SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D03
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04058-1|AAA52406.1|  333|Homo sapiens ETFA protein.                  234   2e-61
BT009796-1|AAP88798.1|  333|Homo sapiens electron-transfer-flavo...   234   2e-61
BC095457-1|AAH95457.1|  333|Homo sapiens electron-transfer-flavo...   234   2e-61
BC015526-1|AAH15526.1|  333|Homo sapiens electron-transfer-flavo...   234   2e-61
AF436657-1|AAN03712.1|  333|Homo sapiens electron transfer flavo...   234   2e-61

>J04058-1|AAA52406.1|  333|Homo sapiens ETFA protein.
          Length = 333

 Score =  234 bits (572), Expect = 2e-61
 Identities = 114/176 (64%), Positives = 137/176 (77%)
 Frame = +1

Query: 4   TLEAKDPVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTS 183
           T++  + VKV +VR T+F      GGS + EKA       +++E++ Q+LTKSDRPELT 
Sbjct: 156 TVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTG 214

Query: 184 AKNIVSGGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDL 363
           AK +VSGGRGLKSG+NFKLLYDLAD+L+             FVPND+Q+GQTGKIVAP+L
Sbjct: 215 AKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPEL 274

Query: 364 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
           YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+D+G+VADLFK VPE+T  L
Sbjct: 275 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330


>BT009796-1|AAP88798.1|  333|Homo sapiens
           electron-transfer-flavoprotein, alpha polypeptide
           (glutaric aciduria II) protein.
          Length = 333

 Score =  234 bits (572), Expect = 2e-61
 Identities = 114/176 (64%), Positives = 137/176 (77%)
 Frame = +1

Query: 4   TLEAKDPVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTS 183
           T++  + VKV +VR T+F      GGS + EKA       +++E++ Q+LTKSDRPELT 
Sbjct: 156 TVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTG 214

Query: 184 AKNIVSGGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDL 363
           AK +VSGGRGLKSG+NFKLLYDLAD+L+             FVPND+Q+GQTGKIVAP+L
Sbjct: 215 AKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPEL 274

Query: 364 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
           YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+D+G+VADLFK VPE+T  L
Sbjct: 275 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330


>BC095457-1|AAH95457.1|  333|Homo sapiens
           electron-transfer-flavoprotein, alpha polypeptide
           (glutaric aciduria II) protein.
          Length = 333

 Score =  234 bits (572), Expect = 2e-61
 Identities = 114/176 (64%), Positives = 137/176 (77%)
 Frame = +1

Query: 4   TLEAKDPVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTS 183
           T++  + VKV +VR T+F      GGS + EKA       +++E++ Q+LTKSDRPELT 
Sbjct: 156 TVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTG 214

Query: 184 AKNIVSGGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDL 363
           AK +VSGGRGLKSG+NFKLLYDLAD+L+             FVPND+Q+GQTGKIVAP+L
Sbjct: 215 AKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPEL 274

Query: 364 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
           YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+D+G+VADLFK VPE+T  L
Sbjct: 275 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330


>BC015526-1|AAH15526.1|  333|Homo sapiens
           electron-transfer-flavoprotein, alpha polypeptide
           (glutaric aciduria II) protein.
          Length = 333

 Score =  234 bits (572), Expect = 2e-61
 Identities = 114/176 (64%), Positives = 137/176 (77%)
 Frame = +1

Query: 4   TLEAKDPVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTS 183
           T++  + VKV +VR T+F      GGS + EKA       +++E++ Q+LTKSDRPELT 
Sbjct: 156 TVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTG 214

Query: 184 AKNIVSGGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDL 363
           AK +VSGGRGLKSG+NFKLLYDLAD+L+             FVPND+Q+GQTGKIVAP+L
Sbjct: 215 AKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPEL 274

Query: 364 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
           YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+D+G+VADLFK VPE+T  L
Sbjct: 275 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330


>AF436657-1|AAN03712.1|  333|Homo sapiens electron transfer
           flavoprotein alpha-subunit protein.
          Length = 333

 Score =  234 bits (572), Expect = 2e-61
 Identities = 114/176 (64%), Positives = 137/176 (77%)
 Frame = +1

Query: 4   TLEAKDPVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTS 183
           T++  + VKV +VR T+F      GGS + EKA       +++E++ Q+LTKSDRPELT 
Sbjct: 156 TVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTG 214

Query: 184 AKNIVSGGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDL 363
           AK +VSGGRGLKSG+NFKLLYDLAD+L+             FVPND+Q+GQTGKIVAP+L
Sbjct: 215 AKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPEL 274

Query: 364 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
           YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+D+G+VADLFK VPE+T  L
Sbjct: 275 YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.138    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,899,821
Number of Sequences: 237096
Number of extensions: 1791947
Number of successful extensions: 4750
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4737
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

- SilkBase 1999-2023 -