Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D09
         (501 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40411-4|AAC47065.1|  440|Caenorhabditis elegans Temporarily ass...   171   2e-43
Z98866-5|CAB11548.1|  436|Caenorhabditis elegans Hypothetical pr...   118   2e-27
AL021474-5|CAA16307.2|  673|Caenorhabditis elegans Hypothetical ...    28   4.4  
Z81056-2|CAB02901.2|  323|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AC024809-2|AAP40516.1|   73|Caenorhabditis elegans Hypothetical ...    27   7.6  
AC024809-1|AAF59542.4|  519|Caenorhabditis elegans Hypothetical ...    27   7.6  

>U40411-4|AAC47065.1|  440|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 320 protein.
          Length = 440

 Score =  171 bits (416), Expect = 2e-43
 Identities = 71/124 (57%), Positives = 96/124 (77%)
 Frame = +3

Query: 3   NDYISILKRLGDKYKSKMWGWIWAEAAAQPTLEEALELGGFGYPAMAVVNAKKLKFSTLR 182
           N+Y+++LK   +K+K  +WGWIW E AAQP LEE+ E+GGFGYPAM  +N +K K++ L+
Sbjct: 317 NNYLAMLKEQSEKFKKNLWGWIWVEGAAQPALEESFEVGGFGYPAMTALNFRKNKYAVLK 376

Query: 183 GSFSETGINEFLRGLSFGRGQTAPVKGAEMPKITTTEPWDGNDGELPLEEDIDLSDVDLE 362
           GSF + GI+EFLR LS+G+G+T+ ++G   PKI  TE WDG DG LP E+DIDLSD+DL+
Sbjct: 377 GSFGKDGIHEFLRDLSYGKGRTSSLRGDGFPKIQKTEKWDGKDGALPAEDDIDLSDIDLD 436

Query: 363 KDEL 374
           K EL
Sbjct: 437 KTEL 440


>Z98866-5|CAB11548.1|  436|Caenorhabditis elegans Hypothetical
           protein Y49E10.4 protein.
          Length = 436

 Score =  118 bits (284), Expect = 2e-27
 Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 5/126 (3%)
 Frame = +3

Query: 12  ISILKRLGDKYKSKMWGWIWAEAAAQPTLEEALELGGFGYPAMAVVNAKKLKFSTLRGSF 191
           I +L  L   +K + +GW+W E  AQ  ++ A E+G +G+P +  ++ KK+ +ST  G F
Sbjct: 311 IDMLNELATIFKKRSFGWVWMEGGAQENVQRAFEIGDYGFPVLIAMSPKKMMYSTQIGQF 370

Query: 192 SETGINEFLRGLSFGRGQTAPVKGAEMP----KITTTEPWDGNDGELPLEEDIDLSDVDL 359
           S  GI EFL  +++G+G+   +K   +     KI  T+PWDG D ELP+ EDIDLSDVD+
Sbjct: 371 SVDGIKEFLNAVNYGKGRVLEIKPTHLSNNFLKIVETQPWDGKDKELPVMEDIDLSDVDM 430

Query: 360 -EKDEL 374
            EK EL
Sbjct: 431 DEKTEL 436


>AL021474-5|CAA16307.2|  673|Caenorhabditis elegans Hypothetical
           protein Y32F6A.2 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 42  YKSK-MWGWIWAEAAAQPTLEEALELGGFGYPAMAVVN 152
           Y+ K MW W WA+AAA      AL +G  G    A +N
Sbjct: 338 YEDKWMWVWSWADAAAHAL--RALNVGCGGIQKFASLN 373


>Z81056-2|CAB02901.2|  323|Caenorhabditis elegans Hypothetical
           protein F09F3.2 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 69  ISIPTSCSCIYHPDVSIW 16
           +S+   CSCI+ P++ IW
Sbjct: 154 LSLIAGCSCIFDPNIFIW 171


>AC024809-2|AAP40516.1|   73|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.7b protein.
          Length = 73

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 12  ISILKRLGDKYKSKMWGWIWAEAAAQPTLEEALE--LGGFGYPAMAV 146
           I+ L+ +G  Y   MWGW  A+A     + +A+   +G   Y   AV
Sbjct: 23  ITNLETIGSLYAKMMWGWTNAQAVEYTGILQAVNGLVGVLVYALFAV 69


>AC024809-1|AAF59542.4|  519|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.7a protein.
          Length = 519

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +3

Query: 12  ISILKRLGDKYKSKMWGWIWAEAAAQPTLEEALE--LGGFGYPAMAV 146
           I+ L+ +G  Y   MWGW  A+A     + +A+   +G   Y   AV
Sbjct: 283 ITNLETIGSLYAKMMWGWTNAQAVEYTGILQAVNGLVGVLVYALFAV 329


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,647,700
Number of Sequences: 27780
Number of extensions: 143083
Number of successful extensions: 565
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)