Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D10
(350 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 62 2e-09
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 62 3e-09
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 59 2e-08
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 50 1e-05
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 47 8e-05
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 43 0.001
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 37 0.083
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 36 0.14
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 36 0.14
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 36 0.19
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 0.58
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 33 1.3
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 33 1.8
UniRef50_Q8XU16 Cluster: Putative phospholipase d/transphosphati... 32 2.4
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 32 3.1
UniRef50_UPI0001555ED1 Cluster: PREDICTED: similar to vomeronasa... 31 5.4
UniRef50_A6W4S9 Cluster: Glycosyl transferase family 2; n=1; Kin... 31 5.4
UniRef50_Q4H1D4 Cluster: RlsA; n=2; Volvox carteri|Rep: RlsA - V... 31 5.4
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 31 5.4
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 31 5.4
UniRef50_Q122Z2 Cluster: Pyruvate carboxyltransferase; n=64; Pro... 31 7.2
UniRef50_A7QKF7 Cluster: Chromosome chr2 scaffold_112, whole gen... 31 7.2
UniRef50_Q56953 Cluster: Chelated iron transport system membrane... 31 7.2
UniRef50_Q9ZIW5 Cluster: LipR activator; n=2; Streptomyces|Rep: ... 30 9.5
UniRef50_A3I5C3 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q4PMJ7 Cluster: Putative secreted salivary protein of t... 30 9.5
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 30 9.5
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 62.5 bits (145), Expect = 2e-09
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLPEATA 289
GTACGKYYRVCTLAI DPGDSDII ++PE T+
Sbjct: 98 GTACGKYYRVCTLAIIDPGDSDIIRSMPEQTS 129
Score = 36.3 bits (80), Expect = 0.14
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +1
Query: 106 LRKSEIEYYALP*PKQGVHHYEWKTIIELG 195
LRKSEIEYYA+ K GVHHY IELG
Sbjct: 71 LRKSEIEYYAML-AKTGVHHYSGNN-IELG 98
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 62.1 bits (144), Expect = 3e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLPEAT 286
GTACGKYYRVCTLAI DPGDSDII ++PE T
Sbjct: 82 GTACGKYYRVCTLAIIDPGDSDIIRSMPEQT 112
Score = 41.1 bits (92), Expect = 0.005
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +1
Query: 94 NAPPLRKSEIEYYALP*PKQGVHHYEWKTIIELG 195
N P LRKSEIEYYA+ K GVHHY IELG
Sbjct: 51 NCPALRKSEIEYYAML-AKTGVHHYSGNN-IELG 82
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 59.3 bits (137), Expect = 2e-08
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLP 277
GTACGKY+RVCTLAITDPGDSDII ++P
Sbjct: 79 GTACGKYFRVCTLAITDPGDSDIIRSMP 106
Score = 41.1 bits (92), Expect = 0.005
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +1
Query: 94 NAPPLRKSEIEYYALP*PKQGVHHYEWKTIIELG 195
N P LRKSEIEYYA+ K GVHHY IELG
Sbjct: 48 NTPALRKSEIEYYAML-AKTGVHHYSGNN-IELG 79
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 49.6 bits (113), Expect = 1e-05
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLP 277
GTACGKY+RV L+I DPGDSDII ++P
Sbjct: 82 GTACGKYFRVSCLSIVDPGDSDIIKSIP 109
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1
Query: 94 NAPPLRKSEIEYYALP*PKQGVHHYEWKTIIELG 195
N PPLR+SEIEYYA+ K GVHHY ++LG
Sbjct: 51 NCPPLRRSEIEYYAML-AKVGVHHYNGNN-VDLG 82
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 47.2 bits (107), Expect = 8e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLP 277
GTACGKY++V L+I DPGDSDII +P
Sbjct: 19 GTACGKYFQVSCLSIVDPGDSDIIKQMP 46
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 43.2 bits (97), Expect = 0.001
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 185 LSSGTACGKYYRVCTLAITDPGDSDI 262
L GTACG+++R C L+ITD GDSDI
Sbjct: 77 LDLGTACGRHFRACVLSITDVGDSDI 102
Score = 33.9 bits (74), Expect = 0.77
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 94 NAPPLRKSEIEYYALP*PKQGVHHYEWKTIIELG 195
N PP+RK+EIEYY K +HHY ++LG
Sbjct: 49 NCPPIRKAEIEYYCTL-SKTPIHHYSGNN-LDLG 80
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 37.1 bits (82), Expect = 0.083
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 140 LSQNRVSTTTSGKQ*LSSGTACGKYYRVCTLAITDPGDSDIITTL 274
LS+ +V G L GTA GK +RV ++I + GDSDI+TTL
Sbjct: 62 LSKTKVYYFQGGNNEL--GTAVGKLFRVGVVSILEAGDSDILTTL 104
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIIT 268
G ACGK + V TLAI PG+SDI++
Sbjct: 68 GKACGKPFMVSTLAIVSPGESDILS 92
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLPE 280
G ACGK + V LA+ +PGDS+I+ L E
Sbjct: 68 GAACGKPFPVAALAVIEPGDSEIMALLRE 96
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 35.9 bits (79), Expect = 0.19
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLPE 280
GTACGKY+R ++I D G+S+I+ + +
Sbjct: 81 GTACGKYFRSSVISIIDAGESEILKMIKQ 109
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 34.3 bits (75), Expect = 0.58
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 155 VSTTTSGKQ*LSSGTACGKYYRVCTLAITDPGDSDIIT 268
V T T + G ACGK + V LAI + GDSDI+T
Sbjct: 55 VKTYTYEGSGVQLGRACGKPFIVSALAIEESGDSDILT 92
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLPE 280
GT CGK + + T++I D GDS I+ + E
Sbjct: 79 GTLCGKPFMISTISIIDEGDSKILDIIKE 107
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDII 265
G ACGK + + T+ + D GDSD++
Sbjct: 69 GVACGKPFSISTICVLDAGDSDLL 92
>UniRef50_Q8XU16 Cluster: Putative phospholipase
d/transphosphatidylase; protein; n=1; Ralstonia
solanacearum|Rep: Putative phospholipase
d/transphosphatidylase; protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 575
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 196 TRAQLLFSTRSGGHPVLAKGEHNILSPTSSEEAHSLAMITNLATLPEATA 47
T ++++ G HPV+ G HN+ + S + +L +I N L +A A
Sbjct: 470 THSKVIVIDPFGDHPVVVTGSHNLSASASGKNDENLLIIENCPELAKAYA 519
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 31.9 bits (69), Expect = 3.1
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDIITTLPEA 283
G CG+ + V ++A+ D G+SD+I T+ +A
Sbjct: 72 GDVCGRPHVVASMAVLDDGESDLIATVRKA 101
>UniRef50_UPI0001555ED1 Cluster: PREDICTED: similar to vomeronasal
receptor V1RF3, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to vomeronasal receptor
V1RF3, partial - Ornithorhynchus anatinus
Length = 187
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = -3
Query: 288 AVASGNVVMMSESPGSVIARVHTL*YFPQAVPELNYCFPLVVVDTLFWL---RESIIFYL 118
+VASG +V + + ++H Y P+ +PE+ ++++ TL++L R+SI+F +
Sbjct: 76 SVASGYMVTVLHRHHQQVRQLHGAGYSPRQMPEVRAAKRVIILVTLYFLLYGRQSIMFSI 135
Query: 117 RL 112
L
Sbjct: 136 IL 137
>UniRef50_A6W4S9 Cluster: Glycosyl transferase family 2; n=1;
Kineococcus radiotolerans SRS30216|Rep: Glycosyl
transferase family 2 - Kineococcus radiotolerans
SRS30216
Length = 270
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 169 RSGGHPVLAKGEHNILSPTSSEEAHSLAMITNLATLPEA 53
RSGG P +A G+ SP+ S A +L + L T EA
Sbjct: 3 RSGGRPGVASGDRRPRSPSESTLAEALRCVVVLPTYDEA 41
>UniRef50_Q4H1D4 Cluster: RlsA; n=2; Volvox carteri|Rep: RlsA -
Volvox carteri f. nagariensis
Length = 967
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 54 ASGNVAKLVIIARECASSEEVGDRILCSPLAKTGCPPLRVENNN 185
A+ A ++A C S GD + PLA GCPP ++N+N
Sbjct: 391 AAVETATTAVVAPACGSGGAAGDAAI--PLASGGCPP--IDNSN 430
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDII 265
G CGK Y V + + +PGDSDI+
Sbjct: 69 GPICGKPYVVSAVTVLEPGDSDIM 92
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDII 265
G+ CGK + V L I DPGDS I+
Sbjct: 71 GSVCGKPFTVGALLIQDPGDSTIL 94
>UniRef50_Q122Z2 Cluster: Pyruvate carboxyltransferase; n=64;
Proteobacteria|Rep: Pyruvate carboxyltransferase -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 729
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 181 LFSTRSGGHPVLAKGEHNILSPTSSEEAHSLAMI 80
L R G LA G H + P S+ AHSLA +
Sbjct: 83 LVPNRRGAEAALAAGVHKLTMPVSASAAHSLANV 116
>UniRef50_A7QKF7 Cluster: Chromosome chr2 scaffold_112, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_112, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 737
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 148 KQGVHHYEWKTIIELGYCLRKILQSMYSSNHRP 246
+QG H + G C R+++Q MY HRP
Sbjct: 213 QQGTHEVSAMRPSDSGICSRRLMQYMYHQRHRP 245
>UniRef50_Q56953 Cluster: Chelated iron transport system membrane
protein yfeB; n=97; Bacteria|Rep: Chelated iron
transport system membrane protein yfeB - Yersinia pestis
Length = 296
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 267 VMMSESPGSVIARVHTL*YFPQAVPELNYCFPLVVVDTLFWLRESIIFYLRLPQR 103
V +S P S + +T+ Y PQ ++++ FP++V D + R + +LR+P R
Sbjct: 68 VELSHKPISHALKQNTIAYVPQT-EDVDWNFPVLVEDVVMMGRYGKMNFLRIPSR 121
>UniRef50_Q9ZIW5 Cluster: LipR activator; n=2; Streptomyces|Rep:
LipR activator - Streptomyces coelicolor
Length = 941
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 48 AVASGNVAKLVIIARECASSEEVGDRILCSPLAKTG 155
A A GN A LV + R + +E G R L SPLA+ G
Sbjct: 179 AEAEGNPALLVALVRRLSPAELRGHRPLPSPLAEAG 214
>UniRef50_A3I5C3 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 552
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 213 YFPQAVPELNYCFPLVVVDTLFWLRESIIFYLRLPQRRR 97
Y+P+ + ELN P VV+D F L E + + +L QR +
Sbjct: 364 YYPKDLQELNTLAPTVVLDKKFRLFERLRYIAKLFQRSK 402
>UniRef50_Q4PMJ7 Cluster: Putative secreted salivary protein of the
histamine binding family; n=1; Ixodes scapularis|Rep:
Putative secreted salivary protein of the histamine
binding family - Ixodes scapularis (Black-legged tick)
(Deer tick)
Length = 188
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 201 AVPELNYCFPLVVVDTLFWLRESIIFY 121
AVPE +C L+V+ F LR +I++Y
Sbjct: 56 AVPEAAHCVSLLVMSNAFGLRSAILYY 82
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 194 GTACGKYYRVCTLAITDPGDSDII 265
G CGK + + +AI D G+SDI+
Sbjct: 76 GPVCGKPFTIAAMAILDAGESDIL 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,606,006
Number of Sequences: 1657284
Number of extensions: 4782340
Number of successful extensions: 11471
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 11143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11470
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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