Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D09
         (501 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    24   3.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   4.4  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   7.7  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -3

Query: 151 LTTAMAG*PNPPSSKASSRVGCAAASAHIHPHIL 50
           LTTA +G   P  S   S  G    +  IH H L
Sbjct: 15  LTTAASGQQTPEQSACVSHAGAILTAPLIHCHPL 48


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 158  ETQVLHPQGILLRDWHQ*IPQR 223
            ETQ+LHP G     +H+  P R
Sbjct: 1201 ETQLLHPPGTAPNSFHKSSPGR 1222


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -3

Query: 205 MPVSEKDPLRVENLSFFALTTAM----AG*PNPPSSKASSRVGCAAASAHIHP 59
           +PV    P+R   L  +AL+T +    AG P PP  +  +    A ++  + P
Sbjct: 739 LPVETSSPVREPALPTYALSTIVAAETAGVPVPPMGEDEAHCEPAESAKRLLP 791


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 253 GAVWPRPNERPLRNSLMPVSEKDPLRVENLSFFALTTAMAG 131
           G+++P    R  +NS + V EKD  R+  LSF    T   G
Sbjct: 178 GSIFP---PRITKNSTLHVYEKDLCRLLPLSFEKEVTVRGG 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,920
Number of Sequences: 2352
Number of extensions: 6668
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)