Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D13
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   1.9  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical ...    27   7.6  
Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U64854-4|AAB18314.1|  308|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U29382-4|AAG00002.2|  324|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AC024785-4|AAF60602.3|  466|Caenorhabditis elegans C-type lectin...    27   10.0 

>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 253  IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 375
            IG +DL+    LG A     LDNV+ HG+ L     P  GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 205 GVKVPFAGNDKNIVSAIGSLDLTNRQ 282
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 205 GVKVPFAGNDKNIVSAIGSLDLTNRQ 282
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -1

Query: 317 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 144
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 143 ELVNSSGSS 117
           E ++S   S
Sbjct: 589 ENISSDFES 597


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 101 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 241
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 101 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 241
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 18/70 (25%), Positives = 29/70 (41%)
 Frame = -1

Query: 386  AVTXSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLT 207
            +V   P PG  + +  T    +    T A A PS   + KS +PIA  I  S+     + 
Sbjct: 1096 SVQSIPRPGGIIVMSPTNQTDSAPPPTGAAAKPSRFQVTKSADPIATPISSSISTATVIP 1155

Query: 206  PAPEVPSELS 177
                 P+ ++
Sbjct: 1156 IVAATPTNIT 1165


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 18/70 (25%), Positives = 29/70 (41%)
 Frame = -1

Query: 386  AVTXSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLT 207
            +V   P PG  + +  T    +    T A A PS   + KS +PIA  I  S+     + 
Sbjct: 1096 SVQSIPRPGGIIVMSPTNQTDSAPPPTGAAAKPSRFQVTKSADPIATPISSSISTATVIP 1155

Query: 206  PAPEVPSELS 177
                 P+ ++
Sbjct: 1156 IVAATPTNIT 1165


>AC024805-3|AAK39338.1|  801|Caenorhabditis elegans Hypothetical
           protein Y51H7C.6a protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 73  RYLIVSEPVYYIQHYEEPELLTSSRVRRDAHGAL 174
           R L+ +EP+ +  +Y+   LLTSS + R    +L
Sbjct: 671 RLLVENEPLLFADNYQTLLLLTSSEIARQIEQSL 704


>Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical
           protein T28D6.7 protein.
          Length = 322

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 384 CHLVSEPGDVCIRETYSVAVYIIQCHSSGCSA*FL 280
           CH    P   CIR T  ++ Y+I+    GC   ++
Sbjct: 188 CHEDYPPAKGCIRATVLISGYLIKEKEQGCEVIYI 222


>U64854-4|AAB18314.1|  308|Caenorhabditis elegans Hypothetical
           protein K11C4.1 protein.
          Length = 308

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 459 HISGGESLRCDVVVI-VVEEIHFAGSCHLVSEPGDVCI 349
           H++ G ++   +  +  +EE+H+ G  H   +PG+ C+
Sbjct: 111 HLTLGSAIGASIQCLEALEELHWCGFLHRDVKPGNFCL 148


>U29382-4|AAG00002.2|  324|Caenorhabditis elegans Hypothetical
           protein R03H10.6 protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 373 DXVTAAGKVNLFHNDYHDITAKAFATRNM 459
           D + A  ++N F +DYH I  K    RNM
Sbjct: 250 DVIVAVEEINDFLDDYHPIENKPPVLRNM 278


>AC024785-4|AAF60602.3|  466|Caenorhabditis elegans C-type lectin
           protein 72 protein.
          Length = 466

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
 Frame = +1

Query: 352 THIP----GFGDXVTAAGKVNLFHNDYHDITA 435
           +H+P    GFGD  T +  +++ +N Y+DI++
Sbjct: 234 SHLPDSTLGFGDSTTGSNVLDVINNFYNDISS 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,226,216
Number of Sequences: 27780
Number of extensions: 221789
Number of successful extensions: 626
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)