Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D15
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 351 3e-97
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 84 6e-17
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 60 1e-09
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 54 8e-08
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 33 0.20
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.81
AF039037-1|AAO21431.1| 312|Caenorhabditis elegans Hypothetical ... 30 1.1
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 30 1.1
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.3
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 28 4.3
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical ... 28 4.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.3
AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical... 28 4.3
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 5.7
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 5.7
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 5.7
AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical... 28 5.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z83123-12|CAI70411.1| 329|Caenorhabditis elegans Hypothetical p... 27 10.0
Z83123-11|CAB05610.3| 335|Caenorhabditis elegans Hypothetical p... 27 10.0
Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical p... 27 10.0
AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical ... 27 10.0
AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine r... 27 10.0
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 351 bits (862), Expect = 3e-97
Identities = 171/189 (90%), Positives = 178/189 (94%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182
VLIMELINNVAKAHGG+SVFAGVGERTREGNDLYHEM GGVI K SKVSLVYGQMN
Sbjct: 223 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMN 282
Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362
EPPGARARV LTGLT+AE+FRD+EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP
Sbjct: 283 EPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 342
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
TLATDMG+MQERITTTK GSITSVQA+YVPADDLTDPAPATTFAHLDATTVLSR IAEL
Sbjct: 343 TLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELA 402
Query: 543 VYPAVDPLD 569
+YPAVDPLD
Sbjct: 403 IYPAVDPLD 411
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 84.2 bits (199), Expect = 6e-17
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHE-----MKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTG 221
++ G GER E +++ + M+V GV T K + +LV N P AR TG
Sbjct: 262 IYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMK--RTALVANTSNMPVAAREASIYTG 319
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI 401
+TLAE+FRD G +V + D+ R+ +A E+S LG +P+ GY LA + + ER
Sbjct: 320 ITLAEYFRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERA 378
Query: 402 TTTKA-------GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
K GS+T V AV P D DP + T + L + +A+ +P+++
Sbjct: 379 GRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSIN 438
Query: 561 PLDFYLE 581
L Y E
Sbjct: 439 WLISYSE 445
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Frame = +3
Query: 156 VSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGR 335
V L N+P R LT AE F G+ VL+ + ++ + +A E+SA
Sbjct: 249 VCLFLNLANDPTIERIITPRIALTAAEFFAYHCGKHVLVVLTDMSSYAEALREISAAREE 308
Query: 336 IPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAHLDAT 509
+P G+ + TD+ + ER K GSIT + + +P +D+T P P T +
Sbjct: 309 VPGRRGFPGYMYTDLATIYERAGRVKGREGSITQIPILTMPNNDITHPIPDLTGYITEGQ 368
Query: 510 TVLSRAIAELGVYPAVDPL 566
+ + + + +YP +D L
Sbjct: 369 IYIDKQLHKRLIYPPIDVL 387
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 54.0 bits (124), Expect = 8e-08
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = +3
Query: 156 VSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGR 335
V L N+P R LT AE + + VL+ + ++ + +A EVSA
Sbjct: 237 VCLFLNLANDPTIERIITPRIALTSAEFLAYQCKKHVLVVLTDMSSYAEALREVSAAREE 296
Query: 336 IPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAHLDAT 509
+P G+ + TD+ + ER + GSIT + + +P DD+T P P T +
Sbjct: 297 VPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDITHPIPDLTGYITEGQ 356
Query: 510 TVLSRAIAELGVYPAVDPL 566
+ R + +YP ++ L
Sbjct: 357 IYVDRQLHNRLIYPPINVL 375
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +3
Query: 216 TGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE 395
+G + EHFRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 250 SGCAMGEHFRD-NGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 308
Query: 396 RI----TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
R + GS+T++ + A D++ P + D L + GV PA++
Sbjct: 309 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 367
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +3
Query: 216 TGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE 395
+G + EHFRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 242 SGCAMGEHFRD-NGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 300
Query: 396 RI----TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
R + GS+T++ + A D++ P + D L + GV PA++
Sbjct: 301 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 359
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +3
Query: 216 TGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQE 395
+G + EHFRD G+ L+ D++ + A ++S LL R P Y + + E
Sbjct: 277 SGCAMGEHFRD-NGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 335
Query: 396 RI----TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
R + GS+T++ + A D++ P + D L + GV PA++
Sbjct: 336 RAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAIN 394
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 32.7 bits (71), Expect = 0.20
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Frame = -3
Query: 583 PSR*KSSGSTAGYTPSSAIARDRTV------VASR*ANVVAGAGSVRSSAGTYTA--CTL 428
PS ++ ST PS+ + + TV VA+ VV +V + T T+
Sbjct: 332 PSTVVTAPSTVVTVPSTVVTKPNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTV 391
Query: 427 VMEPALVVVIRSCI--LPMSV----ASVGWYPTADGILPSKADTSDPACVNLKILSINNS 266
V P+ VV S + +P +V ++V PT G PS A TS + SI S
Sbjct: 392 VTNPSTVVTAPSTVVTVPTTVMTSRSTVITTPTTGGSSPSTAGTSLASTAVTTETSI-GS 450
Query: 265 TSCPSLSLKCSASVNPVRATLALAPGGSFICP*TKE-TLEVL*SSVITPPTFISW*RSFP 89
+S P S S S++ + + P T++ T + +S+ + PT ++ S
Sbjct: 451 SSTPLPSQSTSLSMSSLSTYTPSSSTAGATSPATQQSTKPTIGTSMSSGPTTVAPGASTE 510
Query: 88 SRVL-SPTPAKT 56
S VL S TP+ T
Sbjct: 511 STVLQSSTPSGT 522
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 0.81
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 339 PSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 518
PS+ T+ TTT AGS T++Q +++ T + TT + T+
Sbjct: 680 PSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTTTISDTSTTSSS 739
Query: 519 -SRAIAELGVYPAVDPLDFYLE 581
S A+ +VD DF L+
Sbjct: 740 PSSTTADSTSTLSVDQFDFILD 761
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 0.81
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 339 PSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 518
PS+ T+ TTT AGS T++Q +++ T + TT + T+
Sbjct: 680 PSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTTTISDTSTTSSS 739
Query: 519 -SRAIAELGVYPAVDPLDFYLE 581
S A+ +VD DF L+
Sbjct: 740 PSSTTADSTSTLSVDQFDFILD 761
>AF039037-1|AAO21431.1| 312|Caenorhabditis elegans Hypothetical
protein R02C2.1 protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 123 GVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFID 281
G++ D K + LVY + + PG + +T LA +R K+G++++L D
Sbjct: 139 GIVHRDIKLENLLLVYSESEDDPGT---LKITDFGLATKYR-KDGEEIMLSED 187
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 337 YHPLSGTSQHWPRTWVICRNVSPPLKLAPSRACRQYTSQPMT*LTQHRPRRS-LIWTQRL 513
+H + Q R +ICR PP +L +R +++ + +H PR+S L WT
Sbjct: 578 HHAMMMAQQQTNRV-LICRQCKPPQRLTTARQIKEHRA-------RHLPRKSHLCWTCHK 629
Query: 514 SYRGLSL 534
S+R L
Sbjct: 630 SFRTAQL 636
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 354 YQPTLATDMG--NMQERITTTKAGSITSVQ-AVYVPADDLTDPAPATTFAHLDATTV 515
Y PT T + TTT+A + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 543 VYPAVDPLDFY 575
V P+ +
Sbjct: 231 PIKTVPPVKVF 241
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYV-PADDLTDPAPATTFAHLDATTVLSRAIAEL 539
T T + +R+TTTKA ++ + V V PA T P T+ A L+ TT +R A++
Sbjct: 332 TKRTTTRSTTKRLTTTKATTVLTTTPVKVTPA---TTTLPTTSLA-LETTTTATRTTAKI 387
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 274 NNSTSCPSLSLKCSASVNPVRATLALAPGG 185
N++T C S L C+ASVN V+ L+ + GG
Sbjct: 67 NSNTDCRS-GLYCTASVNGVKICLSTSNGG 95
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 274 NNSTSCPSLSLKCSASVNPVRATLALAPGG 185
N++T C S L C+ASVN V+ L+ + GG
Sbjct: 67 NSNTDCRS-GLYCTASVNGVKICLSTSNGG 95
>AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical
protein C01B4.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 192 GARARVALTGLTLAE-HFRDKEG--QDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 350
G A + G TLA+ F DK G QD++L D I F + + + +GR+ + +
Sbjct: 13 GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRI 68
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +3
Query: 315 VSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFA 494
VS+ ++P QPT+++++G++ + T K +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 495 HLDATTVLSRAIAELGVYPA 554
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
>AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical
protein Y19D10A.16 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 192 GARARVALTGLTLAE-HFRDKEG--QDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 350
G A + G TLA+ F DK G QD++L D I F + + + +GR+ + +
Sbjct: 13 GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRI 68
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 328 SKADTSDPACVNLKILSINNSTSCPSLSLKCSASVNPVRATLALAP 191
SK + C + ++S NN SC S C ++ P + L P
Sbjct: 1918 SKKPEPEIYCDEITVVSENNENSCFSCRYICRCALKPCMFNMTLVP 1963
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 328 SKADTSDPACVNLKILSINNSTSCPSLSLKCSASVNPVRATLALAP 191
SK + C + ++S NN SC S C ++ P + L P
Sbjct: 1821 SKKPEPEIYCDEITVVSENNENSCFSCRYICRCALKPCMFNMTLVP 1866
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -3
Query: 328 SKADTSDPACVNLKILSINNSTSCPSLSLKCSASVNPVRATLALAP 191
SK + C + ++S NN SC S C ++ P + L P
Sbjct: 1832 SKKPEPEIYCDEITVVSENNENSCFSCRYICRCALKPCMFNMTLVP 1877
>AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical
protein Y17G7B.19 protein.
Length = 272
Score = 27.9 bits (59), Expect = 5.7
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Frame = +1
Query: 241 SETRRDRMYCYLLIISS---DSRRPGQRYRPCLGGYHPLSGTSQHWPRTWVICR--NVSP 405
S+ + M C ++ S D P + + C GYHPLS +S P++ +C + P
Sbjct: 145 SQNAKSNMCCRDTLVDSLCPDGFTPYRTQQKC-EGYHPLSKSSGKCPKSNGMCHRGHCCP 203
Query: 406 PLKLAPSRACRQYTSQPMT*LTQHRPRRSLIWTQRLSY 519
L + +R Y +T TQ P L + R ++
Sbjct: 204 RLTIDEARKATPYHLNYVT-DTQCDPTEPLDFVYRWAF 240
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = +3
Query: 360 PTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 539
PT T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>Z83123-12|CAI70411.1| 329|Caenorhabditis elegans Hypothetical
protein T04A11.7b protein.
Length = 329
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 317 YL*PGLRESEDIINK*QYILSLLVSEMLC*C 225
Y+ GLR +++I+NK L +++S++ C C
Sbjct: 55 YIVKGLRNNDEIVNK-SVFLVIILSQLSCLC 84
>Z83123-11|CAB05610.3| 335|Caenorhabditis elegans Hypothetical
protein T04A11.7a protein.
Length = 335
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 317 YL*PGLRESEDIINK*QYILSLLVSEMLC*C 225
Y+ GLR +++I+NK L +++S++ C C
Sbjct: 55 YIVKGLRNNDEIVNK-SVFLVIILSQLSCLC 84
>Z74033-10|CAA98478.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 292 LKILSINNSTS--CPSLSLKCSASVNPVRATLALAPGGS 182
+K+LS S + CP + + C+ ++N + L PGG+
Sbjct: 173 VKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGT 211
>AL022272-5|CAA18355.1| 805|Caenorhabditis elegans Hypothetical
protein H12C20.2a protein.
Length = 805
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 292 LKILSINNSTS--CPSLSLKCSASVNPVRATLALAPGGS 182
+K+LS S + CP + + C+ ++N + L PGG+
Sbjct: 173 VKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGT 211
>AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine
receptor, class t protein5 protein.
Length = 353
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 268 CYLLIISSDSRRPGQRYRPCLGG 336
CY+ I+SS SR P R LGG
Sbjct: 57 CYIAILSSKSRTPTYRLMIILGG 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,696,760
Number of Sequences: 27780
Number of extensions: 324602
Number of successful extensions: 924
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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