Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D06
(363 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17780.1 68416.m02268 expressed protein 32 0.13
At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) simi... 31 0.17
At4g28670.1 68417.m04097 protein kinase family protein contains ... 29 0.70
At1g48440.1 68414.m05415 expressed protein 29 0.70
At3g14010.1 68416.m01769 hydroxyproline-rich glycoprotein family... 28 1.6
At2g02640.1 68415.m00203 DC1 domain-containing protein contain... 27 2.8
At2g02610.1 68415.m00200 DC1 domain-containing protein contain... 27 2.8
At5g17190.1 68418.m02014 expressed protein similar to unknown pr... 27 4.9
At1g46840.1 68414.m05218 F-box family protein contains F-box dom... 27 4.9
At3g03160.1 68416.m00312 expressed protein 26 6.5
At2g18890.1 68415.m02204 protein kinase family protein contains ... 26 6.5
At2g15520.1 68415.m01776 zinc finger protein, putative strong si... 26 6.5
At3g24680.1 68416.m03099 zinc finger protein, putative identical... 26 8.6
>At3g17780.1 68416.m02268 expressed protein
Length = 129
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2
Query: 83 MSLQWTIVASFLYAEIAVVLLLTLP 157
M+LQW I++ + AE+A+ ++LTLP
Sbjct: 1 MALQWLILSYVVAAEVAIAVILTLP 25
>At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 415
Score = 31.5 bits (68), Expect = 0.17
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 128 IAVVLLLTLPIASPSRWQKFFKSKFLAY 211
++V+L LT+P SPS W +F++S + +
Sbjct: 170 VSVLLNLTIPKPSPSEWSRFYRSANIVF 197
>At4g28670.1 68417.m04097 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 625
Score = 29.5 bits (63), Expect = 0.70
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +2
Query: 104 VASFLYAEIAVVLLLTLPIASPSRWQKFFKSKFLAYISGQASIYFXXXXXXXXXXXXDAI 283
+AS L + +AVVL LT + +PS K + L YI ++ DAI
Sbjct: 1 MASTLISSLAVVLPLT--LLAPSMSMKISRIDVLGYICNNGTVSNEEAYRRSYQINLDAI 58
Query: 284 REMPKYSNVETSEH 325
R ++ T EH
Sbjct: 59 RGDMRHVKFGTHEH 72
>At1g48440.1 68414.m05415 expressed protein
Length = 129
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 83 MSLQWTIVASFLYAEIAVVLLLTLP 157
M+LQW I++ + E+ + L+LTLP
Sbjct: 1 MALQWLILSYVVAVEVVITLVLTLP 25
>At3g14010.1 68416.m01769 hydroxyproline-rich glycoprotein family
protein similar to Mrs16p (GI:2737884) [Saccharomyces
cerevisiae]; weak similarity to ataxin-2 related protein
(GI:1679686) [Homo sapiens]
Length = 595
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 256 YADQNKEVNRSLP-ANISEEFGLEKFLPSTWARYWQSQ*QNDSYFGVK 116
+ D+ +++ R +P I LE + W R W N S FGVK
Sbjct: 162 HVDRERQLQRWVPDETIPHGADLENVFDNPWNRKWNQFEVNKSLFGVK 209
>At2g02640.1 68415.m00203 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 115 KRCYDCPLETHFCTILSTSMQ-NNSRQQFKYCI 20
K C +CPLE + T S+Q S+ +F +CI
Sbjct: 143 KECVECPLEISYPTHTKHSLQLFYSKYRFDHCI 175
>At2g02610.1 68415.m00200 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 115 KRCYDCPLETHFCTILSTSMQ-NNSRQQFKYCI 20
K C +CPLE + T S+Q S+ +F +CI
Sbjct: 143 KECVECPLEISYPTHTKHSLQLFYSKYRFDHCI 175
>At5g17190.1 68418.m02014 expressed protein similar to unknown
protein (gb|AAF26109.1)
Length = 130
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 83 MSLQWTIVASFLYAEIAVVLLLTLP 157
M+L+W ++ AE +V+LLT+P
Sbjct: 1 MALEWVVLGYAAAAEAIMVILLTMP 25
>At1g46840.1 68414.m05218 F-box family protein contains F-box domain
Pfam:PF00646; contains 1 predicted transmembrane domain;
similar to Probable disease resistance RPP8-like protein
2 (Swiss-Prot:Q9MAG6) [Arabidopsis thaliana]
Length = 475
Score = 26.6 bits (56), Expect = 4.9
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 8 KLYIDTVFKLLSRVILH*SG*YCAKMSLQWTIVASFLYAEIAVVLLLTLPIASPSRWQKF 187
KL+ID V ++LSR+ S C +S QW S L ++ V L ++ P W F
Sbjct: 30 KLHIDLVIEILSRLSAK-SIAICRCVSKQWN---SLLVSQDFVESFLRSSLSRPRIWFTF 85
Query: 188 -FKSKFLAYISGQ 223
F K+ + S Q
Sbjct: 86 RFDGKWNFFSSPQ 98
>At3g03160.1 68416.m00312 expressed protein
Length = 130
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 83 MSLQWTIVASFLYAEIAVVLLLTLP 157
M+L+W ++ AE +V+LLT+P
Sbjct: 1 MALEWVVLGYAAAAEAIMVVLLTMP 25
>At2g18890.1 68415.m02204 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 392
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 244 NKEVNRSLPANISEEFGLEKFLPSTWARY 158
N +N+ IS+ FGL K+LPS W+ +
Sbjct: 200 NVLLNQDFEPQISD-FGLAKWLPSQWSHH 227
>At2g15520.1 68415.m01776 zinc finger protein, putative strong
similarity to zinc finger protein [Arabidopsis thaliana]
GI:976277
Length = 483
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -3
Query: 139 NDSYFGVKKRCYDCPLETH---FCTILSTSMQN 50
N Y ++KRCY+C TH C IL + Q+
Sbjct: 191 NFHYERIQKRCYECQRLTHEKDVCPILVKARQD 223
>At3g24680.1 68416.m03099 zinc finger protein, putative identical to
zinc-finger protein GI:976277 from [Arabidopsis
thaliana]
Length = 487
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -3
Query: 130 YFGVKKRCYDCPLETH---FCTILSTSMQNNS 44
Y ++KRCY+C TH C IL Q+ +
Sbjct: 198 YERIQKRCYECQRLTHEKDLCPILIKERQDKA 229
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,514,408
Number of Sequences: 28952
Number of extensions: 134805
Number of successful extensions: 372
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 467982008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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