Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D03
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81130-12|CAB61027.1| 332|Caenorhabditis elegans Hypothetical p... 250 7e-67
Z79695-8|CAB01967.2| 332|Caenorhabditis elegans Hypothetical pr... 250 7e-67
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical ... 27 9.1
AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical ... 27 9.1
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 27 9.1
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 27 9.1
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 27 9.1
>Z81130-12|CAB61027.1| 332|Caenorhabditis elegans Hypothetical
protein F27D4.1 protein.
Length = 332
Score = 250 bits (611), Expect = 7e-67
Identities = 119/170 (70%), Positives = 139/170 (81%)
Frame = +1
Query: 22 PVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTSAKNIVS 201
P+K++T R T+F P EGGSGAVE AP D KTDL+EF+ QEL+KS+RP+L +AK +VS
Sbjct: 163 PIKLLTFRGTSFEPAK-EGGSGAVENAPSADIKTDLSEFLGQELSKSERPDLATAKVVVS 221
Query: 202 GGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDLYIAVGI 381
GGRGLKSGDNFKL+YDLADKL +VPND+Q+GQTGKIVAP+LYIA+GI
Sbjct: 222 GGRGLKSGDNFKLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPELYIAIGI 281
Query: 382 SGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
SGAIQHLAGMKDSK IVAINKDP+APIFQV+D GL ADLFKAVPELT+ L
Sbjct: 282 SGAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLKADLFKAVPELTAAL 331
>Z79695-8|CAB01967.2| 332|Caenorhabditis elegans Hypothetical
protein F27D4.1 protein.
Length = 332
Score = 250 bits (611), Expect = 7e-67
Identities = 119/170 (70%), Positives = 139/170 (81%)
Frame = +1
Query: 22 PVKVITVRSTAFPPEPLEGGSGAVEKAPDGDYKTDLAEFVSQELTKSDRPELTSAKNIVS 201
P+K++T R T+F P EGGSGAVE AP D KTDL+EF+ QEL+KS+RP+L +AK +VS
Sbjct: 163 PIKLLTFRGTSFEPAK-EGGSGAVENAPSADIKTDLSEFLGQELSKSERPDLATAKVVVS 221
Query: 202 GGRGLKSGDNFKLLYDLADKLNXXXXXXXXXXXXXFVPNDLQIGQTGKIVAPDLYIAVGI 381
GGRGLKSGDNFKL+YDLADKL +VPND+Q+GQTGKIVAP+LYIA+GI
Sbjct: 222 GGRGLKSGDNFKLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPELYIAIGI 281
Query: 382 SGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADLFKAVPELTSKL 531
SGAIQHLAGMKDSK IVAINKDP+APIFQV+D GL ADLFKAVPELT+ L
Sbjct: 282 SGAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLKADLFKAVPELTAAL 331
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
F21G4.6 protein.
Length = 1885
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 221 DLRPRPPETIFLALVSSGLSDFVSSCDTNSARSVL 117
+ +P PE+I L LVSSGLS+ + + + VL
Sbjct: 1588 EFKPGEPESIALKLVSSGLSNDIKTVRIYTLAGVL 1622
>AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical
protein Y70D2A.1 protein.
Length = 439
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 299 TLASCQTICRLGRQAKSSRPICTSLWALAALFN 397
TL+ +C+ SR IC L+ALA +FN
Sbjct: 135 TLSQYMAVCKPFAYGLRSRKICYVLFALAYMFN 167
>AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical
protein Y70D2A.1 protein.
Length = 439
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 299 TLASCQTICRLGRQAKSSRPICTSLWALAALFN 397
TL+ +C+ SR IC L+ALA +FN
Sbjct: 135 TLSQYMAVCKPFAYGLRSRKICYVLFALAYMFN 167
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 510 NRLEQIRHQTVIGYLEDRRFWIFVDGDNSLGVF 412
N LE + H+T+I Y+ + R W + N+ F
Sbjct: 972 NELEVVVHKTIIMYMIEMRMWELIPKVNASSEF 1004
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 510 NRLEQIRHQTVIGYLEDRRFWIFVDGDNSLGVF 412
N LE + H+T+I Y+ + R W + N+ F
Sbjct: 1010 NELEVVVHKTIIMYMIEMRMWELIPKVNASSEF 1042
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 510 NRLEQIRHQTVIGYLEDRRFWIFVDGDNSLGVF 412
N LE + H+T+I Y+ + R W + N+ F
Sbjct: 972 NELEVVVHKTIIMYMIEMRMWELIPKVNASSEF 1004
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.138 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,228,417
Number of Sequences: 27780
Number of extensions: 266752
Number of successful extensions: 874
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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