Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D05
(285 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC11B10.04c |mrps28||mitochondrial ribosomal protein subunit S... 26 1.2
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 26 1.2
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 25 1.6
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 25 2.1
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 25 2.8
SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|... 25 2.8
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 2.8
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 24 3.7
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 24 3.7
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 24 3.7
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 24 4.9
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 24 4.9
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 24 4.9
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 23 6.5
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 23 6.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 23 8.5
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 23 8.5
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 23 8.5
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 23 8.5
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 23 8.5
>SPBC11B10.04c |mrps28||mitochondrial ribosomal protein subunit
S28|Schizosaccharomyces pombe|chr 2|||Manual
Length = 288
Score = 25.8 bits (54), Expect = 1.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 181 DKIGASATAAHTDFINRNDYSLDGKLNLFKSSDTS 285
+KI ASAT DFI N+ +N F SSDTS
Sbjct: 119 EKIRASATEETKDFIKLNE------VNEFPSSDTS 147
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 25.8 bits (54), Expect = 1.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 175 FKDKIGASATAAHTDFINRNDYSLDGKLNLFKSSD 279
F+D+ S AH N ND+++ G K+SD
Sbjct: 370 FEDRTHLSDHGAHFHLGNANDFNMQGSSRKRKASD 404
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 25.4 bits (53), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 149 VLKLGTLAISGIFLVAKAFAVMSWLSLWKRFTLPAAVTLS 30
++ G+L+I IF+ F + SW++L+ T A TLS
Sbjct: 401 IIVFGSLSI--IFIHIYCFKITSWVNLYGWITCTIARTLS 438
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 25.0 bits (52), Expect = 2.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 148 TVGGGIDYMFKD-KIGASATAAHTDFIN 228
+VG I Y +D K+ TA+H DF+N
Sbjct: 25 SVGRAIRYCKEDGKVEGCETASHVDFLN 52
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.6 bits (51), Expect = 2.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 211 HTDFINRNDYSLDGKLNLFKSSDT 282
HT +N D+S DG+ L S DT
Sbjct: 44 HTGCVNTLDWSADGEFLLSGSDDT 67
>SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 467
Score = 24.6 bits (51), Expect = 2.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 81 VVIVVEEIHFAGSCHLVSEPG 19
+V + +IHF+G+C+ V+ G
Sbjct: 397 IVSIPHQIHFSGTCYSVAAGG 417
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 24.6 bits (51), Expect = 2.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 67 HNDNHDITAKAFATRNMPDIANVPNFNT 150
H D+ DITA + +T P+ +V F++
Sbjct: 113 HPDSEDITAVSLSTPPFPESIDVARFSS 140
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +1
Query: 94 KAFATRNMPDIA--NVPNFNTVGGG 162
++FA P++ N PN TVGGG
Sbjct: 247 QSFAVLYSPELTSLNFPNLTTVGGG 271
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 24.2 bits (50), Expect = 3.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 105 GESLRCDVVVIVVEEIHF 52
G+S RCD ++ EE+HF
Sbjct: 174 GQSGRCDGYILEGEELHF 191
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 24.2 bits (50), Expect = 3.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 105 GESLRCDVVVIVVEEIHF 52
G+S RCD ++ EE+HF
Sbjct: 174 GQSGRCDGYILEGEELHF 191
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 23.8 bits (49), Expect = 4.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 260 FSFPSRE*SLRLMKSV*AAVADAPILSLNI 171
FSF SRE S R +K + +A+ P L ++I
Sbjct: 601 FSFASRENSNRALKILKSAILYRPHLRMSI 630
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 23.8 bits (49), Expect = 4.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 85 CRGYRCGRDSLCRQLSPCL 29
C+ Y+C R C Q + C+
Sbjct: 102 CQEYKCDRSHHCSQCNKCI 120
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 23.8 bits (49), Expect = 4.9
Identities = 14/69 (20%), Positives = 32/69 (46%)
Frame = -1
Query: 276 RTLEEVQLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGES 97
R+ ++ G+ ID ++ S R + ++ ++VY S+ + +W I +
Sbjct: 657 RSAADIVFLAPGLSAIIDALKTS--RQIFHRMYSYVVYRIALSLHLEIFLGLWLIIRNQL 714
Query: 96 LRCDVVVIV 70
L ++VV +
Sbjct: 715 LNLELVVFI 723
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 208 AHTDFINRNDYSLDGKLNLFKSSDTS 285
+H +F + ND+S KLN + S+TS
Sbjct: 158 SHDNFSDSNDFSFQKKLNT-EDSNTS 182
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 64 FHNDNHDITAKAFATRNMPDIANVPNFNTVGGGIDY 171
++NDN I + N+P+ +V N N I++
Sbjct: 54 YNNDNSKIDNFSNEQMNIPEFISVRNLNDDSSSIEF 89
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 125 SLMYPTSTLSVAE*TICSKI 184
S++YPTST S TI S +
Sbjct: 711 SILYPTSTASSVANTIASDV 730
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = -1
Query: 189 NLIFEHIVYSATDSVEVGYISDIWHISGGE 100
NL+ +HI + + D+WH + E
Sbjct: 93 NLVIDHIASRDLQKRVLNILIDLWHFNPSE 122
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 195 CTNLIFEHIVYSATDSVEVGYISDIWHIS 109
C NL FEH ++ SDI++IS
Sbjct: 257 CANLEFEHNSRKLEKLQKMNVFSDIFYIS 285
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 23.0 bits (47), Expect = 8.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 22 GFGDKVTAAGKVNL 63
GFGDK + AGK N+
Sbjct: 266 GFGDKSSTAGKHNV 279
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 208 AHTDFINRNDYSLDGKLNLFKSSD 279
AHTD + R Y+ DGK L S+
Sbjct: 11 AHTDGLTRLAYTRDGKFLLTVGSN 34
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,266,122
Number of Sequences: 5004
Number of extensions: 24351
Number of successful extensions: 68
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 65671360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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