Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D04
         (594 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38707| Best HMM Match : p450 (HMM E-Value=9.3e-13)                  30   1.6  
SB_45675| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_25256| Best HMM Match : G-patch (HMM E-Value=3.7)                   27   8.6  
SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  

>SB_38707| Best HMM Match : p450 (HMM E-Value=9.3e-13)
          Length = 435

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +3

Query: 297 SKRNVVDYAYKLVRKGEIGIVRDYFPIHFRWILLGEQVKFIN 422
           S R+ +  A K  + G+ G+V+DY  + F   +LGE + FIN
Sbjct: 64  SPRSRISRAGKQPQTGKAGLVKDYGDV-FTLRILGESIVFIN 104


>SB_45675| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 217

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = -2

Query: 593 LSELLVHNFKVRPLVPPMRD----YFPRHSITLPFVFVTVRT 480
           + EL +H + VR  V P RD    Y+P  S T+   FV +RT
Sbjct: 139 ICELFLHEWNVR--VGPRRDASTVYYPCSSATMDSCFVLIRT 178


>SB_25256| Best HMM Match : G-patch (HMM E-Value=3.7)
          Length = 389

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 579 CSQFQSTPSGSTNEGLFSKTFYHSPIRFCHRTHLY 475
           C+++ +   G+TN   +  T +H  +R+ HR   Y
Sbjct: 164 CAEWGNLCDGATNCDQWGNTDFHGALRYLHRVGYY 198


>SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 787

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 348 IGIVRDYFPIHFRWILLGEQVKFINLRDANALKLEWGTDRDGDRGAYGDKNEWESDRM 521
           +G V +YF I F + +  EQV F N+ DA      + TD+ G    + +  E   D++
Sbjct: 120 VGQVLEYFSIDFEYSVRLEQVSFNNM-DARETDF-YSTDQRGFYNIFNETVETFKDKI 175


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,416,076
Number of Sequences: 59808
Number of extensions: 332722
Number of successful extensions: 789
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)