Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D15
(591 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 332 3e-92
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 69 5e-13
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 56 4e-09
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 28 0.89
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 28 1.2
SPBC1709.09 |||mitochondrial translation termination factor|Schi... 27 1.5
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 4.7
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 25 6.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 6.2
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 25 8.3
>SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 525
Score = 332 bits (815), Expect = 3e-92
Identities = 163/189 (86%), Positives = 175/189 (92%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
V I ELINN+AKAHGG+SVF GVGERTREGNDLY EM+ GVI + + SK +LV+GQMN
Sbjct: 211 VFIQELINNIAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLEGE-SKAALVFGQMN 269
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGARARVALTGLT+AE+FRD EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP
Sbjct: 270 EPPGARARVALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 329
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLATDMG MQERITTTK GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR+I+ELG
Sbjct: 330 TLATDMGAMQERITTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELG 389
Query: 543 VYPAVDPLD 569
+YPAVDPLD
Sbjct: 390 IYPAVDPLD 398
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 68.9 bits (161), Expect = 5e-13
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Frame = +3
Query: 57 VFAGVGERTREGNDL---YHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLT 227
V+ G GER E ++ + E+ + + + +LV N P AR TG+T
Sbjct: 281 VYVGCGERGNEMAEVLMDFPELTIDINGKPEPIMKRTTLVANTSNMPVAAREASIYTGIT 340
Query: 228 LAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI-- 401
LAE++RD +G++V + D+ R+ +A E+S L +P+ GY L + + ER
Sbjct: 341 LAEYYRD-QGKNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGAKLASFYERAGR 399
Query: 402 -----TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+ + G+++ V AV P D +DP + T + L + +A+ +P+++
Sbjct: 400 ARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSIN 457
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 56.0 bits (129), Expect = 4e-09
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +3
Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332
+V+L N+P R L+ +E + + VL + ++ + A EVSA
Sbjct: 234 RVTLFLNLANDPTIERIITPRLALSASEFLAYQTEKHVLTILTDMTSYADALREVSAARE 293
Query: 333 RIPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAHLDA 506
+P GY + TD+ + ER + GSIT + + +P DD+T P P T +
Sbjct: 294 EVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEG 353
Query: 507 TTVLSRAIAELGVYPAVDPL 566
+ R + +YP ++ L
Sbjct: 354 QIFVDRQLHNNAIYPPINVL 373
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 28.3 bits (60), Expect = 0.89
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 408 TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGV 545
TKAG++ + V + DPA A +L+ +V RA A LG+
Sbjct: 439 TKAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVKLRASAILGL 484
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 373 VASVGWYPTADGILPSKADTS 311
V SV W+PT + IL S AD+S
Sbjct: 271 VMSVDWHPTKEMILSSSADSS 291
>SPBC1709.09 |||mitochondrial translation termination
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/41 (21%), Positives = 21/41 (51%)
Frame = +3
Query: 390 QERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATT 512
QE + G+ T ++A+++P+ + P P+ + A +
Sbjct: 78 QEAVVLPSQGNFTQLEALFIPSKSIKAPTPSRLLREIAAVS 118
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 328 SKADTSDPACVNLKILSINNSTSCPSL-SLKCSASVNPVRATLALAPGGSFI 176
S +D S VNL+ +++ NSTS ++ S K S+ V T+ L G +I
Sbjct: 280 SSSDDSTFYSVNLESITVTNSTSSNNVQSSKRSSKDIEVNTTVTLDTGTVYI 331
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 131 NNASDFHFMVEIVPLARPLPYAGKNRES 48
NN D+H +V+++P L ++GK +S
Sbjct: 832 NNLLDYHVIVDLLPKLAHLYFSGKFPDS 859
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 6.2
Identities = 28/123 (22%), Positives = 46/123 (37%)
Frame = -3
Query: 568 SSGSTAGYTPSSAIARDRTVVASR*ANVVAGAGSVRSSAGTYTACTLVMEPALVVVIRSC 389
++ +TA + S+ T + S + A + S SS+ Y +L+ S
Sbjct: 235 TTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSS 294
Query: 388 ILPMSVASVGWYPTADGILPSKADTSDPACVNLKILSINNSTSCPSLSLKCSASVNPVRA 209
+ S P + T+ + L +S NST+ S S +SVN A
Sbjct: 295 ANSTTATSASSTPLTS---VNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTA 351
Query: 208 TLA 200
T A
Sbjct: 352 TSA 354
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 408 TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 518
T G IT A+Y P D ++ HL AT L
Sbjct: 766 TVGGLITGASAIYTPEDGISLDMLRKDIDHLKATFAL 802
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,598,386
Number of Sequences: 5004
Number of extensions: 55012
Number of successful extensions: 180
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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