Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D10
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   2.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.8  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    20   6.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 217 QSMYSSNHRPWRF*HHN 267
           Q++Y  NHRPW+  H N
Sbjct: 529 QTVY--NHRPWQQLHLN 543


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 166 YEWKTIIELGYCLRKILQSMYS 231
           + W  I+ L  C+   L S+Y+
Sbjct: 224 FGWTLILILAKCITSSLSSLYT 245


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 160 GHPVLAKGEHNILSPTSS 107
           GH ++A   H   S TSS
Sbjct: 69  GHTIIASNHHLAKSDTSS 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,515
Number of Sequences: 336
Number of extensions: 1234
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)