Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D05
(285 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 29 0.76
12_02_0412 - 18799217-18801061 28 1.0
02_04_0519 + 23619084-23619198,23619468-23619559,23619655-236197... 28 1.0
12_02_0591 + 20864861-20867329 27 2.3
04_04_1581 - 34581455-34581466,34581525-34581616,34582584-345826... 26 4.1
04_04_0741 + 27703869-27704186,27704278-27704337 26 4.1
02_05_0422 - 28831195-28831254,28831345-28831833,28831924-288320... 26 4.1
08_01_0320 + 2853325-2853463,2853635-2853951 26 5.4
03_02_0165 + 6083059-6084252,6084664-6084741 26 5.4
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 26 5.4
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 25 7.1
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170... 25 7.1
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 25 7.1
06_01_0077 + 626126-626137,626222-627421 25 7.1
10_08_0434 + 17896432-17896551,17896709-17896786,17898528-17898836 25 9.4
10_08_0357 - 17158414-17160150,17160534-17160710 25 9.4
08_02_0077 - 11979497-11979654,11980012-11982178 25 9.4
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 25 9.4
01_06_1545 + 38144624-38145301 25 9.4
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 28.7 bits (61), Expect = 0.76
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 103 ATRNMPDIANVPNFNTVGGGIDYMFKDKIG 192
A N P +A N N G ++Y+F DK G
Sbjct: 385 AESNTPALARTSNLNEELGQVEYIFSDKTG 414
>12_02_0412 - 18799217-18801061
Length = 614
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 168 VYSATDSVEVGYISDIWHISGGESLRCDVV 79
+YS+ +E G D+W+I GG L V+
Sbjct: 23 IYSSETDLEEGVFHDVWNICGGMPLAMIVI 52
>02_04_0519 +
23619084-23619198,23619468-23619559,23619655-23619735,
23620426-23620501,23620674-23620696
Length = 128
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 137 GTLAISGIFLVAKAFAVMSWLSLWKRFTLPAAV 39
G LA+ IF + ++ W S+W+ FT A +
Sbjct: 63 GLLALGNIFFLTGIGLLLGWQSMWQLFTKKANI 95
>12_02_0591 + 20864861-20867329
Length = 822
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 51 AGSCHLVSEPGDVCIR 4
AG CHL EPG V +R
Sbjct: 299 AGECHLAGEPGLVAVR 314
>04_04_1581 -
34581455-34581466,34581525-34581616,34582584-34582686,
34583761-34583837,34583913-34583959,34584494-34584594,
34584751-34584840,34585152-34585271,34586171-34586517,
34587013-34587285,34587835-34588165
Length = 530
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +1
Query: 61 LFHNDNHDITAKAFATRNM--PDIANVP 138
LFH++NHDI + R++ DIA P
Sbjct: 191 LFHSNNHDIDPEFLGNRHLHGVDIAGAP 218
>04_04_0741 + 27703869-27704186,27704278-27704337
Length = 125
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 126 DIWHISGGESLRCDVVVIVVEEIHFAGSCHLVSE 25
D W + G +L+ VVV+ +E H H S+
Sbjct: 74 DYWRLPAGATLKDVVVVVRADEAHHRDVNHFASD 107
>02_05_0422 -
28831195-28831254,28831345-28831833,28831924-28832052,
28832179-28832538
Length = 345
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 126 DIWHISGGESLRCDVVVIVVEEIHFAGSCHLVSE 25
D W + G +L+ VVV+ +E H H S+
Sbjct: 294 DYWRLPAGATLKDVVVVVRADEAHHRDVNHFASD 327
>08_01_0320 + 2853325-2853463,2853635-2853951
Length = 151
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 168 VYSATDSVEVGYISDIWHISGGESLRCDVVVIVVEEIHFAGSCHLVSEPGD 16
+ + D ++G S W S+ CDV +EE+ AG + P D
Sbjct: 89 IIATADGAKIGR-SRRWAFVNDWSVGCDVEGWAMEELRIAGGTTATTRPDD 138
>03_02_0165 + 6083059-6084252,6084664-6084741
Length = 423
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 246 QGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGESLRCDV 82
+G+ VT + V + C N +F V S E+G+ D++ + S CDV
Sbjct: 228 RGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCDV 282
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -1
Query: 273 TLEEVQLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGESL 94
T EE Q Q I+T+D +R S R ++IF + + Y + +H+ G +
Sbjct: 53 TKEEKQRIDQSEILTLDNIRTSLVRQEDSIIFSLLERAQFCYNADIYDKNAFHVDGFDGS 112
Query: 93 RCDVVVIVVEEIH 55
+ +V E++H
Sbjct: 113 LVEFMVRETEKLH 125
>12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 149 LSVAE*TICSKIRLVHQRPPLTRTSSIVT 235
L +A + K RL+HQ LT SIVT
Sbjct: 1115 LHIAIVQVSCKFRLLHQNASLTAKESIVT 1143
>11_01_0218 -
1704459-1704629,1704895-1705119,1705120-1705277,
1705378-1705463,1705574-1705823,1706220-1707246
Length = 638
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 149 LSVAE*TICSKIRLVHQRPPLTRTSSIVT 235
L +A + K RL+HQ LT SIVT
Sbjct: 501 LHIAIVQVSCKFRLLHQNASLTAKESIVT 529
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +2
Query: 170 ICSKI-RLVHQRP---PLTRTSSIVTITPW 247
IC + RL+ RP +TR++ ++T TPW
Sbjct: 210 ICQYVPRLIRIRPLYLQITRSAGVITETPW 239
>06_01_0077 + 626126-626137,626222-627421
Length = 403
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 96 LRCDVVVIVVEEIHFAGSCH 37
LRC + ++ +HFAGS H
Sbjct: 121 LRCQIPQETLQRMHFAGSSH 140
>10_08_0434 + 17896432-17896551,17896709-17896786,17898528-17898836
Length = 168
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 88 TAKAFATRNMPDIANVPNFNTV 153
T K FA + DI VP+FNT+
Sbjct: 77 TIKNFAVIYLVDITEVPDFNTM 98
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 96 LRCDVVVIVVEEIHFAGSCHLVSEPGD 16
+R D V E HF GSC+L GD
Sbjct: 279 MRADAVPRNSSEGHFCGSCNLGCPTGD 305
>08_02_0077 - 11979497-11979654,11980012-11982178
Length = 774
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 30 RQGDSCRQSESLPQR*PRHHSEGFRHQKY 116
R+ D+ +Q S + P HH+E RH++Y
Sbjct: 281 RRADAKKQKHSAME--PVHHAEENRHERY 307
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 88 TAKAFATRNMPDIANVPNFNTV 153
T K FA + DI VP+FNT+
Sbjct: 53 TIKNFAVIYLVDITEVPDFNTM 74
>01_06_1545 + 38144624-38145301
Length = 225
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 170 ICSKIRLVHQRPPLTRTSSIVTITPWT 250
ICS RL+H +P L T++ + +P++
Sbjct: 19 ICSTHRLLHPQPQLAATAASSSSSPFS 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,007,688
Number of Sequences: 37544
Number of extensions: 183079
Number of successful extensions: 480
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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