Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D15
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.73 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.73 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   0.97 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.9  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   5.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.2  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   6.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.0  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.0  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 256 PSLSLKCSASVNPV-RATLAL 197
           P++SLKCSA+ NP  + T AL
Sbjct: 437 PAVSLKCSAAGNPTPQVTWAL 457


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -3

Query: 256 PSLSLKCSASVNPV-RATLAL 197
           P++SLKCSA+ NP  + T AL
Sbjct: 437 PAVSLKCSAAGNPTPQVTWAL 457


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 442 YTSQPMT*LTQHRPRRSLIWTQRLSYRGLSLS 537
           Y    M+   Q + +RSL+  Q LS RGL ++
Sbjct: 82  YPHYQMSGAKQKKKKRSLMGAQGLSIRGLQIN 113


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 89  LARPLPYAGKNRESTVSFRHIVY 21
           L  P+ YA  NR+    FR I+Y
Sbjct: 421 LLNPIIYATLNRDFRKPFREILY 443


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 256 PSLSLKCSASVNP 218
           PS+ LKC AS NP
Sbjct: 409 PSMFLKCVASGNP 421


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   LIMELINNVAKAHGGFSVFAGVGERTR-EGNDLY 104
           L++ + + +    GGF  F G+G R +   N+++
Sbjct: 10  LLLAIFSMLVGGFGGFGGFGGLGGRGKCPSNEIF 43


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 367 WPRTWVICRNVSPPLKLAPSR 429
           W R WV+   +S    + PS+
Sbjct: 133 WDRLWVLDNGISGETSVCPSQ 153


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 84  ASSPLRRQKQRIHRE 40
           A SPLRR+K R  RE
Sbjct: 311 AVSPLRREKDRGSRE 325


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 6   LIMELINNVAKAHGGFSVFAGVGERTR-EGNDLY 104
           L++ + + +    GGF  F G+G R +   N+++
Sbjct: 10  LLLAVFSMLVGGFGGFGGFGGLGGRGKCPSNEIF 43


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 478 RPRRSLIWTQRLSYRGLSLS*VCTQPSTRWTSTS 579
           RP+ S   T  + YR  + + + +QPS ++ STS
Sbjct: 413 RPQVSPDRTSPMEYRLYNPALIQSQPSPQYPSTS 446


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -3

Query: 403 VIRSCILPMSVASVGWYPTADGI 335
           VI  C++ +S+    W P  + +
Sbjct: 4   VIVFCLMALSIVDAAWKPLPENL 26


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 388 ILPMSVASVGWYPTADGILPSKADT 314
           I+    A  G+Y TA G+LP    T
Sbjct: 186 IIIYRAAYFGFYDTARGMLPDPKKT 210


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 388 ILPMSVASVGWYPTADGILPSKADT 314
           I+    A  G+Y TA G+LP    T
Sbjct: 186 IIIYRAAYFGFYDTARGMLPDPKKT 210


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -3

Query: 403 VIRSCILPMSVASVGWYPTADGI 335
           VI  C++ +S+    W P  + +
Sbjct: 4   VIVFCLMALSIVDAAWKPLPENL 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,576
Number of Sequences: 438
Number of extensions: 4179
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)