Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D03
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.5  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 411 ERLQDYCRHQQRSRSAYLPGIRSRFGGGFVQGGSRI 518
           + LQ+  R Q    +A  P + S+F  GF +  S +
Sbjct: 86  KHLQNLQRQQAAMSAATDPSVVSKFRAGFSECASEV 121


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 117 VVTIGSLFYSSRATFQRFRRKSCASN 40
           V  +GSLF SSR  F +  +K   S+
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSH 166


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 117 VVTIGSLFYSSRATFQRFRRKSCASN 40
           V  +GSLF SSR  F +  +K   S+
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSH 166


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 117 VVTIGSLFYSSRATFQRFRRKSCASN 40
           V  +GSLF SSR  F +  +K   S+
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSH 166


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 117 VVTIGSLFYSSRATFQRFRRKSCASN 40
           V  +GSLF SSR  F +  +K   S+
Sbjct: 141 VPQLGSLFRSSRMCFFKSSKKPAFSH 166


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 391 IQHLAGMKDSKTIVAINKDPE 453
           I   A +KD K   A +KDPE
Sbjct: 555 IYAFATLKDHKLAEASDKDPE 575


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 110 PSGAFSTAPEPPS 72
           PSG  ST   PPS
Sbjct: 124 PSGVISTNTSPPS 136


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/14 (35%), Positives = 7/14 (50%)
 Frame = +2

Query: 476 ITVWWRICSRRFQN 517
           + +WW  C R   N
Sbjct: 57  LKLWWEFCQRNGHN 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.138    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,859
Number of Sequences: 336
Number of extensions: 2582
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)