholderia
xenovorans (strain LB400)
Length = 444
Score = 64.9 bits (151), Expect = 1e-09
Identities = 51/186 (27%), Positives = 81/186 (43%)
Frame = +3
Query: 9 IMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEP 188
IM +I N A V A +GER RE + H+ + + + ++ + P
Sbjct: 179 IMGMIANGASTDA--IVVALIGERGREVAEFIHDHL-------ERRRASTIVIAATSDRP 229
Query: 189 PGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 368
R + A +A R G++VLL D++ R+ +A E+ +G P G+ P++
Sbjct: 230 AAERIKAAELASQVAVGLR-ASGRNVLLLFDSLTRYARALRELGLAVGEPPLRGGFPPSV 288
Query: 369 ATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVY 548
+ + E T GSIT+ V DL+DP + LD LS + G Y
Sbjct: 289 FAQLPRLIEAAGVTAQGSITAFYTVLADEADLSDPVAEEARSLLDGHIQLSSKLGAAGHY 348
Query: 549 PAVDPL 566
PA+D L
Sbjct: 349 PAIDIL 354
>UniRef50_Q6BRM0 Cluster: Debaryomyces hansenii chromosome D of strain
CBS767 of Debaryomyces hansenii; n=2; Debaryomyces
hansenii|Rep: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 999
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332
+ +LV N P AR TG+TLAE+FRD +G+ V + D+ R+ +A E+S LG
Sbjct: 697 RTTLVANTSNMPVAAREASIYTGITLAEYFRD-QGKHVSMIADSSSRWAEALRELSGRLG 755
Query: 333 RIPSAVGYQPTLATDMGNMQERI-------TTTKAGSITSVQAVYVPADDLTDPAPATTF 491
+P+ G+ L + + ER + + GS++ V AV D +DP T
Sbjct: 756 EMPADQGFPAYLGAKLASFYERAGKAVALGSPDRIGSVSIVAAVSPAGGDFSDPVTTATL 815
Query: 492 AHLDATTVLSRAIAELGVYPAVD 560
L + +A+ +P+V+
Sbjct: 816 GITQVFWGLDKKLAQRKHFPSVN 838
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 63.7 bits (148), Expect = 3e-09
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Frame = +3
Query: 69 VGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD 248
VGER RE D + +G D K S V + + P + + +AE+F +
Sbjct: 211 VGERGREVKDFIDNI-LG---KDSLKKSVV--IVSSADVSPMFKIQSVEYATAVAEYFCN 264
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITT--TKAGS 422
K G +VLL +D++ R+ A EVS L IP Y ++ +++ + ER K+GS
Sbjct: 265 K-GNNVLLIVDSLTRYAMAYREVSNSLYEIP-VKRYPASIFSNIPYLIERTGNIDNKSGS 322
Query: 423 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
ITS + D+ DP T + LD +LS ++E G YPA++
Sbjct: 323 ITSFYTILTEGDEYNDPILDITKSVLDGHIILSNVLSESGHYPAIN 368
>UniRef50_A4EBH3 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 678
Score = 62.9 bits (146), Expect = 5e-09
Identities = 49/181 (27%), Positives = 91/181 (50%)
Frame = -2
Query: 566 QRVDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFLH 387
+RVD ++ R + +++ +RRGR + QV+ DV L +GA G+ L
Sbjct: 258 ERVDSREQAERRNATRKNRSGIEVRKRRGRRRIGQVVCGDVDSLDGGNGARLGRGNALLE 317
Query: 386 ITHVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCESN 207
+ H+ Q LV + G + +Q L L E+ED++++ Q +L+ ++E+L + +++
Sbjct: 318 VAHLGCQRGLVTNGGRHTAQQCGNLGTRLGEAEDVVDEQQNVLT-AIAEVLSGGKAGQTD 376
Query: 206 PSSGTWRFVHLPVNQGDLGSFIVVCNNASDFHFMVEIVPLARPLPYAGKNRESTVSFRHI 27
+ + R VHL ++Q L +NA H ++ LA L AG++R + V +
Sbjct: 377 AQTRSGRLVHLTIDQAGL------VDNARLAHLEEQVGALAGTLADAGEHRGAAVLLGKV 430
Query: 26 V 24
V
Sbjct: 431 V 431
>UniRef50_Q21Z99 Cluster: ATP synthase subunit alpha 2; n=22;
cellular organisms|Rep: ATP synthase subunit alpha 2 -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 534
Score = 62.5 bits (145), Expect = 7e-09
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
V+ +G+R + ++ G + D+ T +V + N+PPG ++AE
Sbjct: 200 VYCAIGQRASAVAKVVATLREKGAM--DFTT----VVVTEGNDPPGLAYIAPYAATSIAE 253
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK- 413
HF + G+DVL+ D++ + +A E+S LL R P + + + ER T +
Sbjct: 254 HFMEA-GRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATHLRQ 312
Query: 414 ---AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GS+T++ + A +++ P + D LS ++ ELGV PAVD
Sbjct: 313 ERGGGSLTALPIIETQAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVD 364
>UniRef50_A0FYQ8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phymatum STM815|Rep: Putative
uncharacterized protein - Burkholderia phymatum STM815
Length = 503
Score = 59.7 bits (138), Expect = 5e-08
Identities = 49/186 (26%), Positives = 83/186 (44%)
Frame = -2
Query: 560 VDGWVHT*LSDSPR*DSRCVQMSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFLHIT 381
+D +H PR V + R V ++IG +V L R G ++FL
Sbjct: 141 IDCGIHAFGRLRPREHHHAVDVRRNRRHGGVGEIIGGNVDGLDRRHGRLAHRRNSFLQRR 200
Query: 380 HVRGQCWLVPDSGWYPPKQGRYL*PGLRESEDIINK*QYILSLLVSEMLC*CQPCESNPS 201
++ + L+ + +Q P L E + ++++ QYIL + V+E+ Q + +
Sbjct: 201 NLARKRRLIAHPRRHATQQPGDFRPRLNEPKHVVHQQQYILMVFVAEVFGDRQRRQRHSP 260
Query: 200 SGTWRFVHLPVNQGDLGSFIVVCNNASDFHFMVEIVPLARPLPYAGKNRESTVSFRHIVY 21
+ R VHLPV+Q +A H +V AR L A ++R++ V F H +
Sbjct: 261 ASARRLVHLPVDQHG------ARQHARTAHVSEHLVTFARALADAREHRDAAVLFGHRMN 314
Query: 20 QFHDEH 3
QFH +H
Sbjct: 315 QFHHQH 320
>UniRef50_Q822J8 Cluster: V-type ATP synthase alpha chain; n=15;
Bacteria|Rep: V-type ATP synthase alpha chain -
Chlamydophila caviae
Length = 591
Score = 59.3 bits (137), Expect = 7e-08
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMK-VGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+ GER E ++ E + T + + ++ + P AR G+T+A
Sbjct: 265 ILCACGERAGEVVEVLQEFPHLTDPHTGESLMHRTCIICNTSSMPVAARESSIYLGITVA 324
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER----- 398
E++R G VLL D+ R+ QA E+S L IP + LA+ + ER
Sbjct: 325 EYYRQM-GLHVLLLADSTSRWAQALREISGRLEEIPGEEAFPAYLASRIAAFYERGGAVR 383
Query: 399 ITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
+ GS+T AV + +P T + + A LS+A A+ YP++DP+
Sbjct: 384 MKDGSEGSLTICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPM 439
>UniRef50_Q8A875 Cluster: V-type ATP synthase subunit A; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit A -
Bacteroides thetaiotaomicron
Length = 585
Score = 58.4 bits (135), Expect = 1e-07
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Frame = +3
Query: 36 KAHGGFSVFAGVGERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEPPGARARVA 212
+A + A GER E +++ E ++ T + ++ N P AR
Sbjct: 251 QAEADIVIIAACGERANEVVEIFTEFPELVDPHTGRKLMERTIIIANTSNMPVAAREASV 310
Query: 213 LTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQ 392
T ++LAE++R G VLL D+ R+ QA E+S + +P + ++ + N
Sbjct: 311 YTAMSLAEYYRSM-GLKVLLMADSTSRWAQALREMSNRMEELPGPDAFPMDISAIISNFY 369
Query: 393 ER-----ITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAV 557
R + + GSIT + V +L +P T L + A+ YPAV
Sbjct: 370 GRAGYVKLNNDETGSITFIGTVSPAGGNLKEPVTENTKKVARCFYALEQDRADKKRYPAV 429
Query: 558 DPLDFY 575
+P+D Y
Sbjct: 430 NPIDSY 435
>UniRef50_Q7QUD4 Cluster: GLP_59_34747_32780; n=2; Giardia
intestinalis|Rep: GLP_59_34747_32780 - Giardia lamblia
ATCC 50803
Length = 655
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +3
Query: 108 EMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNI 287
+ ++ V++D + S+ LV N P AR TG+T++E FRD +G +V L D+
Sbjct: 313 QQEIKTVVSDIF--SRTVLVANTSNMPVAAREASIYTGITISEFFRD-QGYNVTLLADST 369
Query: 288 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER 398
R+ +A E+S LG IP GY L + + + ER
Sbjct: 370 SRWAEALREISGRLGGIPGEGGYPADLTSKLSHFYER 406
>UniRef50_A3Z0H3 Cluster: V-type ATPase, A subunit; n=5;
Bacteria|Rep: V-type ATPase, A subunit - Synechococcus
sp. WH 5701
Length = 621
Score = 56.0 bits (129), Expect = 6e-07
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 8/191 (4%)
Frame = +3
Query: 18 LINNVAKAHGGFSVFAGV--GERTREGNDLYHEM-KVGGVITDDYKTSKVSLVYGQMNEP 188
++ N+ H V V GER E + E K+ T + ++ + P
Sbjct: 264 VLQNLISRHSDVDVVLVVACGERAGEVVETITEFPKLTDPKTGGSLMDRTIIICNTSSMP 323
Query: 189 PGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 368
AR TGLTL E++R G +VLL D+ R+ QA E S L IP + L
Sbjct: 324 VAAREASIYTGLTLGEYYRQM-GCNVLLIADSTSRWAQAMRETSGRLEEIPGEDAFPAYL 382
Query: 369 ATDMGNMQER---ITTT--KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIA 533
+ + + ER I T GS+T + V + +P +T + + A LS A
Sbjct: 383 DSAIKGVYERAGIIRTNDGSVGSLTMIGTVSPAGGNFEEPVTQSTLSTVKAFLGLSAERA 442
Query: 534 ELGVYPAVDPL 566
YPAVD L
Sbjct: 443 YKRCYPAVDIL 453
>UniRef50_P15313 Cluster: Vacuolar ATP synthase subunit B, kidney
isoform; n=451; cellular organisms|Rep: Vacuolar ATP
synthase subunit B, kidney isoform - Homo sapiens
(Human)
Length = 513
Score = 56.0 bits (129), Expect = 6e-07
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = +3
Query: 156 VSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGR 335
V L N+P R LT AE + + VL+ + ++ + +A EVSA
Sbjct: 251 VCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREE 310
Query: 336 IPSAVGYQPTLATDMGNMQERI--TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDAT 509
+P G+ + TD+ + ER + GSIT + + +P DD+T P P T +
Sbjct: 311 VPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQ 370
Query: 510 TVLSRAIAELGVYPAVDPL 566
+ R + +YP ++ L
Sbjct: 371 IYVDRQLHNRQIYPPINVL 389
>UniRef50_Q25691 Cluster: Vacuolar ATP synthase subunit B; n=25;
Eukaryota|Rep: Vacuolar ATP synthase subunit B -
Plasmodium falciparum
Length = 494
Score = 55.6 bits (128), Expect = 8e-07
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Frame = +3
Query: 144 KTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSA 323
K +V L N+P R LT AE+ ++ V + + ++ + A EVS+
Sbjct: 237 KMERVCLFLNLANDPTIERILTPRIALTTAEYLAFEKEMHVFVILTDMSSYADALREVSS 296
Query: 324 LLGRIPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAH 497
+P GY + +D+ + ER + GSIT + +P DD+T P P T
Sbjct: 297 AREEVPGRRGYPGYMYSDLSTIYERAGRVEGRNGSITQFPILTMPNDDITHPIPDLTGYI 356
Query: 498 LDATTVLSRAIAELGVYPAVDPL 566
+ + R + +YP ++ L
Sbjct: 357 TEGQIFVDRNLYNRQIYPPINVL 379
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.3.14)
(V-type ATPase subunit B) [Contains: Mka atpB intein];
n=8; cellular organisms|Rep: V-type ATP synthase beta
chain (EC 3.6.3.14) (V-type ATPase subunit B) [Contains:
Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 300 QAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDP 473
+A E+SA +P GY + TD+ + ER + GSIT + + +P DD+T P
Sbjct: 779 EALREISAAREEVPGRRGYPGYMYTDLATIYERAGCIRGRKGSITQMPILTMPHDDITHP 838
Query: 474 APATTFAHLDATTVLSRAIAELGVYPAVDPL 566
P T + VLSR + G+YP +D L
Sbjct: 839 IPDLTGYITEGQIVLSRDLHRRGIYPPIDVL 869
>UniRef50_A6AXF1 Cluster: VcsN2; n=7; Vibrio|Rep: VcsN2 - Vibrio
parahaemolyticus AQ3810
Length = 420
Score = 54.0 bits (124), Expect = 2e-06
Identities = 43/170 (25%), Positives = 77/170 (45%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
+FA +GER RE + G I + +++V P + R L +++A
Sbjct: 176 IFAMIGERAREVVEFLE-----GEIGPEVIRKSITIV-STSEANPLEKVRSGLVAVSIAR 229
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA 416
++ + +G+ V+L+ D++ RF +A A+L P G ++ + + E +
Sbjct: 230 YYME-QGKKVVLYFDSLTRFARA----QAMLDGTPIKGGIPIGVSLALSRLVESCGNSIQ 284
Query: 417 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPL 566
GS+T + V + + DP + +D V S IA G YPA+D L
Sbjct: 285 GSVTGIFTVLIEKEIDDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVL 334
>UniRef50_Q9PK86 Cluster: V-type ATP synthase beta chain; n=19;
Bacteria|Rep: V-type ATP synthase beta chain - Chlamydia
muridarum
Length = 438
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER- 398
L AE F ++ ++VL+ + ++ F A E++ + +IP+ GY +L +D+ E+
Sbjct: 220 LACAERFALEQKKNVLVLLTDMTAFADALKEIAITMDQIPANRGYPGSLYSDLAVRYEKA 279
Query: 399 ITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ + GSIT + +P DD+T P P T
Sbjct: 280 VDIAQGGSITLISVTTMPGDDITHPVPDNT 309
>UniRef50_Q9PLK9 Cluster: Virulence ATPase, putative; n=9;
Chlamydiaceae|Rep: Virulence ATPase, putative -
Chlamydia muridarum
Length = 434
Score = 52.4 bits (120), Expect = 8e-06
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L++ +AK + +V A +GER RE D ++ K G + +V +E
Sbjct: 173 LLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEG------LAAQRTIIVVSTAHETAA 226
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
++ +T+AE+FRD +G VL +D++ R+ ++ EV+ G S Y ++
Sbjct: 227 SKVIAGRAAITIAEYFRD-QGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFH 285
Query: 375 DMGNMQERITTTKAGSITSVQAV 443
+ ER GSITS A+
Sbjct: 286 HVSEFLERAGNNDKGSITSFYAM 308
>UniRef50_UPI00005F655A Cluster: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase; n=1;
Yersinia pestis Angola|Rep: COG1157: Flagellar
biosynthesis/type III secretory pathway ATPase -
Yersinia pestis Angola
Length = 389
Score = 52.0 bits (119), Expect = 1e-05
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 123 GVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQ 302
G+IT Y + V +V +E P R + +A ++RDK G DVLL +D++ R+
Sbjct: 178 GMITR-YTQADVVVVAAPADESPLMRIKATELCHAIATYYRDK-GHDVLLLVDSLTRYAM 235
Query: 303 AGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKA-GSITSVQAVYVPA 455
A E++ LG P+ GY P+ + + + E + G++T++ V A
Sbjct: 236 AQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSSGNGTMTAIYTVLAEA 287
>UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax
polyedra|Rep: ATP synthase beta chain - Gonyaulax
polyedra (Dinoflagellate)
Length = 253
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +3
Query: 471 PAPATTFAHLDATTVLSRAIAELGVYPAVDPLD 569
PAP F HLDA TVLSR +A G+YPAVDP +
Sbjct: 63 PAPVVIFGHLDAVTVLSRVLAAKGIYPAVDPFN 95
>UniRef50_A3JAC3 Cluster: F0F1 ATP synthase subunit alpha; n=3;
Proteobacteria|Rep: F0F1 ATP synthase subunit alpha -
Marinobacter sp. ELB17
Length = 549
Score = 50.0 bits (114), Expect = 4e-05
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Frame = +3
Query: 117 VGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRF 296
+G + D + + G E PG +T+AE+F D +G+DVL+ D++
Sbjct: 245 IGALKKGDMMARSIVMSAGD-EETPGLAYIAPYAAMTMAEYFCD-QGRDVLIIFDDLTHH 302
Query: 297 TQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER----ITTTKAGSITSVQAVYVPADDL 464
++ E+S LL R P + + + ER GSIT++ V A++L
Sbjct: 303 ARSYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFTEEVGGGSITALPVVETQAENL 362
Query: 465 TDPAPATTFAHLDATTVLSRAIAELGVYPAV 557
+ P + D LS + + +PAV
Sbjct: 363 SAYIPTNLISITDGQIYLSPQLVQKNQFPAV 393
>UniRef50_Q98QX5 Cluster: ATP SYNTHASE ALPHA CHAIN; n=2;
Mycoplasma|Rep: ATP SYNTHASE ALPHA CHAIN - Mycoplasma
pulmonis
Length = 529
Score = 47.6 bits (108), Expect = 2e-04
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 4/173 (2%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
S++A VG++ E +++ +K ++ K ++ ++ + + +++A
Sbjct: 173 SIYAAVGKKREEVVEIFSVLKSRKLM------DKTIIISSSADDLAVTKYLLPYVSMSVA 226
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
EH++ G+DVL+ ID++ A E+S L G P Y + + ER
Sbjct: 227 EHYQSL-GRDVLVVIDDLTNHADAYREISLLSGSAPGREAYPGDIFYTHSRLLERAGKFS 285
Query: 414 ----AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSIT + A D++ P + D S + G PA+D
Sbjct: 286 DEFGGGSITCIPIAQTLASDISGYIPTNLISITDGQIFTSTKLFNSGKRPAID 338
>UniRef50_A2W3Z6 Cluster: ATPase FliI/YscN; n=1; Burkholderia
cenocepacia PC184|Rep: ATPase FliI/YscN - Burkholderia
cenocepacia PC184
Length = 386
Score = 47.6 bits (108), Expect = 2e-04
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 LINNVAK-AHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
L+ +A+ A +V A VGER RE + ++ + + + +V + P
Sbjct: 107 LLGMIARGAQADVNVIALVGERGREVREFIEHS-----LSPEVRARSI-VVVSTSDRPAM 160
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPS 344
R + AL +AEHFRD G+ VLL +D++ RF +A EV G P+
Sbjct: 161 ERVKSALVATAIAEHFRD-AGKRVLLLVDSLTRFARAQREVGLASGEPPT 209
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 46.4 bits (105), Expect = 5e-04
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Frame = +3
Query: 219 GLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER 398
G+ +AE RD +G+DVL+ D++ + A ++ L R P Y ++ ER
Sbjct: 237 GMAVAEALRD-QGKDVLIIFDDLTKHADAYRAITLLFNRPPGREAYPGDSFYIHSSLLER 295
Query: 399 ITTTK----AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GSIT++ + +DD+T P + D L + G PAVD
Sbjct: 296 AVQMNQDHGGGSITAIPMIETLSDDVTAYIPTNVISITDGQLFLKSDLFNRGQKPAVD 353
>UniRef50_P45835 Cluster: Transcription termination factor rho;
n=87; Bacteria|Rep: Transcription termination factor rho
- Mycobacterium leprae
Length = 610
Score = 45.6 bits (103), Expect = 9e-04
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD ++ K ++ + PP VA + A+ + +G+DV++ +D+I R +A
Sbjct: 399 VTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVE-QGKDVVVLLDSITRLGRAY 457
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ S GRI S L + + GS+T + V D
Sbjct: 458 NNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDMVIFEE 517
Query: 489 FAHL-DATTVLSRAIAELGVYPAVD 560
F +A L R IAE V+PAVD
Sbjct: 518 FKGTGNAELKLDRKIAERRVFPAVD 542
>UniRef50_Q9AHX2 Cluster: ATP synthase alpha subunit; n=10;
Candidatus Carsonella ruddii|Rep: ATP synthase alpha
subunit - Carsonella ruddii
Length = 481
Score = 45.2 bits (102), Expect = 0.001
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Frame = +3
Query: 216 TGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE 395
TG T++E+FRDK GQD L+ D++ + A ++S LL R P Y + + E
Sbjct: 217 TGSTISEYFRDK-GQDCLIVYDDLTKHAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLE 275
Query: 396 RITTT------------KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 539
R + KAGS+T+ + D+T P + D L +
Sbjct: 276 RSSKVNKFFVNKKSNILKAGSLTAFPIIETLEGDVTSFIPTNVISITDGQIFLDTNLFNS 335
Query: 540 GVYPAVD 560
G+ P+++
Sbjct: 336 GIRPSIN 342
>UniRef50_Q8A876 Cluster: V-type ATP synthase subunit B; n=9;
Bacteroidales|Rep: V-type ATP synthase subunit B -
Bacteroides thetaiotaomicron
Length = 441
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = +3
Query: 186 PPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 365
PP R + LT AE+F + VL+ + ++ + A + VS + +IPS +
Sbjct: 208 PPVERLLIPDMALTAAEYFAVNNNEKVLVLLTDMTSYADALAIVSNRMDQIPSKDSMPGS 267
Query: 366 LATDMGNMQER-ITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
L +D+ + E+ + GSIT + + D+T P T ++ + R +++G
Sbjct: 268 LYSDLAKIYEKAVQFPSGGSITIIAVTTLSGGDITHAVPDNT-GYITEGQLFLRRDSDIG 326
Query: 543 VYPAVDP 563
VDP
Sbjct: 327 KV-IVDP 332
>UniRef50_Q62EB0 Cluster: ATP synthase subunit alpha 2; n=25;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Burkholderia mallei (Pseudomonas mallei)
Length = 670
Score = 43.6 bits (98), Expect = 0.004
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Frame = +3
Query: 189 PGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 368
PG + G ++AE+FRD+ GQ L+ +D++ + E++ L P Y +
Sbjct: 243 PGLQWIAPFAGFSIAEYFRDR-GQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDI 301
Query: 369 ATDMGNMQERITTTKA----GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAE 536
+ ER A GS++++ A +L P + D VL A+
Sbjct: 302 FYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFA 361
Query: 537 LGVYPAVD 560
PAVD
Sbjct: 362 ANQRPAVD 369
>UniRef50_Q8NR58 Cluster: Transcription termination factor; n=3;
Corynebacterium|Rep: Transcription termination factor -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 762
Score = 43.2 bits (97), Expect = 0.005
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD ++ ++ + PP VA + A+ + +GQDV++ +D+I R +A
Sbjct: 546 VTDMQRSVNGEVISSTFDRPPSEHTAVAELAIERAKRLVE-QGQDVVVLLDSITRLGRAY 604
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ S GRI S L + GS+T + V D
Sbjct: 605 NNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEE 664
Query: 489 FAHL-DATTVLSRAIAELGVYPAVD 560
F +A L R I+E V+PAVD
Sbjct: 665 FKGTGNAELKLDRKISERRVFPAVD 689
>UniRef50_Q6KHZ3 Cluster: ATP synthase alpha chain; n=1; Mycoplasma
mobile|Rep: ATP synthase alpha chain - Mycoplasma mobile
Length = 516
Score = 42.7 bits (96), Expect = 0.006
Identities = 35/172 (20%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
+V+ +G+R N +Y+ + +++ K +++ +E + G+T A
Sbjct: 174 AVYVAIGQRKTNINFIYNTL-------EEFDVLKNTIILEASSENLYHQFFALYVGMTHA 226
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+ K G DV++ ID++ + E++ L+ + + + + ER K
Sbjct: 227 ENIA-KNGDDVIIVIDDLSKHANIYREMALLINKPAGREAFPGDIFFTHSKVLERAGKFK 285
Query: 414 A---GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
G+IT++ V D+T + + D ++S +A G +PA+D
Sbjct: 286 NENWGTITALPIVETIEGDITSLISSNIISITDGQIIMSSELAASGKFPAID 337
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 41.5 bits (93), Expect = 0.014
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +3
Query: 216 TGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE 395
+G + E+FRDK G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 291 SGCAMGEYFRDK-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 349
Query: 396 RITTTK----AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
R GS+T++ + A D++ P + D L + G+ PA++
Sbjct: 350 RAAKMSPAMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAIN 408
>UniRef50_Q9BBC2 Cluster: ATPase CF1 alpha subunit; n=4;
Dinophyceae|Rep: ATPase CF1 alpha subunit - Amphidinium
carterae (Dinoflagellate)
Length = 464
Score = 40.7 bits (91), Expect = 0.025
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
SV+ VG++ D Y ++ V D Y+ +++V + + G LA
Sbjct: 168 SVYVPVGQKAASVLDAYQQL----VKRDVYQA--LAIVMASASTSAVMQYLSVYAGTALA 221
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E F V + D++ + A E+S LL R P + + + ER
Sbjct: 222 EFFMYNLSLPVFIAYDDLAKQASAYREISLLLRRPPGREAFPGDIFYVHSRLLERSAKLN 281
Query: 414 ----AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+GSIT+ V A D++ P + D LS + G+ PA+D
Sbjct: 282 YACGSGSITAFPIVETLAQDVSAFIPTNLISITDGQLFLSTDLFNQGIKPAID 334
>UniRef50_A4QMK9 Cluster: ORF56c; n=1; Pinus koraiensis|Rep: ORF56c
- Pinus koraiensis (Korean pine)
Length = 56
Score = 39.9 bits (89), Expect = 0.044
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -2
Query: 497 MSERRGRCWVSQVIGWDVYCLHARDGASFSGGDTFLHITHVRGQCWLVPDSG 342
M + R R V QV+ + CL+ G+ F G ++FL TH R + WL+ G
Sbjct: 1 MCKCRSRSRVGQVVSRYINCLNRGYGSLFCGSNSFLQRTHFRTKSWLITHGG 52
>UniRef50_Q2S0E2 Cluster: Transcription termination factor Rho; n=1;
Salinibacter ruber DSM 13855|Rep: Transcription
termination factor Rho - Salinibacter ruber (strain DSM
13855)
Length = 472
Score = 38.7 bits (86), Expect = 0.10
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD +T + +V +E P VA T L + GQDV + +D+I R +A
Sbjct: 271 VTDMDRTVEGEVVASTFDEEPERHVEVADTVLLKVRRLVES-GQDVCVLLDSITRLARAH 329
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ V+ GR S L ++GS+T + + D
Sbjct: 330 NAVTPEKGRTLSGGIEAGALRGPKRFFGAARNVEESGSLTIIGTALIDTGSRMDQVIFEE 389
Query: 489 FAHL-DATTVLSRAIAELGVYPAVD 560
F + VL R +A+ +YPA+D
Sbjct: 390 FKGTGNMELVLDREMADRRLYPAID 414
>UniRef50_A5KSP4 Cluster: Sodium-transporting two-sector ATPase;
n=1; candidate division TM7 genomosp. GTL1|Rep:
Sodium-transporting two-sector ATPase - candidate
division TM7 genomosp. GTL1
Length = 495
Score = 38.7 bits (86), Expect = 0.10
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 219 GLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER 398
G +AEH G+DV++ D++ + E+S L P Y + ++ ER
Sbjct: 249 GCAIAEHLW-YGGRDVIVVYDDLTSHAKVYREISLLSEANPGRDSYPGDMFYAHSSLLER 307
Query: 399 I--TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+ ++T++ A+ P DD+T P + + D + A + PAV+
Sbjct: 308 AGKLASSGKTLTALPALVTPGDDITAYLPTSIMSITDGQIIFDLATFRQNIRPAVN 363
>UniRef50_UPI000050FC6C Cluster: COG0130: Pseudouridine synthase;
n=1; Brevibacterium linens BL2|Rep: COG0130:
Pseudouridine synthase - Brevibacterium linens BL2
Length = 305
Score = 38.3 bits (85), Expect = 0.13
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Frame = +3
Query: 96 DLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLF 275
DL+ E +TDD VS + G +++ P A + + + G + R + G+DV+L
Sbjct: 91 DLFAEPAALSAVTDDGIAHGVSALRGSIDQVPSAVSAIKVNG--QRSYARVRAGEDVVLK 148
Query: 276 ID--NIFRFTQAGSEVSALLGRIP-------SAVGYQPTLATDMG---NMQERITT---T 410
I FT + S G I S+ Y LA D+G + +T T
Sbjct: 149 ARRVEISDFTILATRYSVAQGHIDVDVEVDCSSGTYVRALARDLGGSLGVYGHLTALRRT 208
Query: 411 KAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 518
+ G+ + +AV +P DDL APA T A T+L
Sbjct: 209 RVGAFSLDEAVMIP-DDLDIEAPALTSLAEVARTLL 243
>UniRef50_Q4QJF1 Cluster: ATPase alpha subunit; n=9;
Trypanosomatidae|Rep: ATPase alpha subunit - Leishmania
major
Length = 574
Score = 37.5 bits (83), Expect = 0.23
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 4/173 (2%)
Frame = +3
Query: 54 SVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLA 233
S++ +G+R ++ ++ G + Y T ++ EP G + +G+T+
Sbjct: 228 SIYVSIGQRCSNVARIHRLLRSYGALR--YTT----VMAATAAEPAGLQYLAPYSGVTMG 281
Query: 234 EHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK 413
E+F ++ G+ L D++ + A ++S LL R P Y + + ER
Sbjct: 282 EYFMNR-GRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLS 340
Query: 414 ----AGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
GS+T++ V ++D+T + D L + G PAV+
Sbjct: 341 PGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVN 393
>UniRef50_Q98QB7 Cluster: ATP synthase subunit alpha 2; n=1;
Mycoplasma pulmonis|Rep: ATP synthase subunit alpha 2 -
Mycoplasma pulmonis
Length = 513
Score = 37.5 bits (83), Expect = 0.23
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAG-SI 425
+ G+DVL+ D++ E++ L G+ + L + ER K G SI
Sbjct: 233 QSGEDVLIIFDDLTNHANVLREIALLTGKPVGKEAFPGDLFYSHSKLLERAGKFKNGYSI 292
Query: 426 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
T V +D+T + + D V + I + G+ PA+D
Sbjct: 293 TCFPIVRTINNDMTSLLASNIASITDGQIVTNSEIKDQGILPAID 337
>UniRef50_A0E2E9 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 610
Score = 37.1 bits (82), Expect = 0.31
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = +3
Query: 216 TGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE 395
TG+T+ E+FRD G +V +D+ +++QA +++ LG I + L +G
Sbjct: 330 TGITIGEYFRDM-GLNVSFIVDSTNQWSQAVNQIQEKLGEILPSETQSEVLTAKIGQFYN 388
Query: 396 RI-------TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPA 554
R + + GSIT V D + T + +L + +++ +P
Sbjct: 389 RAGRVRCLGSPERIGSITMVGIATQSEGDWANSITNCTINNSQVFWLLDKRLSQRNHFPT 448
Query: 555 VD 560
D
Sbjct: 449 FD 450
>UniRef50_A4XBZ2 Cluster: Putative uncharacterized protein; n=2;
Salinispora|Rep: Putative uncharacterized protein -
Salinispora tropica CNB-440
Length = 231
Score = 36.7 bits (81), Expect = 0.41
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 321 ALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFA 494
+L+GR+ S GY LA + + + T AG++ S +AV V A PA + FA
Sbjct: 110 SLVGRLESTAGYADALADWIEGSRHALARTLAGALGSTEAVAVVAATSAPPAASAQFA 167
>UniRef50_A1AMJ4 Cluster: Putative uncharacterized protein; n=1;
Pelobacter propionicus DSM 2379|Rep: Putative
uncharacterized protein - Pelobacter propionicus (strain
DSM 2379)
Length = 275
Score = 36.7 bits (81), Expect = 0.41
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 159 SLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRI 338
S+ +GQ+N +AL + L+ F K + +F DN+++FT+ SE LLGRI
Sbjct: 35 SISFGQINSSELLSLLLALFAIGLSVAFYVKANKISNMFYDNMYKFTKQNSE---LLGRI 91
Query: 339 PSAVGYQ 359
+ G Q
Sbjct: 92 EAGFGEQ 98
>UniRef50_A7QS49 Cluster: Chromosome chr5 scaffold_156, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_156, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 58
Score = 36.7 bits (81), Expect = 0.41
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 93 NDLYHEMKVG-GVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAE 236
NDL+ E+K G+ + SKV +VY MNE A +V LT L + E
Sbjct: 10 NDLHMEIKESRGINKQNISKSKVVIVYDHMNESSRAHTKVGLTTLVMVE 58
>UniRef50_Q8J0G3 Cluster: Vacuolar membrane H-ATPase; n=1;
Zygosaccharomyces bisporus|Rep: Vacuolar membrane
H-ATPase - Zygosaccharomyces bisporus
Length = 533
Score = 36.7 bits (81), Expect = 0.41
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFID 281
+ +LV N P AR TG+TLAE+FRD +G+D+ + D
Sbjct: 492 RTTLVANTSNMPVAAREASIYTGITLAEYFRD-QGKDISMIAD 533
>UniRef50_A7U5X6 Cluster: ATP synthase beta subunit; n=3;
Rhizobiales|Rep: ATP synthase beta subunit -
Mesorhizobium plurifarium
Length = 158
Score = 35.9 bits (79), Expect = 0.71
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 AHHGTDKQCGESSRWILCFCRRRGEDARGERSLP-*NESRRRYYRRL*NFQGLLGLRADE 181
A GTD+Q + +R +L RRR R +R L + R+ R QG LR DE
Sbjct: 53 ADPGTDQQRRQGARRLLGVRRRRRAHPRRQRPLSRVHRIGRQQEGRRSGLQGRARLRPDE 112
Query: 182 RTARCQS*GCSHRVDTSRAFQRQGGTGCTVIY**YLQIHAG 304
RTA R R F R G G V+ +L +HAG
Sbjct: 113 RTAGRARPRRPDRPHRRRIFPRP-GPGRAVLRRQHLPLHAG 152
>UniRef50_A5TX87 Cluster: Transcription termination factor Rho; n=3;
Fusobacterium nucleatum|Rep: Transcription termination
factor Rho - Fusobacterium nucleatum subsp. polymorphum
ATCC 10953
Length = 413
Score = 35.9 bits (79), Expect = 0.71
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +3
Query: 249 KEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTK-AGSI 425
++G++V++ +D++ R +A + V G++ S G PT N K GS+
Sbjct: 245 EDGENVVILLDSLTRLARAYNIVMPSSGKLLSG-GIDPTALYHPKNFFGAARNIKNGGSL 303
Query: 426 TSVQAVYVPADDLTDPAPATTFAHLDATTV-LSRAIAELGVYPAVD 560
T + + V D F + L R +AE ++PA+D
Sbjct: 304 TIIATILVDTGSKMDEVIYEEFKSTGNCDIYLDRQLAEFRIFPAID 349
>UniRef50_A7M2K2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 765
Score = 35.5 bits (78), Expect = 0.94
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKE-GQDVLLFIDNIFRFTQA 305
+TD ++ ++ +EP A V + G+ L + R E G DV++F+D+I R +A
Sbjct: 563 VTDMARSVNAEVIASTFDEP--AERHVKIAGIVLEKAKRLVECGHDVVIFLDSITRLARA 620
Query: 306 GSEVSALLGRIPS 344
+ VS G++ S
Sbjct: 621 YNTVSPASGKVLS 633
>UniRef50_Q29I76 Cluster: GA11481-PA; n=1; Drosophila
pseudoobscura|Rep: GA11481-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1659
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 330 GRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAP 479
G+ P + P L T N +R K G++ S +VYVP +D+++P P
Sbjct: 1313 GQKPFKCSHCPLLFTTKSNC-DRHLLRKHGNVESAMSVYVPTEDVSEPIP 1361
>UniRef50_O46205 Cluster: Zinc-finger nuclear protein hindsight; n=4;
Drosophila melanogaster|Rep: Zinc-finger nuclear protein
hindsight - Drosophila melanogaster (Fruit fly)
Length = 1920
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 330 GRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAP 479
G+ P + P L T N +R K G++ S +VYVP +D+++P P
Sbjct: 1472 GQKPFKCSHCPLLFTTKSNC-DRHLLRKHGNVESAMSVYVPTEDVSEPIP 1520
>UniRef50_P0AG33 Cluster: Transcription termination factor rho;
n=127; Bacteria|Rep: Transcription termination factor
rho - Shigella flexneri
Length = 419
Score = 34.7 bits (76), Expect = 1.6
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+T+ + K +V +EP +VA + A+ + + +DV++ +D+I R +A
Sbjct: 216 VTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHK-KDVIILLDSITRLARAY 274
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ V G++ + L + GS+T + + D
Sbjct: 275 NTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE 334
Query: 489 FAHLDATTV-LSRAIAELGVYPAVD 560
F + LSR IAE V+PA+D
Sbjct: 335 FKGTGNMELHLSRKIAEKRVFPAID 359
>UniRef50_Q57983 Cluster: Probable modification methylase MJ0563;
n=2; Euryarchaeota|Rep: Probable modification methylase
MJ0563 - Methanococcus jannaschii
Length = 310
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +3
Query: 144 KTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSA 323
K KV ++ G P +A + L ++DK G+ VL +ID + FTQ ++
Sbjct: 64 KNEKVDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIF 123
Query: 324 LLGRIPSAVGYQPTLATDMGNMQERI 401
++ +P + L G++ ++
Sbjct: 124 VMENVPQIKEIKDELKKLFGDIGHKV 149
>UniRef50_A7H9J7 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=4;
Cystobacterineae|Rep: H+transporting two-sector ATPase
alpha/beta subunit central region - Anaeromyxobacter sp.
Fw109-5
Length = 364
Score = 34.3 bits (75), Expect = 2.2
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD + K +V + P VA L A+ + G+DV++ +D+I R ++A
Sbjct: 164 VTDMKRNIKGEVVGSSNDRPTEEHIHVAEMVLERAKRLVEG-GKDVVILLDSITRLSRAY 222
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
++ GR + L + GS+T + + D
Sbjct: 223 NKEVESSGRTLTGGVDSRALERPKRLFGSARKAEEGGSLTIIATALIDTGSRMDEVIFEE 282
Query: 489 FAHL-DATTVLSRAIAELGVYPAVD 560
F + VLSR +AE ++PA+D
Sbjct: 283 FKGTGNMEVVLSRQLAERRIFPAID 307
>UniRef50_Q17NB2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 704
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -3
Query: 364 VGWYPTADGILPSKADTSDPACVNLKILSINNSTSCPSLSLKCSAS 227
+ W+ DG P +D SD C N + S N T+CP+LS +C S
Sbjct: 484 ISWFFVCDG-RPDCSDASDEEC-NFSLKS--NITNCPALSFRCEKS 525
>UniRef50_A5DQ83 Cluster: Predicted protein; n=1; Pichia
guilliermondii|Rep: Predicted protein - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 264
Score = 34.3 bits (75), Expect = 2.2
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = -3
Query: 568 SSGSTAGYTPSSAI-ARDRTVVASR*ANVVAGAGSVRSSAGTYTACTL--VMEPALVVVI 398
S+ S A + +SA A VAS A VA A S +S+A +A ++ V A +
Sbjct: 93 SAASAASVSAASAASAASAASVAS--ATSVASAASAKSAASVASAASVASVAAAASAASV 150
Query: 397 RSCILPMSVASVGWYPTADGI--LPSKADTSDPACVNLKILSINNSTSCPSLSLKCSAS 227
S SVAS PT DG + + A + A + +I+NST S S+ S S
Sbjct: 151 ASAASAASVASAKAKPTLDGFKGVVAVASRNATASLTKAPYAISNSTWANSTSVHSSKS 209
>UniRef50_Q4T7C6 Cluster: Chromosome undetermined SCAF8147, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8147,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 574
Score = 33.9 bits (74), Expect = 2.9
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -3
Query: 424 MEPALVVVIRSCILPMSVASVGWYP---TADGILPSKADTSDPACVNLKILSINNSTSCP 254
+ P L ++ S LP+ A+ G P ++ GI S + + + + +L +L +N+ST+C
Sbjct: 317 LPPGLAPLV-SLALPVYAATPGPLPQVFSSPGINRSCSASFNQSLRDLALLDLNSSTACV 375
Query: 253 SLSLKCSASVNPVRATLALA 194
L SAS++ R T +A
Sbjct: 376 ELQRSSSASISLTRDTQVVA 395
>UniRef50_Q8F7C5 Cluster: Transcription termination factor rho;
n=54; cellular organisms|Rep: Transcription termination
factor rho - Leptospira interrogans
Length = 482
Score = 33.9 bits (74), Expect = 2.9
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD + + +V +EP +VA + A+ + G+DV++ +D+I R +A
Sbjct: 279 VTDMARHVRGEVVSSTFDEPAQRHVQVAEMVIEKAKRLVE-HGKDVVILLDSITRLARAY 337
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
++V G+I S L + GS+T + + D
Sbjct: 338 NQVIPTSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEE 397
Query: 489 FAHLDATTV-LSRAIAELGVYPAVD 560
F + L R +++ ++PA+D
Sbjct: 398 FKGTGNMEIHLDRKLSDKRIFPAID 422
>UniRef50_A1R6E4 Cluster: Putative lipoprotein; n=1; Arthrobacter
aurescens TC1|Rep: Putative lipoprotein - Arthrobacter
aurescens (strain TC1)
Length = 403
Score = 33.9 bits (74), Expect = 2.9
Identities = 28/97 (28%), Positives = 41/97 (42%)
Frame = -3
Query: 481 AGAGSVRSSAGTYTACTLVMEPALVVVIRSCILPMSVASVGWYPTADGILPSKADTSDPA 302
A G+V S LV+ P L++ + +C LP P+ DG+ P S PA
Sbjct: 4 AKGGAVMKSRSREHLIGLVLCPVLMLGLSAC-LP---------PSTDGLSPGSNPASPPA 53
Query: 301 CVNLKILSINNSTSCPSLSLKCSASVNPVRATLALAP 191
+ NST+ S S ++ P + T A AP
Sbjct: 54 APEANASASPNSTTANSTSSNSASQDTPAQDTSASAP 90
>UniRef50_A4S446 Cluster: MFS family transporter: multidrug efflux;
n=2; Ostreococcus|Rep: MFS family transporter: multidrug
efflux - Ostreococcus lucimarinus CCE9901
Length = 506
Score = 33.9 bits (74), Expect = 2.9
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = -3
Query: 538 SSAIARDRTVVASR*ANVVAGAGSVRSSAGTYTACTLVMEPALVVVIRSCILPMSVASVG 359
+S +A A A +GA + R+ G ++ +PAL +V + + A+ G
Sbjct: 98 ASGVAHAIATAAFAMARTTSGAFAARACQGLADGMVVMQKPALALVSDETNVARAFATTG 157
Query: 358 W-YPTADGILPSKADTSDPACVNLKILSINNSTSCPS 251
Y A + P+ A C N K CP+
Sbjct: 158 VAYGVASALAPALAAALSEPCENWKAFEGERGARCPT 194
>UniRef50_Q92HL2 Cluster: Transcription termination factor rho;
n=164; cellular organisms|Rep: Transcription termination
factor rho - Rickettsia conorii
Length = 458
Score = 33.9 bits (74), Expect = 2.9
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD ++ + +V +EP ++A + A+ + + +DV++ +D I R +A
Sbjct: 248 VTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHK-KDVVILVDAITRLARAY 306
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ V G++ + L GS+T + + D
Sbjct: 307 NTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMDEVIFEE 366
Query: 489 FAHL-DATTVLSRAIAELGVYPAVD 560
F ++ VL R IA+ +YPA+D
Sbjct: 367 FKGTGNSEIVLDRKIADKRIYPAID 391
>UniRef50_Q5Z0T1 Cluster: Putative Mce family protein; n=1; Nocardia
farcinica|Rep: Putative Mce family protein - Nocardia
farcinica
Length = 342
Score = 33.5 bits (73), Expect = 3.8
Identities = 32/116 (27%), Positives = 52/116 (44%)
Frame = +3
Query: 15 ELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPG 194
EL+ N+ A G FAG R D +H++++ + Y V + G + PG
Sbjct: 208 ELLGNLGPAFDGGGEFAGATIRIL---DQFHDIRILRTDQNRYDVG-VGALTGSIL--PG 261
Query: 195 ARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
V+ G LAE D + + + R Q+G+E+ LLGR+ +A+ P
Sbjct: 262 LATTVSTAGEELAEA-TDMLAPMLAVLAQMVPRPAQSGAELRELLGRLRAAMPETP 316
>UniRef50_Q2W882 Cluster: Autotransporter adhesin; n=3;
Magnetospirillum|Rep: Autotransporter adhesin -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 2130
Score = 33.5 bits (73), Expect = 3.8
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Frame = +3
Query: 120 GGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFT 299
G +T + + + G PPG + A T F D + D L + +
Sbjct: 1711 GSTVTANIVVNSAPVAAGGALTPPGGQVGAAYTFAIPNGTFTDPDAGDTLSYSASGL--- 1767
Query: 300 QAGSEVSALLGRI---PSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTD 470
G ++A G I PSA G T + T TK GSIT +QA PA
Sbjct: 1768 PTGLTINATTGAISGNPSAAGTASVTITATDS--HGATATKTGSIT-IQAAPAPA----- 1819
Query: 471 PAPATT 488
PAPA T
Sbjct: 1820 PAPAPT 1825
>UniRef50_Q55E77 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Dictyostelium discoideum AX4
Length = 3534
Score = 33.5 bits (73), Expect = 3.8
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +3
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI 401
L + +D+ D + + F + + L ++ +Q ++ D+ ++ +
Sbjct: 908 LEVGIQIKDESDVDKDTVVCPVLMFPSTLNSIGYLSALSGDSLYFQESVLADVLTGKDVV 967
Query: 402 T-TTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDF 572
T +TK +S+ +Y+PA D ++ AT V SRAI E +Y +D D+
Sbjct: 968 TFSTKDTEESSLVRIYIPAHKKLDINVILSYTSSGATIVASRAIGEDIIYVHLDADDY 1025
>UniRef50_Q75CH9 Cluster: ACL060Cp; n=1; Eremothecium gossypii|Rep:
ACL060Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 504
Score = 33.5 bits (73), Expect = 3.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 237 HFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 374
H+R+++G + F++ F AG L + + YQPT +T
Sbjct: 305 HYRNRDGSQIYRFVNGKVHFPDAGEPAQLQLHKDGLLIAYQPTFST 350
>UniRef50_O67031 Cluster: Transcription termination factor rho;
n=251; Bacteria|Rep: Transcription termination factor
rho - Aquifex aeolicus
Length = 436
Score = 33.5 bits (73), Expect = 3.8
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332
K +V +EPP +VA + A+ + + +DV++ +D++ RFT+A + V+ G
Sbjct: 242 KAEVVASTFDEPPERHMQVAEIVVEKAKRMVELK-KDVVILMDSLTRFTRASNAVTPPTG 300
Query: 333 RIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATT 512
R+ + + GS+T + V D F
Sbjct: 301 RVLTGGIEITAFQRPKKFFGAARNIEEGGSLTIIATALVETGSKMDDVIYEEFKGTGNME 360
Query: 513 V-LSRAIAELGVYPAVD 560
+ L R + E ++PA++
Sbjct: 361 IHLDRRLMERRIFPAIN 377
>UniRef50_A7T6I1 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 186
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = -3
Query: 469 SVRSSAGTYTACTLVMEPALVVVIRSCILPMSVASVGWYPTADGILPSKADTSDPACVNL 290
++ S T + + M+P+ V + SC+ M + V P+ + PS T DP+CV +
Sbjct: 42 TLNPSCVTMDSSCVTMDPSCVTMDSSCVT-MDPSCVTMDPSCVTLDPSCV-TMDPSCVTM 99
Query: 289 KILSINNSTSCPSLSLKCSASVNPVRATL 203
+ SC ++ C +++P T+
Sbjct: 100 DASCVTMDPSCVTMDPSC-VTMDPSCVTM 127
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = -3
Query: 457 SAGTYTACTLVMEPALVVVIRSCILPMSVASVGWYPTADGILPSKADTSDPACVNLKILS 278
S T A + M+P+ V + SC+ M + V P+ + PS T DP+CV +
Sbjct: 95 SCVTMDASCVTMDPSCVTMDPSCVT-MDPSCVTMDPSCVTMDPSCV-TMDPSCVTMDASC 152
Query: 277 INNSTSCPSLSLKCSASVNPVRATL 203
+ SC ++ C +++P T+
Sbjct: 153 VTMDPSCVTMDPSC-VTMDPSCVTM 176
>UniRef50_Q00174 Cluster: Laminin subunit alpha precursor; n=7;
Diptera|Rep: Laminin subunit alpha precursor - Drosophila
melanogaster (Fruit fly)
Length = 3712
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 198 RARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATD 377
+ ++ T L+ +FR E LL++ N + Q ++ A + GY P L D
Sbjct: 2690 KTKLLATRTNLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVA----VEIVNGY-PILTID 2744
Query: 378 MGNMQERITTTK 413
+GN ERIT+ K
Sbjct: 2745 LGNGPERITSDK 2756
>UniRef50_UPI0000D9D3C2 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 198
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 585 DPRGRSPAGRRLGTHLAQR*PAIGQSLRPDERTSWPVLGQSGHRL 451
DP+ +PAG +G P +G SL P + SW +G H L
Sbjct: 146 DPKPLAPAGSAMGEQSEAHSPGVGPSLNPG-KGSWSGMGTESHFL 189
>UniRef50_A6EG48 Cluster: Possible TonB-dependent receptor; n=1;
Pedobacter sp. BAL39|Rep: Possible TonB-dependent
receptor - Pedobacter sp. BAL39
Length = 795
Score = 32.7 bits (71), Expect = 6.6
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 141 YKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVS 320
Y TS+VS MN P G+ ALT EH+R D+L ++ I +F + G E+
Sbjct: 326 YPTSQVSS--SMMNNPDGSFRWNALTQTEGDEHWR-----DLLYNLNYIHKFNKEGHELK 378
Query: 321 ALLGRIPSAVGYQPTLAT---DMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
A + + L T D + R + ++ G I S +Y D T P T+
Sbjct: 379 ADVDYVYHFSRMNQLLDTRYVDASSSPVRPSASRRGDIPSNNDIYATKLDYTLPLSKTS 437
>UniRef50_A3TNY9 Cluster: Zinc-binding dehydrogenase; n=5;
Actinomycetales|Rep: Zinc-binding dehydrogenase -
Janibacter sp. HTCC2649
Length = 355
Score = 32.7 bits (71), Expect = 6.6
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 192 GARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLA 371
GA V ++ +LA+ + + G DV+L TQA V+A GR+ TLA
Sbjct: 218 GATKTVDVSSKSLADAYAGRPGPDVVLECSGHEGSTQAAIRVAAPAGRVVLIGMGGDTLA 277
Query: 372 TDMGNMQER 398
+G++Q R
Sbjct: 278 LPLGDVQNR 286
>UniRef50_Q9FL22 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MPL12; n=2; Arabidopsis
thaliana|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MPL12 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1022
Score = 32.7 bits (71), Expect = 6.6
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 286 SSDSRRPGQRYRPCLGGYHPLSGTSQHWPRTWVICRN--VSPPLKLAPSRACRQYTSQPM 459
SS S+ P +++ HP+ TS +P++ + ++ VSPP P C+ TSQ
Sbjct: 789 SSTSQNPQNQFQNSALQMHPVVQTSNAYPQSQIHGQHMIVSPPESQNPQNQCQNSTSQVQ 848
Query: 460 T 462
T
Sbjct: 849 T 849
>UniRef50_Q6EUF7 Cluster: Disease resistance protein Cf-2.1-like;
n=1; Oryza sativa (japonica cultivar-group)|Rep: Disease
resistance protein Cf-2.1-like - Oryza sativa subsp.
japonica (Rice)
Length = 719
Score = 32.7 bits (71), Expect = 6.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 285 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDM--GNMQERITTTKAGSITSVQAVYVPAD 458
+F + G+ +S G +P +G P L + GN E + G+I S++ ++ A+
Sbjct: 156 VFNLSLQGNRIS---GTVPKELGRMPFLKSINLEGNQLEGHIPPEFGNIISLERFFISAN 212
Query: 459 DLTDPAPATTFAHLDATT 512
D+T P +TF+ L T
Sbjct: 213 DITGELP-STFSRLTNMT 229
>UniRef50_A2X2Q7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 944
Score = 32.7 bits (71), Expect = 6.6
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 282 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM--GNMQERITTTKAGSITSVQAVYVPA 455
N+ T + + + G +P +G P L + GN E + G+I S++ ++ A
Sbjct: 129 NLTYLTNLSLQGNRISGTVPKELGRMPFLKSINLEGNQLEGHIPPEFGNIISLERFFISA 188
Query: 456 DDLTDPAPATTFAHLDATTVL 518
+D+T P +TF+ L T L
Sbjct: 189 NDITGELP-STFSRLTNMTDL 208
>UniRef50_Q7PNR2 Cluster: ENSANGP00000021704; n=3; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021704 - Anopheles gambiae
str. PEST
Length = 1289
Score = 32.7 bits (71), Expect = 6.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Frame = +3
Query: 24 NNVAKAHGGFSV---FAGVGERTR-EGNDLYHEMKVGGVITDDYK-----TSKVSLVYGQ 176
NN A GGF+ F V E GN LYH VG V+ + ++ + V + YG+
Sbjct: 622 NNFASLVGGFNTAFPFRDVPEEILCSGNVLYHGQPVGIVVAESFECAAEAATMVKMTYGE 681
Query: 177 MNEPP 191
N+ P
Sbjct: 682 SNDEP 686
>UniRef50_O76602 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1275
Score = 32.7 bits (71), Expect = 6.6
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Frame = -3
Query: 583 PSR*KSSGSTAGYTPSSAIARDRTV------VASR*ANVVAGAGSVRSSAGTYTA--CTL 428
PS ++ ST PS+ + + TV VA+ VV +V + T T+
Sbjct: 332 PSTVVTAPSTVVTVPSTVVTKPNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTV 391
Query: 427 VMEPALVVVIRSCI--LPMSV----ASVGWYPTADGILPSKADTSDPACVNLKILSINNS 266
V P+ VV S + +P +V ++V PT G PS A TS + SI S
Sbjct: 392 VTNPSTVVTAPSTVVTVPTTVMTSRSTVITTPTTGGSSPSTAGTSLASTAVTTETSI-GS 450
Query: 265 TSCPSLSLKCSASVNPVRATLALAPGGSFICP*TKE-TLEVL*SSVITPPTFISW*RSFP 89
+S P S S S++ + + P T++ T + +S+ + PT ++ S
Sbjct: 451 SSTPLPSQSTSLSMSSLSTYTPSSSTAGATSPATQQSTKPTIGTSMSSGPTTVAPGASTE 510
Query: 88 SRVL-SPTPAKT 56
S VL S TP+ T
Sbjct: 511 STVLQSSTPSGT 522
>UniRef50_A7ETU8 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 500
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 376 SVASVGWYPTADGILPSKADTSDPACVNLKILSINNSTSCPSL 248
S +SV PT P A T+ N+ SI++ST+CPSL
Sbjct: 191 SYSSVSNAPTTSIYTPRTASTTSVVVTNIDNTSISSSTACPSL 233
>UniRef50_P52157 Cluster: Transcription termination factor rho;
n=14; Bacteria|Rep: Transcription termination factor rho
- Streptomyces lividans
Length = 707
Score = 32.7 bits (71), Expect = 6.6
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
+TD ++ K ++ + P VA + A+ + G DV++ +D+I R +A
Sbjct: 496 VTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVEL-GHDVVVLLDSITRLGRAY 554
Query: 309 SEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATT 488
+ + GRI S L GS+T + V D
Sbjct: 555 NLAAPASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEE 614
Query: 489 FAHL-DATTVLSRAIAELGVYPAVD 560
F +A L R +A+ ++PAVD
Sbjct: 615 FKGTGNAELKLDRKLADKRIFPAVD 639
>UniRef50_Q3UUA2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330078D03
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330078D03
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 109
Score = 32.3 bits (70), Expect = 8.7
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +1
Query: 247 TRRDRMYCYLLIISSDSRRPGQRYRPCLGGYHPLSGTSQHWPRTWVICRNVSPPLKLA-- 420
T R R +C++L DS +PG GY L W R WV+C PL LA
Sbjct: 25 TCRWRTHCHVL--HRDSEKPGSLGTSSAVGYCNLVLLKDQWARAWVLCGRW--PLHLARQ 80
Query: 421 --PSRACRQYTS 450
P + C +S
Sbjct: 81 MPPEQLCSHNSS 92
>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
Clostridiales|Rep: Transcription termination factor Rho
- Clostridium phytofermentans ISDg
Length = 650
Score = 32.3 bits (70), Expect = 8.7
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
Frame = +3
Query: 129 ITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAG 308
I + + V ++Y +E P RV+ + A+ + + +DV++ +D+I R +A
Sbjct: 445 IKESIEGGNVEVIYSTFDELPENHKRVSEMVIERAKRLVEHK-KDVVILLDSITRLARAY 503
Query: 309 SEVSALLGRIPSAVGYQPT-LATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPAT 485
+ GR S G P L + GS+T + V D
Sbjct: 504 NLTVQASGRTLSG-GLDPAALHMPKKFFGAARNMREGGSLTILATALVETGSRMDDVVFE 562
Query: 486 TFAHL-DATTVLSRAIAELGVYPAVD 560
F + VL R ++E ++PA+D
Sbjct: 563 EFKGTGNMELVLDRNLSEKRIFPAID 588
>UniRef50_A7CZI2 Cluster: H+transporting two-sector ATPase
alpha/beta subunit central region; n=1; Opitutaceae
bacterium TAV2|Rep: H+transporting two-sector ATPase
alpha/beta subunit central region - Opitutaceae
bacterium TAV2
Length = 403
Score = 32.3 bits (70), Expect = 8.7
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 2/143 (1%)
Frame = +3
Query: 138 DYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKE-GQDVLLFIDNIFRFTQAGSE 314
D+K S + V+ N+ + + + L + R E G+DV+LF+D++ R +A
Sbjct: 204 DFKRSVPAEVWASSNDE-NVESHIRIADLCIERARRLVEAGKDVVLFLDSLTRLARA-HN 261
Query: 315 VSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFA 494
GR S L T GS+T V ++ + D F
Sbjct: 262 TQRNSGRTGSGGLDVRALEKPRQLFASARNTEDGGSLTIVASILIETGSRMDDVIFQEFK 321
Query: 495 HL-DATTVLSRAIAELGVYPAVD 560
+ VL R AE+ ++PA++
Sbjct: 322 GTGNMELVLDRKCAEMRLWPAMN 344
>UniRef50_A3Y7V9 Cluster: Allophanate hydrolase subunit 2; n=1;
Marinomonas sp. MED121|Rep: Allophanate hydrolase
subunit 2 - Marinomonas sp. MED121
Length = 1240
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 170 VNQGDLGSFIVVCNNASDFHFMVEIVPLARPLP 72
++QG +G+ VVC A D +VE+ PLA +P
Sbjct: 815 IHQGKIGNDEVVCRLAGDHFLLVELGPLALDIP 847
>UniRef50_Q4DPQ2 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 249
Score = 32.3 bits (70), Expect = 8.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 384 NMQERITTTKAGSITSVQAVYVPADDLTDPAPATTF-AHLD-ATTVLSRAIAEL 539
NM+ R +T +AG Q ++ L +PAP T H D A TVL+ +I L
Sbjct: 172 NMESRFSTMQAGLSLQTQRLHSEWSGLQEPAPGTAVDDHADNAATVLAASIERL 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,776,991
Number of Sequences: 1657284
Number of extensions: 15023825
Number of successful extensions: 46744
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 44400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46595
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -