Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D10
(350 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 0.79
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 0.79
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 4.2
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 5.6
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 5.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 5.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 7.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 7.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 7.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.8
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 20 9.8
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 20 9.8
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 0.79
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 187 QLLFSTRSGGHPVLAKGEHNILSPTSSEEAHSLAMITNLAT 65
Q+ ST +G + G H++L S A S + +TN+ T
Sbjct: 922 QIQVSTSAGLQTIRLSG-HSVLHSAQSVVASSASNVTNVTT 961
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 0.79
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 202 SSTRAQLLFSTRSGGHPVLAKGEHNILSPT---SSEEAHSL 89
S +Q++ S SG H + + +ILSPT S + HSL
Sbjct: 57 SQNPSQMMISPASGIHQMQQLLQQHILSPTQLQSFMQQHSL 97
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.0 bits (42), Expect = 4.2
Identities = 5/17 (29%), Positives = 11/17 (64%)
Frame = +1
Query: 169 EWKTIIELGYCLRKILQ 219
+W ++ GYC+ +L+
Sbjct: 308 DWFLLMSFGYCIATLLE 324
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 20.6 bits (41), Expect = 5.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 136 EHNILSPTSSEEAHS 92
+HN SPT S HS
Sbjct: 58 QHNSPSPTGSSPQHS 72
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 20.6 bits (41), Expect = 5.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 157 VHHYEWKTIIELGYCLRKILQSMYSSNHRPWRF 255
+H + + LGYC I +Y+ + +RF
Sbjct: 39 IHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 71
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 5.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 157 VHHYEWKTIIELGYCLRKILQSMYSSNHRPWRF 255
+H + + LGYC I +Y+ + +RF
Sbjct: 487 IHPTVFSVLFWLGYCNSAINPCIYALFSKDFRF 519
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 7.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 126 ILCSPLAKTGCPP 164
IL SPL + G PP
Sbjct: 388 ILASPLKREGGPP 400
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 129 IFYLRLPQRRRIPWR 85
+FYL + R +PWR
Sbjct: 123 LFYLLVSLRIDLPWR 137
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 129 IFYLRLPQRRRIPWR 85
+FYL + R +PWR
Sbjct: 176 LFYLLVSLRIDLPWR 190
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 119 SDFLRGGAFPGDDHQLSN 66
+DF G +PGD LSN
Sbjct: 85 ADFCCGMRWPGDATGLSN 102
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 19.8 bits (39), Expect = 9.8
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +2
Query: 206 GKYYRVCT 229
GK++RVCT
Sbjct: 190 GKFHRVCT 197
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 19.8 bits (39), Expect = 9.8
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -3
Query: 129 IFYLRLPQRRRIPW 88
IFY + R +PW
Sbjct: 85 IFYFFMSMRSELPW 98
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,647
Number of Sequences: 438
Number of extensions: 1398
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8060325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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