Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D05
(285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 29 0.71
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 29 0.71
AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical... 29 0.71
AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical... 29 0.71
Z78200-3|CAB01580.1| 144|Caenorhabditis elegans Hypothetical pr... 27 2.9
U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical pr... 27 2.9
AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical ... 26 3.8
Z93387-6|CAI79181.1| 331|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z74035-6|CAI79230.1| 331|Caenorhabditis elegans Hypothetical pr... 25 6.6
U80027-20|AAC48113.2| 400|Caenorhabditis elegans Hypothetical p... 25 6.6
U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf (diva... 25 6.6
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 25 6.6
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 25 6.6
AF047655-10|AAC04396.1| 335|Caenorhabditis elegans Hypothetical... 25 6.6
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 25 6.6
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z49132-3|CAA88988.1| 397|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 25 8.7
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 25 8.7
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 146 LKLGTLAISGIFLVA-KAFAVMSWLSLWKRFTLP 48
L+ TL I+GIF + SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical
protein C43D7.6 protein.
Length = 338
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 146 LKLGTLAISGIFLVA-KAFAVMSWLSLWKRFTLP 48
L+ TL I+GIF + SW+ LWK+F P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141
>AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 116 IFLVAKAFAVMSWLSLW-KRFTLPAAVTLSPNPGMCVSV 3
I+L ++SW+S W R +LPA VTL + M +++
Sbjct: 304 IYLPTYCMVLISWISFWLDRRSLPARVTLGVSSLMALTL 342
>AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 116 IFLVAKAFAVMSWLSLW-KRFTLPAAVTLSPNPGMCVSV 3
I+L ++SW+S W R +LPA VTL + M +++
Sbjct: 304 IYLPTYCMVLISWISFWLDRRSLPARVTLGVSSLMALTL 342
>Z78200-3|CAB01580.1| 144|Caenorhabditis elegans Hypothetical
protein T04H1.3 protein.
Length = 144
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 25 FGDKVTAAGKVNLFHNDNHDITAKAFATRNMPDIA 129
+ D +T KVN++H+ N++ T N+PD A
Sbjct: 79 YTDILTLDPKVNIYHSCNYNGPCSKKVTINIPDYA 113
>U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical
protein K11C4.1 protein.
Length = 308
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 117 HISGGESLRCDVVVI-VVEEIHFAGSCHLVSEPGDVCI 7
H++ G ++ + + +EE+H+ G H +PG+ C+
Sbjct: 111 HLTLGSAIGASIQCLEALEELHWCGFLHRDVKPGNFCL 148
>AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical
protein F59A7.1 protein.
Length = 458
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
Frame = +1
Query: 10 THIP----GFGDKVTAAGKVNLFHNDN 78
+H+P GFGDK T + + F+N+N
Sbjct: 237 SHLPDPRLGFGDKTTGSDSLQKFYNNN 263
>Z93387-6|CAI79181.1| 331|Caenorhabditis elegans Hypothetical
protein T02E9.6 protein.
Length = 331
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +1
Query: 52 KVNLFHNDNHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASATAA 210
K+ +HN+ + + + D + NF T G I +++D +S T +
Sbjct: 27 KIETYHNNKGNDKTFTYYVADSFDQVQLDNFKTDAGSIGSLYEDDYVSSDTCS 79
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 25.4 bits (53), Expect = 6.6
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = -1
Query: 258 QLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGESLRCDVV 79
Q S+Q I I V G T + SA E+G IS S E RC ++
Sbjct: 410 QSSIQSPINDIGNVADMFGMTDTPKPSNPAIQSAGSDFEIGLISATEGASNDEDKRCRII 469
Query: 78 -VIVVEEIHFAGSCHLVSEPGD 16
++ E+ F + +E D
Sbjct: 470 EELISSELQFISDINSYTEAVD 491
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 25.4 bits (53), Expect = 6.6
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = -1
Query: 258 QLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGESLRCDVV 79
Q S+Q I I V G T + SA E+G IS S E RC ++
Sbjct: 410 QSSIQSPINDIGNVADMFGMTDTPKPSNPAIQSAGSDFEIGLISATEGASNDEDKRCRII 469
Query: 78 -VIVVEEIHFAGSCHLVSEPGD 16
++ E+ F + +E D
Sbjct: 470 EELISSELQFISDINSYTEAVD 491
>Z74035-6|CAI79230.1| 331|Caenorhabditis elegans Hypothetical
protein T02E9.6 protein.
Length = 331
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +1
Query: 52 KVNLFHNDNHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASATAA 210
K+ +HN+ + + + D + NF T G I +++D +S T +
Sbjct: 27 KIETYHNNKGNDKTFTYYVADSFDQVQLDNFKTDAGSIGSLYEDDYVSSDTCS 79
>U80027-20|AAC48113.2| 400|Caenorhabditis elegans Hypothetical
protein T28A11.2a protein.
Length = 400
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 61 DSLCRQLSPCLRTRGC 14
D C Q +PCLRT C
Sbjct: 266 DKSCTQFTPCLRTLQC 281
>U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 2 protein.
Length = 465
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 107 VAKAFAVMSWLSLWKRFTLPAAVTLSPNPGMCV 9
V + F +SW WKR + AV ++P +C+
Sbjct: 290 VMEGFVRISWPK-WKRVLITRAVAITPTLILCI 321
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 25.4 bits (53), Expect = 6.6
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = -1
Query: 258 QLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGESLRCDVV 79
Q S+Q I I V G T + SA E+G IS S E RC ++
Sbjct: 410 QSSIQSPINDIGNVADMFGMTDTPKPSNPAIQSAGSDFEIGLISATEGASNDEDKRCRII 469
Query: 78 -VIVVEEIHFAGSCHLVSEPGD 16
++ E+ F + +E D
Sbjct: 470 EELISSELQFISDINSYTEAVD 491
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 25.4 bits (53), Expect = 6.6
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = -1
Query: 258 QLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYISDIWHISGGESLRCDVV 79
Q S+Q I I V G T + SA E+G IS S E RC ++
Sbjct: 410 QSSIQSPINDIGNVADMFGMTDTPKPSNPAIQSAGSDFEIGLISATEGASNDEDKRCRII 469
Query: 78 -VIVVEEIHFAGSCHLVSEPGD 16
++ E+ F + +E D
Sbjct: 470 EELISSELQFISDINSYTEAVD 491
>AF047655-10|AAC04396.1| 335|Caenorhabditis elegans Hypothetical
protein C17B7.2 protein.
Length = 335
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 61 DSLCRQLSPCLRTRGC 14
D C Q +PCLRT C
Sbjct: 201 DKSCTQFTPCLRTLQC 216
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 85 CRGYRCGRDSLCRQLS-PCLRTRGC 14
C G CG DSLC + PC+ T+ C
Sbjct: 935 CEGVTCGIDSLCVPTTVPCV-TKPC 958
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 76 NHDITAKAFATRNMPDIANVPNFNTVGGG 162
+H++ ++ + N+PN + VGGG
Sbjct: 19 HHNVNINQLNLNHLGQVDNIPNNSAVGGG 47
>Z49132-3|CAA88988.1| 397|Caenorhabditis elegans Hypothetical
protein ZK666.3 protein.
Length = 397
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 22 GFGDK-VTAAGKVNLFHNDNHDITAKAFATRNMPDIANV 135
G+ DK T G V +N N +TA+ ++ PDI N+
Sbjct: 78 GYSDKRSTCVGFVT--YNSNATVTAELDIAKSFPDIYNI 114
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 22 GFG-DKVTAAGKVNLFHNDNHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGAS 198
GFG D + GK + D + F + P + + +FNT GG + K GA+
Sbjct: 486 GFGGDSSNSFGKRDSGFGGPQD---QGFGDTDAPSKSGLGSFNTGGGAV----KSAFGAA 538
Query: 199 ATAAHTDFINRNDY 240
+ ++F N N +
Sbjct: 539 GFGSSSNFGNGNTF 552
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 22 GFG-DKVTAAGKVNLFHNDNHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGAS 198
GFG D + GK + D + F + P + + +FNT GG + K GA+
Sbjct: 486 GFGGDSSNSFGKRDSGFGGPQD---QGFGDTDAPSKSGLGSFNTGGGAV----KSAFGAA 538
Query: 199 ATAAHTDFINRNDY 240
+ ++F N N +
Sbjct: 539 GFGSSSNFGNGNTF 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,194,327
Number of Sequences: 27780
Number of extensions: 142055
Number of successful extensions: 387
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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