Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D06
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF304120-1|AAG50233.1| 213|Caenorhabditis elegans 4D656 protein. 69 1e-12
AC024817-36|AAF59580.1| 213|Caenorhabditis elegans Hypothetical... 69 1e-12
AC006624-6|AAN84836.1| 355|Caenorhabditis elegans Hypothetical ... 27 3.0
AC006624-5|AAK68265.1| 418|Caenorhabditis elegans Hypothetical ... 27 3.0
AC006624-4|AAK68264.1| 420|Caenorhabditis elegans Hypothetical ... 27 3.0
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 26 7.0
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 26 7.0
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 26 7.0
U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical pr... 26 7.0
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 26 7.0
AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical... 26 7.0
AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical... 26 7.0
AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical ... 26 7.0
AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein. 26 7.0
AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein. 26 7.0
AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein. 26 7.0
U58752-7|AAB00669.1| 343|Caenorhabditis elegans Hypothetical pr... 26 9.3
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 26 9.3
>AF304120-1|AAG50233.1| 213|Caenorhabditis elegans 4D656 protein.
Length = 213
Score = 68.5 bits (160), Expect = 1e-12
Identities = 34/93 (36%), Positives = 48/93 (51%)
Frame = +2
Query: 83 MSLQWTIVASFLYAEIAVVLLLTLPIASPSRWQKFFKSKFLAYISGQASIYFXXXXXXXX 262
M+LQWTIVA LYAEIA+ L LP P+ W K FKS+ ++ A IY
Sbjct: 1 MTLQWTIVAGVLYAEIAITFTLLLPWIRPTLWSKLFKSRLFTALAKHAHIYSITFGFVLF 60
Query: 263 XXXXDAIREMPKYSNVETSEHQHLDAEMQGNMR 361
D +RE KY+ +E + +++ +MR
Sbjct: 61 ILFADGVRETMKYNGLEGQMGRTAESDATHHMR 93
>AC024817-36|AAF59580.1| 213|Caenorhabditis elegans Hypothetical
protein Y54G2A.18 protein.
Length = 213
Score = 68.5 bits (160), Expect = 1e-12
Identities = 34/93 (36%), Positives = 48/93 (51%)
Frame = +2
Query: 83 MSLQWTIVASFLYAEIAVVLLLTLPIASPSRWQKFFKSKFLAYISGQASIYFXXXXXXXX 262
M+LQWTIVA LYAEIA+ L LP P+ W K FKS+ ++ A IY
Sbjct: 1 MTLQWTIVAGVLYAEIAITFTLLLPWIRPTLWSKLFKSRLFTALAKHAHIYSITFGFVLF 60
Query: 263 XXXXDAIREMPKYSNVETSEHQHLDAEMQGNMR 361
D +RE KY+ +E + +++ +MR
Sbjct: 61 ILFADGVRETMKYNGLEGQMGRTAESDATHHMR 93
>AC006624-6|AAN84836.1| 355|Caenorhabditis elegans Hypothetical
protein C53D5.1c protein.
Length = 355
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 217 RASFDLLPYFDRRTDTMFARRYSRNAK-IFQCRNIGASASRRRN 345
R++ +L + D+ + +FA ++S+N K + CR+ G + + R N
Sbjct: 299 RSNGNLEVFCDKLVNKLFANQWSKNNKYLVACRDTGRNITTRLN 342
>AC006624-5|AAK68265.1| 418|Caenorhabditis elegans Hypothetical
protein C53D5.1b protein.
Length = 418
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 217 RASFDLLPYFDRRTDTMFARRYSRNAK-IFQCRNIGASASRRRN 345
R++ +L + D+ + +FA ++S+N K + CR+ G + + R N
Sbjct: 362 RSNGNLEVFCDKLVNKLFANQWSKNNKYLVACRDTGRNITTRLN 405
>AC006624-4|AAK68264.1| 420|Caenorhabditis elegans Hypothetical
protein C53D5.1a protein.
Length = 420
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 217 RASFDLLPYFDRRTDTMFARRYSRNAK-IFQCRNIGASASRRRN 345
R++ +L + D+ + +FA ++S+N K + CR+ G + + R N
Sbjct: 364 RSNGNLEVFCDKLVNKLFANQWSKNNKYLVACRDTGRNITTRLN 407
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +1
Query: 37 VVASYFALK-----WIILCKNESPVDNRSIVSLR-RNSCRSAIDFANSEPK*MAEIFQVQ 198
V+A YF L W + + E+ ++R +V L R ++ P E+ VQ
Sbjct: 1225 VLARYFDLVKTYNYWTVSSRPENNENDRVVVQLTVEPMSRQYVNITMQSPMERIELKNVQ 1284
Query: 199 IPRLY 213
+PR+Y
Sbjct: 1285 VPRVY 1289
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +1
Query: 37 VVASYFALK-----WIILCKNESPVDNRSIVSLR-RNSCRSAIDFANSEPK*MAEIFQVQ 198
V+A YF L W + + E+ ++R +V L R ++ P E+ VQ
Sbjct: 1225 VLARYFDLVKTYNYWTVSSRPENNENDRVVVQLTVEPMSRQYVNITMQSPMERIELKNVQ 1284
Query: 199 IPRLY 213
+PR+Y
Sbjct: 1285 VPRVY 1289
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = +1
Query: 37 VVASYFALK-----WIILCKNESPVDNRSIVSLR-RNSCRSAIDFANSEPK*MAEIFQVQ 198
V+A YF L W + + E+ ++R +V L R ++ P E+ VQ
Sbjct: 1225 VLARYFDLVKTYNYWTVSSRPENNENDRVVVQLTVEPMSRQYVNITMQSPMERIELKNVQ 1284
Query: 199 IPRLY 213
+PR+Y
Sbjct: 1285 VPRVY 1289
>U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical
protein F38B6.8 protein.
Length = 406
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 96 HWRLIFAQYYPLQCKITRDNNLNTVSMYN 10
H+ +F PL C+ N NTVS YN
Sbjct: 248 HYHYVFPLNMPLYCRELTVFNHNTVSEYN 276
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 105 TIVHWRLIFAQYYPLQCKITRDNNLNT 25
T+ W+L F+ Y+P +++R N ++T
Sbjct: 718 TLCGWKLYFSIYHPKHVELSRRNFIDT 744
>AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical
protein Y39E4B.12c protein.
Length = 624
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 259 QYADQNKEVNRSLPANISEEFGLEKF 182
QYA V+R+LP NI E EK+
Sbjct: 145 QYASDMISVHRTLPTNIDAECKTEKY 170
>AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical
protein Y39E4B.12b protein.
Length = 623
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 259 QYADQNKEVNRSLPANISEEFGLEKF 182
QYA V+R+LP NI E EK+
Sbjct: 145 QYASDMISVHRTLPTNIDAECKTEKY 170
>AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical
protein Y39E4B.12a protein.
Length = 626
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 259 QYADQNKEVNRSLPANISEEFGLEKF 182
QYA V+R+LP NI E EK+
Sbjct: 145 QYASDMISVHRTLPTNIDAECKTEKY 170
>AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein.
Length = 624
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 259 QYADQNKEVNRSLPANISEEFGLEKF 182
QYA V+R+LP NI E EK+
Sbjct: 145 QYASDMISVHRTLPTNIDAECKTEKY 170
>AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein.
Length = 626
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 259 QYADQNKEVNRSLPANISEEFGLEKF 182
QYA V+R+LP NI E EK+
Sbjct: 145 QYASDMISVHRTLPTNIDAECKTEKY 170
>AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein.
Length = 623
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 259 QYADQNKEVNRSLPANISEEFGLEKF 182
QYA V+R+LP NI E EK+
Sbjct: 145 QYASDMISVHRTLPTNIDAECKTEKY 170
>U58752-7|AAB00669.1| 343|Caenorhabditis elegans Hypothetical
protein B0218.7 protein.
Length = 343
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 61 KWIILCKNESPVDNRSIVSLRRNSCRSAIDFANSEPK*MAEIFQ 192
+W I + +P+DN +I++L + A++ A+ P AE Q
Sbjct: 79 QWFIFVPSSAPLDNTTIITLSHD----AVNLASIPPTDSAESLQ 118
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 156 GKVNSRTTAISA*RNDATIVHWRLIFAQYYPLQCKIT 46
G+ + SA N T++ WR I + YY K+T
Sbjct: 1859 GREGQQELGNSADWNIETVIDWRKIVSMYYQANGKLT 1895
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,225,480
Number of Sequences: 27780
Number of extensions: 153089
Number of successful extensions: 410
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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